Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_O13
(1060 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 44 2e-04
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 36 0.041
03_05_0067 - 20460206-20460703,20461255-20461530 33 0.067
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 33 0.29
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.38
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 32 0.88
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 32 0.88
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 1.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.5
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 31 1.5
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 2.0
01_03_0005 + 11568545-11569119,11569179-11569191 30 2.7
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 30 3.6
07_01_0080 + 587674-588510 30 3.6
07_01_0479 + 3606663-3607448 29 6.2
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 6.2
12_02_1174 - 26696869-26698191 29 8.2
01_07_0082 - 40965947-40967023 29 8.2
01_01_0715 - 5542648-5543219,5543352-5543544 29 8.2
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 44.4 bits (100), Expect = 2e-04
Identities = 26/84 (30%), Positives = 26/84 (30%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGX 307
PPPP PPP PP K G PPP K PPPP G
Sbjct: 314 PPPPPPKPAAAAPPP-PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Query: 306 NFXXPXAXKXWGGXYXPKXXPXPP 235
P GG P P P
Sbjct: 373 KKGGPPPPPPKGGASRPPAAPGVP 396
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 36.3 bits (80), Expect = 0.041
Identities = 23/84 (27%), Positives = 26/84 (30%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGX 307
PPPP GG PP PP + PPP + PPP G
Sbjct: 1123 PPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPA-GFRGGTPPPNAHGG 1181
Query: 306 NFXXPXAXKXWGGXYXPKXXPXPP 235
P + GG P P P
Sbjct: 1182 VAPPPPPPRGHGGVGGPPTPPGAP 1205
Score = 31.9 bits (69), Expect = 0.88
Identities = 26/93 (27%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPX-FXKKXKXPPPPXXG 310
PP P G GG PP PP GG PPP PPPP
Sbjct: 1136 PPAPPLPEGIGGVPPPPPVGGLG---GPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGH 1192
Query: 309 XNFXXPXAXKXWGGXYXPKXXPXPPPXFFXGXG 211
P P P PP G G
Sbjct: 1193 GGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRG 1225
Score = 30.3 bits (65), Expect = 2.7
Identities = 30/102 (29%), Positives = 30/102 (29%), Gaps = 7/102 (6%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGX 307
PPPP G G PPP PP PP PPPP G
Sbjct: 1099 PPPPSI--GAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGG 1156
Query: 306 NFXXPXAXKXWG--GXYXPK-----XXPXPPPXFFXGXGXGG 202
P G G P P PPP G G GG
Sbjct: 1157 LGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHG-GVGG 1197
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPP 325
PPPP GG G PP PP GG PPP + PP
Sbjct: 1185 PPPPPRGHGGVGGPPTPP--------GAPAPPMPPGVPGGPPPPPGGRGLPAPP 1230
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 32.7 bits (71), Expect(2) = 0.067
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -2
Query: 372 GGXPPPXFXKKXKXPPPPXXGXNFXXPXAXKXWGGXYXPKXXPXPPP 232
G PPP + + PPPP P A WG P+ P P P
Sbjct: 13 GPPPPPQYFQAGPPPPPPQYFQGAHPPAA--MWGQPPPPQAAPPPAP 57
Score = 21.8 bits (44), Expect(2) = 0.067
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPP 442
PPPP G PPP
Sbjct: 4 PPPPPQWAMGPPPPP 18
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 33.5 bits (73), Expect = 0.29
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKK----XKXPPPP 319
PPPP G PPP PP + + G PPP K PPPP
Sbjct: 114 PPPPHLLHYYGHPPPPPPPPPPFKGDHYGGVYQNWQQNGPPPPPDHVLKKVPSHPSPPPP 173
Query: 318 XXGXNFXXPXAXKXWGG 268
N + + G
Sbjct: 174 PAPLNVHSGGSGSNYSG 190
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.1 bits (72), Expect = 0.38
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXP-PPPXXG 310
PPPP G P P PP + + G P P K P PPP G
Sbjct: 750 PPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPHPPSSKGLNAPAPPPLLG 809
Score = 29.9 bits (64), Expect = 3.6
Identities = 23/85 (27%), Positives = 23/85 (27%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGX 307
PP P PPP PP R PP PPPP
Sbjct: 592 PPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPP-----PPPPPPPSLP 646
Query: 306 NFXXPXAXKXWGGXYXPKXXPXPPP 232
N P G P P PPP
Sbjct: 647 NRLVPPPPAPGIGNKFPAPPPPPPP 671
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 31.9 bits (69), Expect = 0.88
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -2
Query: 456 GGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGXNFXXPXAXKX 277
G PPP PP PPP PPPP G P
Sbjct: 421 GAPPPPPPGS------YAPVPWGQPPPYASYPPPPPGSSMYNPPPPAPGQATPPP----- 469
Query: 276 WGGXYXPKXXPXPPP 232
+G Y P P PPP
Sbjct: 470 YGVQYAPPPAPIPPP 484
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.9 bits (69), Expect = 0.88
Identities = 23/85 (27%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGX 307
PP G G PPP P G PPP P PP G
Sbjct: 309 PPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGP 368
Query: 306 N-FXXPXAXKXWGGXYXPKXXPXPP 235
P A GG P P P
Sbjct: 369 GPPPPPGAAGRGGGGPPPPALPGGP 393
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 31.1 bits (67), Expect = 1.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXR 415
PPPP GG PPP PP R
Sbjct: 930 PPPPPPGKPGGPPPPPPPPGSLPR 953
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP GGPPP PP
Sbjct: 929 PPPPPPPGKPGGPPPPPP 946
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.1 bits (67), Expect = 1.5
Identities = 25/85 (29%), Positives = 27/85 (31%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGX 307
PPPP GG PP PP G PPP PPPP G
Sbjct: 11 PPPPQ----GGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAP----PPPPPPGP 62
Query: 306 NFXXPXAXKXWGGXYXPKXXPXPPP 232
P + G P+ PPP
Sbjct: 63 --PPPHQPQFNFGPGPPQQQQPPPP 85
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Frame = -2
Query: 486 PPPPXXXXGGG-----GPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPP 322
PPPP GGG GPPP PP + G PP + PP
Sbjct: 18 PPPPQAGGGGGGEFYRGPPPQPPMRQLSAASSTNIPGDYAAHQGHPPP-----QQNQPPY 72
Query: 321 PXXGXNF 301
G NF
Sbjct: 73 DAYGDNF 79
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP GGPPP PP
Sbjct: 624 PPPPPPPGKPGGPPPPPP 641
Score = 25.8 bits (54), Expect(2) = 6.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXK 424
PPPP G PPP PP K
Sbjct: 614 PPPPPRPP--GAPPPPPPPGK 632
Score = 21.4 bits (43), Expect(2) = 6.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -2
Query: 363 PPPXFXKKXKXPPPP 319
PPP K PPPP
Sbjct: 626 PPPPPGKPGGPPPPP 640
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Frame = +1
Query: 202 PPRPXPXEKXGGWXXXXFWXITPPPXFXGXGXGK-------IXPPPXGGG 330
PP P GG +PPP + G G G PPP GGG
Sbjct: 71 PPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGG 120
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 7/55 (12%)
Frame = +3
Query: 189 PXFXXPPXXXXGKXXGVGXXXXLXNNXPPXFXGPGGRXNS-------PPXXGGGG 332
P PP G G G + + PP + G GG ++ PP GGGG
Sbjct: 67 PQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGG 121
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/88 (27%), Positives = 28/88 (31%), Gaps = 4/88 (4%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPP----XPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPP 319
PPP GGGG PP PP + G PPP + PPPP
Sbjct: 6 PPPQAGVAGGGGAPPQWGAIPPPVPHQQ---QQYAPPPPQMWGQAPPPPPQMWGQAPPPP 62
Query: 318 XXGXNFXXPXAXKXWGGXYXPKXXPXPP 235
P +G P+ P P
Sbjct: 63 QPAYGQPPPAQAGYYGA--PPQAAPAVP 88
>07_01_0080 + 587674-588510
Length = 278
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP G PPP PP
Sbjct: 92 PPPPPPPPSSGSPPPPPP 109
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP G PPP PP
Sbjct: 93 PPPPPPPSSGSPPPPPPP 110
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPP 319
PPPP G PP PP + G PPP F + PPPP
Sbjct: 201 PPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRP-----GMPPPPF-RPGMPPPPP 250
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.1 bits (62), Expect = 6.2
Identities = 21/73 (28%), Positives = 24/73 (32%)
Frame = -3
Query: 485 PPPXXXXXGGGAXPXTPXLXKXPXXKKNLFXGXXXXXXXXXPPRFFXKKXKXPPPXGGGX 306
PPP G G+ P P P + G PP + P P GGG
Sbjct: 338 PPPSSYGGGPGSYP--PSYGAPPPNPP--YSGGAPGGQGSLPPSYDGGYGGRPMPGGGGP 393
Query: 305 IXPXPXPXKXGGG 267
P P GGG
Sbjct: 394 GAPPPYHGGGGGG 406
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 8.2
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 1/86 (1%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGX 307
P PP PPP PP + PPP PPPP
Sbjct: 146 PQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKP------QPPPSLQPPSPPPPPPTRPP 199
Query: 306 NFXXPXA-XKXWGGXYXPKXXPXPPP 232
+ P K P P PPP
Sbjct: 200 SVKPPVVQPKPQPPPTLPPPSPPPPP 225
>01_07_0082 - 40965947-40967023
Length = 358
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 372 GGXPPPXFXKKXKX-PPPPXXGXNFXXPXAXKXWGGXY 262
G PPP + PPPP G + P +GG Y
Sbjct: 253 GTAPPPQYGYGYPAQPPPPQAGYGYPPPPPQAGYGGGY 290
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 2/67 (2%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXR--XXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXX 313
PPPP P P PP G PPP PPPP
Sbjct: 145 PPPPPTVPAAPTPRPSPPPPAAGTNGTARAPSPPVPAPAPAGSPPP--------PPPPPA 196
Query: 312 GXNFXXP 292
G NF P
Sbjct: 197 GGNFTAP 203
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,746,692
Number of Sequences: 37544
Number of extensions: 607869
Number of successful extensions: 25582
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8060
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3141165724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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