Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_O08
         (902 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   5.5  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +3

Query: 564 RRPNDRQWLLCGLEL---LMSMDDCGHLPTGEPYSAFHVCVGSN**PNRLV 707
           R+ ND Q LL   +L   ++++ D GH      +++ H   G N  PN L+
Sbjct: 441 RKDNDIQELLYDHDLSEHVITVQDWGHEQGVSLFASHHHSTGDNKPPNLLI 491



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 180 RHTPKAXCCRVCSFXTCQ 233
           +H  +  CCRVC++   Q
Sbjct: 242 QHIVERDCCRVCNYTEAQ 259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,931
Number of Sequences: 2352
Number of extensions: 16655
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)