Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_O13
(1060 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.037
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.037
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.037
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 36 0.049
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 35 0.085
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 35 0.085
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.15
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.15
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.15
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.60
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.60
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.60
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.2
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.037
Identities = 27/88 (30%), Positives = 28/88 (31%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGX 307
PPPP GGPPP PP GG PP PPPP G
Sbjct: 714 PPPPGLPPITGGPPPPPP---PGGLPPITGGPPPPPPPGGLPP---ISGGPPPPPPPPGG 767
Query: 306 NFXXPXAXKXWGGXYXPKXXPXPPPXFF 223
P G + P PPP F
Sbjct: 768 --CPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.037
Identities = 27/88 (30%), Positives = 28/88 (31%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGX 307
PPPP GGPPP PP GG PP PPPP G
Sbjct: 714 PPPPGLPPITGGPPPPPP---PGGLPPITGGPPPPPPPGGLPP---ISGGPPPPPPPPGG 767
Query: 306 NFXXPXAXKXWGGXYXPKXXPXPPPXFF 223
P G + P PPP F
Sbjct: 768 --CPPPPPPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.037
Identities = 27/88 (30%), Positives = 28/88 (31%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGX 307
PPPP GGPPP PP GG PP PPPP G
Sbjct: 297 PPPPGLPPITGGPPPPPP---PGGLPPITGGPPPPPPPGGLPP---ISGGPPPPPPPPGG 350
Query: 306 NFXXPXAXKXWGGXYXPKXXPXPPPXFF 223
P G + P PPP F
Sbjct: 351 --CPPPPPPPPPGGFKGGPPPPPPPGMF 376
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 35.9 bits (79), Expect = 0.049
Identities = 23/67 (34%), Positives = 23/67 (34%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXGX 307
PPPP GGPPP PP GG PPP PPPP
Sbjct: 539 PPPPPVGMANGGPPPPPP---LPLDLLKGAVAGLKSVPGGPPPP------PPPPPPSFMF 589
Query: 306 NFXXPXA 286
N P A
Sbjct: 590 NGKVPNA 596
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 35.1 bits (77), Expect = 0.085
Identities = 29/102 (28%), Positives = 32/102 (31%), Gaps = 7/102 (6%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPX--PPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXX 313
PPPP GGPPP P G PPP + PPPP
Sbjct: 681 PPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQP 740
Query: 312 GXNFXXPXA--XKXWGGXYXP---KXXPXPPPXFFXGXGXGG 202
G + P G Y P + P PP G GG
Sbjct: 741 GHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPGGHHEGGDGG 782
Score = 28.7 bits (61), Expect = 7.4
Identities = 21/81 (25%), Positives = 25/81 (30%), Gaps = 4/81 (4%)
Frame = -2
Query: 462 GGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXP----PPXFXKKXKXPPPPXXGXNFXX 295
GGG PP PP + G P PP + PPPP +
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGY 734
Query: 294 PXAXKXWGGXYXPKXXPXPPP 232
P + G Y PPP
Sbjct: 735 PPPPQP-GHPYQQPYGQMPPP 754
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 35.1 bits (77), Expect = 0.085
Identities = 29/102 (28%), Positives = 32/102 (31%), Gaps = 7/102 (6%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPX--PPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXX 313
PPPP GGPPP P G PPP + PPPP
Sbjct: 681 PPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQP 740
Query: 312 GXNFXXPXA--XKXWGGXYXP---KXXPXPPPXFFXGXGXGG 202
G + P G Y P + P PP G GG
Sbjct: 741 GHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPGGHHEGGDGG 782
Score = 28.7 bits (61), Expect = 7.4
Identities = 21/81 (25%), Positives = 25/81 (30%), Gaps = 4/81 (4%)
Frame = -2
Query: 462 GGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXP----PPXFXKKXKXPPPPXXGXNFXX 295
GGG PP PP + G P PP + PPPP +
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGY 734
Query: 294 PXAXKXWGGXYXPKXXPXPPP 232
P + G Y PPP
Sbjct: 735 PPPPQP-GHPYQQPYGQMPPP 754
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.15
Identities = 27/93 (29%), Positives = 28/93 (30%), Gaps = 8/93 (8%)
Frame = -2
Query: 486 PPPPXXXX---GGGGPPPXP-----PXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKX 331
PPPP G G PPP P P + GG PPP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP-RAGSPP 298
Query: 330 PPPPXXGXNFXXPXAXKXWGGXYXPKXXPXPPP 232
PPPP G GG P PPP
Sbjct: 299 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.15
Identities = 27/93 (29%), Positives = 28/93 (30%), Gaps = 8/93 (8%)
Frame = -2
Query: 486 PPPPXXXX---GGGGPPPXP-----PXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKX 331
PPPP G G PPP P P + GG PPP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP-RAGSPP 319
Query: 330 PPPPXXGXNFXXPXAXKXWGGXYXPKXXPXPPP 232
PPPP G GG P PPP
Sbjct: 320 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.15
Identities = 27/93 (29%), Positives = 28/93 (30%), Gaps = 8/93 (8%)
Frame = -2
Query: 486 PPPPXXXX---GGGGPPPXP-----PXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKX 331
PPPP G G PPP P P + GG PPP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP-RAGSPP 304
Query: 330 PPPPXXGXNFXXPXAXKXWGGXYXPKXXPXPPP 232
PPPP G GG P PPP
Sbjct: 305 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 32.3 bits (70), Expect = 0.60
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP G G PPP PP
Sbjct: 235 PPPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.60
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP G G PPP PP
Sbjct: 221 PPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.60
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP G G PPP PP
Sbjct: 221 PPPPLPPVGAGAPPPPPP 238
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPP 319
PPPP GG PP PP + R PP + + PP P
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPM--TPPSPQRRPPRTPPSP 178
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP GG PPP PP
Sbjct: 579 PPPPPPMLGGPPPPPPPP 596
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP GG PPP PP
Sbjct: 578 PPPPPPPMLGGPPPPPPP 595
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP GGPPP PP
Sbjct: 577 PPPPPPPPMLGGPPPPPP 594
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP G PPP PP
Sbjct: 564 PPPPLPQNLSGAPPPPPP 581
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPPXXG 310
PPPP G GG PP PP GG PPP PPPP G
Sbjct: 75 PPPP----GPGGIPPPPPMFAGG-------IPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP GG PPP PP
Sbjct: 336 PPPPGMRYPGGMPPPPPP 353
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -2
Query: 360 PPXFXKKXKXPPPPXXGX--NFXXPXAXKXWGGXYXPKXXPXPPPXFFXGXGXGG 202
PP + PPPP G P + G P P PPP F G GG
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 332
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP GG PPP PP
Sbjct: 346 PPPPGMRYPGGMPPPPPP 363
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -2
Query: 360 PPXFXKKXKXPPPPXXGX--NFXXPXAXKXWGGXYXPKXXPXPPPXFFXGXGXGG 202
PP + PPPP G P + G P P PPP F G GG
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 342
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP G PPP PP
Sbjct: 796 PPPPLPPISSGAPPPPPP 813
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 486 PPPPXXXXGGGGPPPXPP 433
PPPP G PPP PP
Sbjct: 796 PPPPLPPISSGAPPPPPP 813
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = -2
Query: 486 PPPPXXXXGGG--GPPPXPP 433
PPPP GGG PPP PP
Sbjct: 40 PPPPPPPCGGGYEAPPPPPP 59
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = -2
Query: 486 PPPPXXXXGGGGPP---PXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPP 319
PPPP G G PP P PP GG PP F PPPP
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFF-----PPPPP 358
Score = 28.3 bits (60), Expect = 9.8
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 8/54 (14%)
Frame = -2
Query: 363 PPPXFXKKXKXPP----PPXXGXN----FXXPXAXKXWGGXYXPKXXPXPPPXF 226
PPP F + PP PP G F P + G P P PPP F
Sbjct: 307 PPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHF 360
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = -2
Query: 486 PPPPXXXXGGGGPP---PXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPPP 319
PPPP G G PP P PP GG PP F PPPP
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFF-----PPPPP 358
Score = 28.3 bits (60), Expect = 9.8
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 8/54 (14%)
Frame = -2
Query: 363 PPPXFXKKXKXPP----PPXXGXN----FXXPXAXKXWGGXYXPKXXPXPPPXF 226
PPP F + PP PP G F P + G P P PPP F
Sbjct: 307 PPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHF 360
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = -2
Query: 486 PPPPXXXXGGGGPP---PXPPXXKXXRXXXXXXXXXXXXKXGGXPPPXFXKKXKXPPP 322
PPPP G GP P PP GG PPP F ++ PP
Sbjct: 756 PPPPFGR--GAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGPP 811
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,438,054
Number of Sequences: 27780
Number of extensions: 277292
Number of successful extensions: 5851
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1974
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2824804260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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