Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_O19
(908 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 148 1e-36
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 142 5e-35
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 126 3e-30
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 107 2e-24
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 94 2e-20
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 84 2e-17
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 77 3e-15
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 62 1e-10
SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces po... 31 0.23
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 29 1.2
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 28 2.1
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 28 2.1
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 2.8
SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|... 27 2.8
SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2 alpha-1,... 27 4.9
SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 26 8.5
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 8.5
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 26 8.5
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 26 8.5
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 148 bits (358), Expect = 1e-36
Identities = 72/104 (69%), Positives = 77/104 (74%)
Frame = +2
Query: 188 PLGQXCYXAXXVAVTPKPLLXTFRALCTGAXGFGYKGSIFHRVIPNFMLQGGDFTNHNGT 367
PLG+ + V PK FRALCTG G+GY GS FHRVIP FMLQGGDFT NGT
Sbjct: 14 PLGRIVFKLFD-DVVPKTAA-NFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGT 71
Query: 368 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 499
GGKSIYG KF DENF LKH PG+LSMANAG +TNGSQFFITTV
Sbjct: 72 GGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTV 115
Score = 48.4 bits (110), Expect = 1e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +3
Query: 504 TSWLDGRHVVFGNVVEGMEVVKQIENL 584
T WLDG+HVVFG V EGM+VVK++E+L
Sbjct: 117 TPWLDGKHVVFGEVTEGMDVVKKVESL 143
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 538 GMLLKAWKLSSRLRTFGSQSGKXSKRIVIKDCGQI 642
G + + + ++ + GS SG RIVI CG +
Sbjct: 128 GEVTEGMDVVKKVESLGSNSGATRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 142 bits (345), Expect = 5e-35
Identities = 64/83 (77%), Positives = 71/83 (85%)
Frame = +2
Query: 254 FRALCTGAXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGP 433
FRAL TG GFGY+GSIFHRVIPNFM+QGGD T +GTGGKSIYG++F DENF L H P
Sbjct: 59 FRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRP 118
Query: 434 GVLSMANAGADTNGSQFFITTVK 502
G+LSMANAG D+NGSQFFITTVK
Sbjct: 119 GLLSMANAGPDSNGSQFFITTVK 141
Score = 40.3 bits (90), Expect = 4e-04
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 501 RTSWLDGRHVVFGNVVEGMEVVKQI 575
+T WLDG HVVFG V+ G ++VK+I
Sbjct: 141 KTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 126 bits (305), Expect = 3e-30
Identities = 65/95 (68%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 227 VTPKPLLXTFRALCTGAXGFG----YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK 394
V PK + F +LC G G YKGS FHRVI NFMLQGGDFT NGTGG+SIYG K
Sbjct: 27 VVPKTV-KNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEK 85
Query: 395 FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 499
FEDENF LKH P +LSMANAG +TNGSQFFITTV
Sbjct: 86 FEDENFELKHDKPFLLSMANAGPNTNGSQFFITTV 120
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 504 TSWLDGRHVVFGNVVEGMEVVKQIENL 584
T LDG+HVVFG V++G V+ IENL
Sbjct: 122 TPHLDGKHVVFGKVIQGKSTVRTIENL 148
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 107 bits (257), Expect = 2e-24
Identities = 54/99 (54%), Positives = 66/99 (66%), Gaps = 7/99 (7%)
Frame = +2
Query: 224 AVTPKPLLXTFRALCTGAX------GFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY 385
++ PK FR CTG GYK S FHR+I FM+QGGDF + +GTG +I+
Sbjct: 28 SIVPKTA-ENFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIF 86
Query: 386 GNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 499
++ F DENFTLKH PG+LSMANAG D+NG QFFITTV
Sbjct: 87 NSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTV 125
Score = 40.3 bits (90), Expect = 4e-04
Identities = 15/24 (62%), Positives = 22/24 (91%)
Frame = +3
Query: 510 WLDGRHVVFGNVVEGMEVVKQIEN 581
+LDG+HVVFG V+EG ++VK+IE+
Sbjct: 129 FLDGKHVVFGEVIEGYDIVKEIES 152
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 94.3 bits (224), Expect = 2e-20
Identities = 46/69 (66%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +2
Query: 290 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 466
Y G IFHRVIP+F++QGGD T G GG SIYG+KF+DE + L HTG G+LSMANAG +
Sbjct: 38 YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPN 96
Query: 467 TNGSQFFIT 493
TN SQFFIT
Sbjct: 97 TNSSQFFIT 105
Score = 37.1 bits (82), Expect = 0.003
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 504 TSWLDGRHVVFGNVVEGMEVVKQI 575
T WLDG+H +FG VV G+ V K++
Sbjct: 109 TPWLDGKHTIFGRVVSGLSVCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 84.2 bits (199), Expect = 2e-17
Identities = 42/70 (60%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +2
Query: 290 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 466
Y +IFHR+I NFM+QGGD +GTGG+SI+ FEDE + LKH P +SMAN+G +
Sbjct: 491 YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPN 549
Query: 467 TNGSQFFITT 496
TNGSQFFITT
Sbjct: 550 TNGSQFFITT 559
Score = 34.3 bits (75), Expect = 0.024
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 504 TSWLDGRHVVFGNVVEGMEVVKQIE 578
T WLDG+H +F G++VV +IE
Sbjct: 562 TPWLDGKHTIFARAYAGLDVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 77.0 bits (181), Expect = 3e-15
Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +2
Query: 290 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD 466
Y+ +IFHR I FM+QGGD + G GG+SI+G F+DE LKH G++SMAN G +
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 467 TNGSQFFI 490
TNGSQFFI
Sbjct: 371 TNGSQFFI 378
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 62.1 bits (144), Expect = 1e-10
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +2
Query: 290 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF-TLKHTGPGVLSMANAGAD 466
Y G+I HRV+P F++QGGD T G GG+SIYG F E L+ G++ MA +
Sbjct: 49 YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENE 107
Query: 467 TNGSQFFIT 493
N SQFFIT
Sbjct: 108 GNNSQFFIT 116
>SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 348
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +3
Query: 186 PHWDKXVIXLXXLPSLPSRCXKLSVPCALARKASVTRAPFSIVSSPISCCKEGTSP 353
P WD + + L + S C K V C L R V ++ + C EG P
Sbjct: 198 PSWDSYFMEMASLAAKRSNCMKRRVGCVLVRGNRVIATGYNGTPRGATNCNEGGCP 253
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Frame = -2
Query: 565 TTSMPSTTFPKTTCLPSSQEVLDSGDEELGTISISTGISHGEDARSSVLKG----EILVF 398
T P+ T P + S E ++ DE++ T ++S+ +S + S+ E L
Sbjct: 115 TQQPPTNTLPSVSASSQSVETCETVDEDIDTQTMSSDMSEVQSMEISLNCDHEFFEKLTS 174
Query: 397 KLIAVDGL--SPSAVMVGEVPSLQHEI 323
+L +V+GL ++ + L HEI
Sbjct: 175 ELQSVEGLQREQRKILFNAIDILSHEI 201
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 227 VTPKPLLXTFRALCTGAXGFGYKGSI 304
+T +L ALCTGA +GYKGSI
Sbjct: 149 ITATIILIVSTALCTGA--YGYKGSI 172
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 291 TRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTLDLASS 443
+RA S++S I KE +P+ITA SP +A S + ISP + + +S
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISPYARPGITTS 369
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 27.5 bits (58), Expect = 2.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 472 WFPVLHHHCQEPP 510
WFP +HHHC P
Sbjct: 97 WFPEVHHHCPGVP 109
>SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 162
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 561 LPCLQQHSQRQHVCHP-ARRFLTVVMKNWEPLVSA 460
L C+ +H + +CHP A +F + K P V +
Sbjct: 127 LKCMSEHPDKSLICHPLAEKFAILASKLHNPKVGS 161
>SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2
alpha-1,3-glucosyltransferase Alg12 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 546
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 85 FVGGFFVXLAFQFAHPGKMSL 147
F+G F+ FQ+A+PG ++L
Sbjct: 350 FIGSSFLLYVFQYAYPGGLAL 370
>SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 550 STTFPKTTCLPSSQEVLDSGDEELGTISISTGISH-GEDARSSVLKGEILVFKLIAV 383
S+ F T + + QEVL G +G + ++H +DA+ V I +K++ V
Sbjct: 278 SSKFNATVEVKNKQEVLHMGCYGIGVSRLIAAVAHVTKDAKGLVWPSSIAPWKVLVV 334
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 344 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 490
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 8.5
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +3
Query: 93 WVFCXFGFPICS 128
W+FC G+P+C+
Sbjct: 111 WLFCRLGYPLCA 122
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +3
Query: 522 RHVVFGNVVEGMEVVKQIENLWQPVWE 602
R +V N ++ +E + +IE W+ +W+
Sbjct: 370 RKLVIDNEIKDVEELTKIEPFWEEIWK 396
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,221,831
Number of Sequences: 5004
Number of extensions: 63872
Number of successful extensions: 203
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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