Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_O10
(880 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprot... 105 6e-23
AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p pro... 105 6e-23
AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA... 105 6e-23
BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p pro... 36 0.056
AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-P... 36 0.056
BT003597-1|AAO39600.1| 94|Drosophila melanogaster GM19936p pro... 32 1.2
AE014134-1360|AAF52576.1| 94|Drosophila melanogaster CG18591-P... 32 1.2
AE013599-3518|AAN16119.1| 281|Drosophila melanogaster CG32834-P... 31 1.6
>L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprotein
protein.
Length = 199
Score = 105 bits (253), Expect = 6e-23
Identities = 59/115 (51%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Frame = +3
Query: 222 KAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTI--XXXXXXX 395
KAFDKHMNLILGDCEEFRKI+SKNSK +REEKR LGFVLLRGENIVSLT+
Sbjct: 32 KAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEGPPPPEEG 91
Query: 396 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVGGPSQQHMAPGNRG 560
RGVGGP+QQHMAP RG
Sbjct: 92 LPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMGRG 146
Score = 41.1 bits (92), Expect = 0.002
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1
Query: 127 MTIGKNNKMQQHINYRVRVI 186
MTIGKNNKM QH+NYRVR++
Sbjct: 1 MTIGKNNKMIQHLNYRVRIV 20
>AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p
protein.
Length = 199
Score = 105 bits (253), Expect = 6e-23
Identities = 59/115 (51%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Frame = +3
Query: 222 KAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTI--XXXXXXX 395
KAFDKHMNLILGDCEEFRKI+SKNSK +REEKR LGFVLLRGENIVSLT+
Sbjct: 32 KAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEGPPPPEEG 91
Query: 396 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVGGPSQQHMAPGNRG 560
RGVGGP+QQHMAP RG
Sbjct: 92 LPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMGRG 146
Score = 41.1 bits (92), Expect = 0.002
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1
Query: 127 MTIGKNNKMQQHINYRVRVI 186
MTIGKNNKM QH+NYRVR++
Sbjct: 1 MTIGKNNKMIQHLNYRVRIV 20
>AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA
protein.
Length = 199
Score = 105 bits (253), Expect = 6e-23
Identities = 59/115 (51%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Frame = +3
Query: 222 KAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTI--XXXXXXX 395
KAFDKHMNLILGDCEEFRKI+SKNSK +REEKR LGFVLLRGENIVSLT+
Sbjct: 32 KAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEGPPPPEEG 91
Query: 396 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVGGPSQQHMAPGNRG 560
RGVGGP+QQHMAP RG
Sbjct: 92 LPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMGRG 146
Score = 41.1 bits (92), Expect = 0.002
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1
Query: 127 MTIGKNNKMQQHINYRVRVI 186
MTIGKNNKM QH+NYRVR++
Sbjct: 1 MTIGKNNKMIQHLNYRVRIV 20
>BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p
protein.
Length = 103
Score = 36.3 bits (80), Expect = 0.056
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +3
Query: 225 AFDKHMNLILGDCEE---FRKIKSKNSKTADREEKRTLGFVLLRGENIV 362
AFD+H+N++LGD EE +I + + + KRT+ + +RG+ ++
Sbjct: 46 AFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPMLFVRGDGVI 94
>AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-PA
protein.
Length = 103
Score = 36.3 bits (80), Expect = 0.056
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +3
Query: 225 AFDKHMNLILGDCEE---FRKIKSKNSKTADREEKRTLGFVLLRGENIV 362
AFD+H+N++LGD EE +I + + + KRT+ + +RG+ ++
Sbjct: 46 AFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPMLFVRGDGVI 94
>BT003597-1|AAO39600.1| 94|Drosophila melanogaster GM19936p
protein.
Length = 94
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +3
Query: 228 FDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENI 359
FD++MNL+L D EE +K++ ++R LG ++L+G+NI
Sbjct: 49 FDEYMNLVLDDAEEV-YVKTR--------QRRNLGRIMLKGDNI 83
>AE014134-1360|AAF52576.1| 94|Drosophila melanogaster CG18591-PA
protein.
Length = 94
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +3
Query: 228 FDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENI 359
FD++MNL+L D EE +K++ ++R LG ++L+G+NI
Sbjct: 49 FDEYMNLVLDDAEEV-YVKTR--------QRRNLGRIMLKGDNI 83
>AE013599-3518|AAN16119.1| 281|Drosophila melanogaster CG32834-PA
protein.
Length = 281
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 593 PHDG-WPSSRNDGSSSWHGSWWAR 661
P DG W + GS+SW GSWW R
Sbjct: 138 PDDGSWCTVSGWGSTSWWGSWWDR 161
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,420,975
Number of Sequences: 53049
Number of extensions: 485293
Number of successful extensions: 1281
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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