Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_O19
(908 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 151 6e-37
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 143 1e-34
09_06_0359 + 22508900-22509439 136 3e-32
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 134 1e-31
02_01_0160 + 1116160-1116678 131 6e-31
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 120 1e-27
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 119 4e-27
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 109 4e-24
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 107 1e-23
10_01_0309 + 3417602-3418147 103 1e-22
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 92 5e-19
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 91 1e-18
06_01_0214 + 1634171-1634173,1634263-1634742 90 2e-18
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 86 4e-17
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 85 6e-17
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 72 6e-13
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 70 2e-12
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 55 9e-08
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 38 0.015
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 35 0.10
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 32 0.55
02_01_0086 + 613113-613532 32 0.72
07_03_1767 + 29338867-29338912,29339261-29339325,29339571-293396... 30 2.2
12_02_0758 - 22858221-22858367,22859362-22859460,22859505-228595... 29 5.1
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 28 8.9
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 151 bits (367), Expect = 6e-37
Identities = 69/92 (75%), Positives = 77/92 (83%)
Frame = +2
Query: 227 VTPKPLLXTFRALCTGAXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE 406
V PK + FRALCTG G+GYKG FHR+I +FM+QGGDF N+NGTGG+SIYG F+DE
Sbjct: 90 VVPKTV-DNFRALCTGDKGYGYKGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYGECFDDE 148
Query: 407 NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 502
NFTLKHTGPGVLSMANAG DTNGSQFFI TVK
Sbjct: 149 NFTLKHTGPGVLSMANAGPDTNGSQFFICTVK 180
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 143 bits (347), Expect = 1e-34
Identities = 65/83 (78%), Positives = 70/83 (84%)
Frame = +2
Query: 254 FRALCTGAXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGP 433
FRALCTG GFGYKGS FHRVI +FM+QGGDF NGTGGKSIYG F+DENF L HTGP
Sbjct: 118 FRALCTGEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGP 177
Query: 434 GVLSMANAGADTNGSQFFITTVK 502
GV+SMANAG +TNGSQFFI TVK
Sbjct: 178 GVVSMANAGPNTNGSQFFICTVK 200
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +3
Query: 501 RTSWLDGRHVVFGNVVEGMEVVKQIEN 581
+T WLDGRHVVFG V+EGM++VK IE+
Sbjct: 200 KTPWLDGRHVVFGQVIEGMDIVKMIES 226
>09_06_0359 + 22508900-22509439
Length = 179
Score = 136 bits (328), Expect = 3e-32
Identities = 63/90 (70%), Positives = 70/90 (77%), Gaps = 7/90 (7%)
Frame = +2
Query: 254 FRALCTGAXGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF 412
FR LCTG G G YKGS FHR+IPNFM QGGDFT NGTGG+SIYG++F DENF
Sbjct: 38 FRCLCTGEKGLGASGKPLHYKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENF 97
Query: 413 TLKHTGPGVLSMANAGADTNGSQFFITTVK 502
L+HTGPGVLSMANAG +TNGSQFFI T +
Sbjct: 98 KLRHTGPGVLSMANAGPNTNGSQFFICTTR 127
Score = 44.0 bits (99), Expect = 2e-04
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +3
Query: 501 RTSWLDGRHVVFGNVVEGMEVVKQIENL 584
RT+WLDG+HVVFG VV+G VV+++E +
Sbjct: 127 RTTWLDGKHVVFGKVVDGYTVVEKMEQV 154
Score = 32.7 bits (71), Expect = 0.41
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 538 GMLLKAWKLSSRLRTFGSQSGKXSKRIVIKDCGQIA 645
G ++ + + ++ GS SG ++R++I+DCGQ+A
Sbjct: 139 GKVVDGYTVVEKMEQVGSGSGGTAERVLIEDCGQLA 174
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 134 bits (323), Expect = 1e-31
Identities = 63/89 (70%), Positives = 71/89 (79%), Gaps = 7/89 (7%)
Frame = +2
Query: 254 FRALCTGAXGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF 412
FRALCTG G G +KGS FHR+IP+FM+QGGDFT +G GG+SIYG KF DENF
Sbjct: 83 FRALCTGEKGTGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENF 142
Query: 413 TLKHTGPGVLSMANAGADTNGSQFFITTV 499
+KHTGPG+LSMANAG DTNGSQFFITTV
Sbjct: 143 KIKHTGPGLLSMANAGRDTNGSQFFITTV 171
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +3
Query: 504 TSWLDGRHVVFGNVVEGMEVVKQIE 578
TSWLDG+HVVFG V+ GM+VV +IE
Sbjct: 173 TSWLDGKHVVFGKVLSGMDVVYKIE 197
>02_01_0160 + 1116160-1116678
Length = 172
Score = 131 bits (317), Expect = 6e-31
Identities = 71/126 (56%), Positives = 79/126 (62%), Gaps = 7/126 (5%)
Frame = +2
Query: 143 LSQRRLSSXVTVAAAPLGQXCYXAXXVAVTPKPLLXTFRALCTGAXGFG-------YKGS 301
+S R+ +TV AP G+ V P+ FRALCTG G G YKGS
Sbjct: 1 MSNTRVFFDMTVGGAPAGRIVMELYAKDV-PRTA-ENFRALCTGEKGVGKSGKPLHYKGS 58
Query: 302 IFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQ 481
FHRVIP FM QGGDFT NGTGG+SIYG KF DE F KH PG+LSMANAG +TNGSQ
Sbjct: 59 TFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQ 118
Query: 482 FFITTV 499
FFI TV
Sbjct: 119 FFICTV 124
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3
Query: 507 SWLDGRHVVFGNVVEGMEVVKQIENL 584
SWLDG+HVVFG VVEGM+VVK IE +
Sbjct: 127 SWLDGKHVVFGRVVEGMDVVKAIEKV 152
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 496 CQEPPGWM-ADMLSLGMLLKAWKLSSRLRTFGSQSGKXSKRIVIKDCGQIA 645
C P W+ + G +++ + + GS+ G +K +VI DCGQ++
Sbjct: 122 CTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGGSTAKPVVIADCGQLS 172
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 120 bits (290), Expect = 1e-27
Identities = 59/92 (64%), Positives = 67/92 (72%), Gaps = 8/92 (8%)
Frame = +2
Query: 254 FRALCTGAXGFG--------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 409
FRALCTG G G YKGS+FHRVI FM QGGDF+N +G+GG+SIYG FEDEN
Sbjct: 39 FRALCTGEMGIGQTSKKPLYYKGSLFHRVIKGFMAQGGDFSNGDGSGGESIYGGTFEDEN 98
Query: 410 FTLKHTGPGVLSMANAGADTNGSQFFITTVKN 505
F L+H G+LSMANAG +TNGSQFFIT N
Sbjct: 99 FVLRHDERGLLSMANAGPNTNGSQFFITFKHN 130
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 119 bits (286), Expect = 4e-27
Identities = 62/118 (52%), Positives = 73/118 (61%), Gaps = 7/118 (5%)
Frame = +2
Query: 170 VTVAAAPLGQXCYXAXXVAVTPKPLLXTFRALCTGAXGFG-------YKGSIFHRVIPNF 328
+T+ P G+ V PK FRA+CTG G G YKG+ FHR+IP F
Sbjct: 46 ITINGKPAGRIVMGLFGNTV-PKTA-ENFRAICTGEKGLGKSGKPLSYKGTPFHRIIPGF 103
Query: 329 MLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVK 502
M+QGGD + NGTG SIYG F DENF + H+ PG+LSMAN DTNGSQFFITTVK
Sbjct: 104 MIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAKDTNGSQFFITTVK 161
Score = 36.3 bits (80), Expect = 0.034
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 513 LDGRHVVFGNVVEGMEVVKQIE 578
LDG+HVVFG V+ GM+VV +IE
Sbjct: 165 LDGKHVVFGKVLSGMDVVYKIE 186
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 109 bits (261), Expect = 4e-24
Identities = 50/73 (68%), Positives = 58/73 (79%)
Frame = +2
Query: 284 FGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 463
F +GS FHRVI FM+QGGD T +GTGG+SIYG KFEDENF LKH G+LSMAN+G
Sbjct: 115 FHVQGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGP 174
Query: 464 DTNGSQFFITTVK 502
+TNGSQFFITT +
Sbjct: 175 NTNGSQFFITTTR 187
Score = 39.9 bits (89), Expect = 0.003
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +3
Query: 501 RTSWLDGRHVVFGNVVEGMEVVKQIEN 581
RT LDG+HVVFG V++GM VV+ +E+
Sbjct: 187 RTPHLDGKHVVFGRVIKGMGVVRSVEH 213
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 107 bits (257), Expect = 1e-23
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2
Query: 293 KGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 472
KGS HR++ FM+QGGD T +GTGG+SIYG FEDENF LKH G+LSMANAG DTN
Sbjct: 100 KGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTN 159
Query: 473 GSQFFITTVK 502
GSQFFITT +
Sbjct: 160 GSQFFITTTR 169
Score = 39.5 bits (88), Expect = 0.004
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +3
Query: 501 RTSWLDGRHVVFGNVVEGMEVVKQIENL 584
RT LDG+HVVFG V++GM VV+ +E++
Sbjct: 169 RTPHLDGKHVVFGRVIKGMGVVRSMEHV 196
>10_01_0309 + 3417602-3418147
Length = 181
Score = 103 bits (248), Expect = 1e-22
Identities = 54/93 (58%), Positives = 59/93 (63%), Gaps = 10/93 (10%)
Frame = +2
Query: 254 FRALCTGAXG-------FGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY---GNKFED 403
FR LCTG YKGS FHRV+P FM QGGD T NGTGG+S F D
Sbjct: 43 FRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPD 102
Query: 404 ENFTLKHTGPGVLSMANAGADTNGSQFFITTVK 502
E F +KH GPGV+SMANAG +TNGSQFFIT K
Sbjct: 103 EGFAVKHDGPGVVSMANAGPNTNGSQFFITVDK 135
Score = 37.9 bits (84), Expect = 0.011
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 501 RTSWLDGRHVVFGNVVEGMEVVKQIE 578
+ WLDGRHV FG VV GM V+ I+
Sbjct: 135 KAPWLDGRHVAFGRVVAGMGAVRAID 160
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 92.3 bits (219), Expect = 5e-19
Identities = 46/69 (66%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = +2
Query: 290 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 466
Y IFHR+I +F++QGGD T G GG+SIYG KFEDE LKHTG G+LSMANAG +
Sbjct: 46 YDNVIFHRIIKDFIVQGGDPTG-TGRGGESIYGAKFEDEIRPELKHTGAGILSMANAGPN 104
Query: 467 TNGSQFFIT 493
TNGSQFFIT
Sbjct: 105 TNGSQFFIT 113
Score = 34.3 bits (75), Expect = 0.14
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3
Query: 513 LDGRHVVFGNVVEGMEVVKQI 575
LDG+H +FG V +GME+VK++
Sbjct: 120 LDGKHTIFGRVSKGMEIVKRL 140
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 91.1 bits (216), Expect = 1e-18
Identities = 49/101 (48%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Frame = +2
Query: 170 VTVAAAPLGQXCYXAXXVAVTPKPLLXTFRALCTGAX---GF--GYKGSIFHRVIPNFML 334
VT+ + P G+ + PK FR CTG G GYKG FHRVI +FM+
Sbjct: 43 VTIGSIPAGRI-KMELFADIVPKTA-ENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDFMI 100
Query: 335 QGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANA 457
QGGD+ +GTG SIYG KF+DENF KHTGPG+LSM +
Sbjct: 101 QGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRS 141
Score = 35.9 bits (79), Expect = 0.044
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +3
Query: 501 RTSWLDGRHVVFGNVV-EGMEVVKQIENL 584
+ WLD +HVVFG V+ +GM V++IEN+
Sbjct: 207 KCEWLDNKHVVFGRVLGDGMLAVRKIENV 235
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 90.2 bits (214), Expect = 2e-18
Identities = 50/84 (59%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +2
Query: 254 FRALCTGAXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTG 430
F ALC A G+ Y G+IFHR I FM+QGGD T G GG SI+G KF DE +LKH
Sbjct: 28 FLALC--ASGY-YDGTIFHRNIKGFMIQGGDPTG-TGKGGTSIWGKKFADEFRESLKHNA 83
Query: 431 PGVLSMANAGADTNGSQFFITTVK 502
GV+SMAN+G +TNGSQFFIT K
Sbjct: 84 RGVMSMANSGPNTNGSQFFITYAK 107
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 85.8 bits (203), Expect = 4e-17
Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = +2
Query: 290 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 466
Y G IFHR I NFM+QGGD T G+GG+SI+G F+DE N L H+G GV+SMAN+G
Sbjct: 381 YNGLIFHRSIKNFMIQGGDPTG-TGSGGESIWGKPFKDELNSKLIHSGRGVVSMANSGPH 439
Query: 467 TNGSQFFI 490
TNGSQFFI
Sbjct: 440 TNGSQFFI 447
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 85.4 bits (202), Expect = 6e-17
Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +2
Query: 290 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 466
Y IFHRVI FM+Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +
Sbjct: 532 YDNLIFHRVIKGFMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPN 590
Query: 467 TNGSQFFITTV 499
TNGSQFFITTV
Sbjct: 591 TNGSQFFITTV 601
Score = 43.2 bits (97), Expect = 3e-04
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 504 TSWLDGRHVVFGNVVEGMEVVKQIENL 584
T WLD +H VFG VV+GM+VV+QIE +
Sbjct: 603 TPWLDNKHTVFGRVVKGMDVVQQIEKV 629
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 72.1 bits (169), Expect = 6e-13
Identities = 38/70 (54%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Frame = +2
Query: 290 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGA- 463
Y G++FHRVI +F++QGGD T +GTGG+SIYG F DE T L+ G+++ ANAG
Sbjct: 49 YDGTLFHRVIKSFLVQGGDPTG-SGTGGESIYGAPFADEFHTRLRFNHRGLVACANAGTP 107
Query: 464 DTNGSQFFIT 493
+NGSQFFI+
Sbjct: 108 HSNGSQFFIS 117
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 70.1 bits (164), Expect = 2e-12
Identities = 44/99 (44%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Frame = +2
Query: 227 VTPKPLLXTFRALCTGAXGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY 385
V PK + FRALCTG G G YKGS FHR+IP FM+QGGD +G G
Sbjct: 62 VVPKTVA-NFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVRGDGKG----- 115
Query: 386 GNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVK 502
V++MAN+G D+NGSQF+ITT+K
Sbjct: 116 ----------------SVIAMANSGPDSNGSQFYITTIK 138
Score = 43.2 bits (97), Expect = 3e-04
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 501 RTSWLDGRHVVFGNVVEGMEVVKQIE 578
+TSWLDG HVVFG V++GM+ V IE
Sbjct: 138 KTSWLDGEHVVFGRVIQGMDYVYAIE 163
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 54.8 bits (126), Expect = 9e-08
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 8/76 (10%)
Frame = +2
Query: 290 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY----GNK---FEDE-NFTLKHTGPGVLS 445
Y G +FH+V +F+ Q GD T G GG S+Y G++ F+DE L+H+ G ++
Sbjct: 37 YNGCLFHKVEKDFLAQTGDPTG-TGAGGDSVYKFLYGDQARFFDDEIRPDLRHSKKGTIA 95
Query: 446 MANAGADTNGSQFFIT 493
MA+AG + N SQF+IT
Sbjct: 96 MASAGENCNASQFYIT 111
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 37.5 bits (83), Expect = 0.015
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 290 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGAD 466
+KG F VI NF++QGGDF + NG + I K EN + KH + + N +
Sbjct: 130 FKGMPFRHVIKNFVIQGGDF-DFNGAAQEWILKAKASGENALSPKHEAFMIGTTKN--PN 186
Query: 467 TNGSQFFITT 496
G FITT
Sbjct: 187 NKGFDLFITT 196
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 34.7 bits (76), Expect = 0.10
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +2
Query: 395 FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT 493
F+DE + L+H+ G ++MA+AG + N SQF+IT
Sbjct: 108 FDDEIHPELRHSKMGTIAMASAGENCNASQFYIT 141
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 510 WLDGRHVVFGNVVEGMEVVKQIENLW 587
+LD +H VFG V EG + + +I +
Sbjct: 148 YLDDKHTVFGMVAEGFDTITKINETY 173
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 32.3 bits (70), Expect = 0.55
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
Frame = +2
Query: 227 VTPKPLLXTFRALCTGAXGFG--------YKGSIFHRVIPNFMLQ 337
V PK FRALCTG G G +KG+ HR++ FM Q
Sbjct: 32 VVPKTT-ENFRALCTGERGLGVSTQKPLYFKGTNMHRILKGFMAQ 75
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 522 RHVVFGNVVEGMEVVKQIE 578
+HVVFG VV GM ++K++E
Sbjct: 94 KHVVFGKVVTGMPLLKKLE 112
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 538 GMLLKAWKLSSRLRTFGSQSGKXSKRIVIKDCGQIA 645
G ++ L +L GS +GK + + I DCG+++
Sbjct: 99 GKVVTGMPLLKKLEAVGSDTGKPTCEVKIVDCGEVS 134
>02_01_0086 + 613113-613532
Length = 139
Score = 31.9 bits (69), Expect = 0.72
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 501 RTSWLDGRHVVFGNVVEGMEVVKQIE 578
R W DG +VVFG ++ G +K IE
Sbjct: 90 RVPWFDGNYVVFGCIISGFHNLKAIE 115
>07_03_1767 +
29338867-29338912,29339261-29339325,29339571-29339642,
29339913-29339956,29340047-29340158,29340879-29340950,
29341449-29341511,29341957-29342034,29342110-29342202,
29342294-29342413,29342762-29342845,29343094-29343309,
29343401-29343448,29343761-29343871,29344170-29344267,
29345004-29345248,29345764-29345832,29345919-29345983,
29346168-29346337,29346434-29346512,29346614-29346869,
29347416-29347461,29347602-29347710,29347820-29347882,
29350075-29350107,29350924-29351442
Length = 991
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -2
Query: 544 TFPKTTCLPSSQEVLDSGDEELGTISISTGISHGE--DARSSVLKGEILVFKLIAVDGLS 371
T P +T + S+E L + T++ + G+ DA +V GEIL+ ++ V G++
Sbjct: 743 TPPPSTIM--SEEALQKCKSCIETLANTLGLEGFSRIDAFVNVQNGEILLIEVNTVPGMT 800
Query: 370 PSAVMVGEV 344
PS V++ ++
Sbjct: 801 PSTVLIHQI 809
>12_02_0758 -
22858221-22858367,22859362-22859460,22859505-22859557,
22859674-22859728,22860204-22860284,22860779-22861213
Length = 289
Score = 29.1 bits (62), Expect = 5.1
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = +3
Query: 87 CWWVFCXFGFP-ICSSRQNVSPNXVFLRXSL-LPLPHWDKXVIXLXXLPSLPSRCXKLSV 260
CWW + + +S SP F +L P H+ L +LP+ C +
Sbjct: 28 CWWGYSVSAASAVTASALLASPVPRFQNPNLQAPAAHYTST--PLTSCHTLPAACNGTTS 85
Query: 261 PCALARKASVTRAPFSIVSSPISCC-KEGTSPTITALGESPSTAISLK 401
P A T P + +SSP + KE +P + A+ + S S +
Sbjct: 86 PVLSAPPGGRTSLPCATISSPQALSRKETWTPYLLAVATNSSIGNSTR 133
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 472 ISISTGISHGEDARSSVLKGEILVF 398
++I T I HG D R+S L GE LVF
Sbjct: 119 LAILTAIFHGVDPRTSFLIGEGLVF 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,248,279
Number of Sequences: 37544
Number of extensions: 482609
Number of successful extensions: 1239
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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