Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_O15
         (1138 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0125 + 970746-970967,971126-971226,971897-972026,972108-97...    30   3.0  
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249...    30   3.9  

>06_01_0125 +
           970746-970967,971126-971226,971897-972026,972108-972333,
           972400-972502,972519-972594,972710-973333
          Length = 493

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 23/67 (34%), Positives = 27/67 (40%)
 Frame = -3

Query: 686 QGGPRXGXEXGXHSXGGXXGSRVXSFXGXXGIXEAXXKRXCXGGRGNAGSSEGXXGDGXK 507
           +GGP  G + G H  GG  G       G  G       R   GGRG  G   G  GDG +
Sbjct: 14  EGGP--GGDGGPHGIGGSGGDGGCGGVGGLG---RKGGRGGHGGRGGNGGFGG--GDGGR 66

Query: 506 XEXXGKG 486
               G+G
Sbjct: 67  SGDGGEG 73


>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
            27125387-27125656,27126027-27126377,27126480-27126757,
            27126887-27128330
          Length = 1398

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
 Frame = -1

Query: 781  GXXGXGKRXAQGDIXXSXSXXGRGGX--VXXXXNRAGPGX-GXRXGDTAWGGXEXPG 620
            G  G G R   G         G GG         R GPG  G R G   +GG E PG
Sbjct: 1026 GPGGFGGRDGPGGFGGRDGPGGFGGRDGPGGFIGREGPGGFGGREGPVGFGGQESPG 1082


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,332,182
Number of Sequences: 37544
Number of extensions: 214923
Number of successful extensions: 312
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3444772820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)