Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_O05
(896 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 78 2e-15
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 77 3e-15
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 70 5e-13
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 70 5e-13
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 68 2e-12
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 68 2e-12
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 62 8e-11
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 60 4e-10
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 59 7e-10
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 59 7e-10
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 53 6e-08
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 53 6e-08
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 46 7e-06
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 44 2e-05
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 43 5e-05
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 37 0.004
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 36 0.010
SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|ch... 30 0.51
SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharom... 27 3.6
SPAC23C11.14 |zhf1|zhf, zhf|zinc ion transporter Zhf1|Schizosacc... 27 4.8
SPBC776.06c |||spindle pole body interacting protein |Schizosacc... 26 6.3
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 8.4
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 8.4
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 77.8 bits (183), Expect = 2e-15
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 5/173 (2%)
Frame = +3
Query: 183 FSKLSAQLVLVGRKENNLRRIALYCEKSKGIKPFTITADVTDDGDTQRIINETIEHYGKL 362
+S+ Q +VGR E +L+ +KG + ADV D + I E++E +
Sbjct: 21 WSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQSDMKNLKSIFESVE----I 76
Query: 363 DVLINNAGVIGMGGIKNSTMETYDDVMSTNLRSVYRLTMLAVPHLIQTKGC-----IVNL 527
D +++ AGV+ ++ + D ++ TNL S +L+ +A+ + K I+N+
Sbjct: 77 DTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKMAILEWFRNKNSERDRLILNI 136
Query: 528 SCIAGTKPSTMALAYNISKAALDHFTKCVALELAPDGIRVNSVNPGFVKTNLL 686
S T Y SKA L+ FTK +A E+A GIRVN+++PG+V T +L
Sbjct: 137 SSRLSTYALPGTSVYAASKAGLESFTKVLAAEVASKGIRVNAISPGYVDTPML 189
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 77.0 bits (181), Expect = 3e-15
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 2/135 (1%)
Frame = +3
Query: 285 TITADVTDDGDTQRIINETIEHY--GKLDVLINNAGVIGMGGIKNSTMETYDDVMSTNLR 458
T+ DVTD+ D+ R + + + + G L LINNAG + +E VM N
Sbjct: 52 TLKLDVTDE-DSVREVEQEVRKFTNGSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFY 110
Query: 459 SVYRLTMLAVPHLIQTKGCIVNLSCIAGTKPSTMALAYNISKAALDHFTKCVALELAPDG 638
V R+ LI+ KG IVN++ + P AYN SKAAL ++ + +ELAP G
Sbjct: 111 GVIRMNKAFQHQLIRAKGTIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTLRIELAPFG 170
Query: 639 IRVNSVNPGFVKTNL 683
++V S+ G V+T +
Sbjct: 171 VQVTSIMTGGVQTKI 185
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 69.7 bits (163), Expect = 5e-13
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Frame = +3
Query: 288 ITADVTDDGDTQRIINETIEHYGKLDVLINNAGVIGMGGIKNSTMETYDDVMSTNLRSVY 467
+ ADV+ + I + I+ G +DVLINNAG+ + + E++D +S LR Y
Sbjct: 50 LQADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNY 109
Query: 468 RLTMLAVPHLI-QTK-GCIVNLSCIAGTKPSTMALAYNISKAALDHFTKCVALELAPDGI 641
+PH+ Q K G IVN+ + G + AY+ +KA L++ TK +A+ P GI
Sbjct: 110 LTQRYVIPHMAKQGKGGSIVNIGSVNG-HIYLGSPAYSAAKAGLENLTKALAVRYGPLGI 168
Query: 642 RVNSVNPGFV 671
RVN PG +
Sbjct: 169 RVNVCAPGTI 178
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 69.7 bits (163), Expect = 5e-13
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Frame = +3
Query: 201 QLVLVGRKENNLRRIALYCEKSKGIKPFTITADVTDDGDTQRIINETIEHYGKLDVLINN 380
+L+L R+ + + IA E + + DV+D +I + + +DVLINN
Sbjct: 33 KLILAARRFSTVEEIAKELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVLINN 92
Query: 381 AGV-IGMGGIKNSTMETYDDVMSTNLRSVYRLTMLAVPHLI-QTKGCIVNLSCIAGTKPS 554
AG+ +G + + ++ +++TN+ + +T +P + KG I+N+ IAG +
Sbjct: 93 AGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESY 152
Query: 555 TMALAYNISKAALDHFTKCVALELAPDGIRVNSVNPGFVKT 677
Y +K+AL FT + E IR+ V+PG V+T
Sbjct: 153 VGGSVYCSTKSALAQFTSALRKETIDTRIRIMEVDPGLVET 193
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 68.1 bits (159), Expect = 2e-12
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Frame = +3
Query: 297 DVTDDGDTQRIINETIEHYGKLDVLINNAGVIGMGGIKNSTMETYDDVMSTNLRSVYRLT 476
DV + ++ + + I H+G++DVL+NNAG ++++T E ++ +TN+ +
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVI 81
Query: 477 MLAVP-HLIQTKGCIVNLSCIAGTKPSTMALAYNISKAALDHFTKCVALELAPDGIRVNS 653
P Q G I+N+S I G + Y +K A++ ++ + E+ G++V
Sbjct: 82 KAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWEMQSIGVKVKI 141
Query: 654 VNPGFVKT 677
+ PGF T
Sbjct: 142 IEPGFTAT 149
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 68.1 bits (159), Expect = 2e-12
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Frame = +3
Query: 297 DVTDDGDTQRIINETIEHYGKLDVLINNAGVIGMGGIKNSTMETYDDVMSTNLRSVYRLT 476
DV + ++ + + I H+G++DVL+NNAG ++++T E ++ +TN+ +
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVI 81
Query: 477 MLAVP-HLIQTKGCIVNLSCIAGTKPSTMALAYNISKAALDHFTKCVALELAPDGIRVNS 653
P Q G I+N+S I G + Y +K A++ ++ + E+ G++V
Sbjct: 82 KAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWEMQSIGVKVKI 141
Query: 654 VNPGFVKT 677
+ PGF T
Sbjct: 142 IEPGFTAT 149
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 62.5 bits (145), Expect = 8e-11
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Frame = +3
Query: 207 VLVGRKENNLRRIALYCEKSKGIKPFTITADVTDDGDTQRIINETIEHYG-KLDVLINNA 383
+L GR + L A +K G++ + + + N+ +E G +LDV+I NA
Sbjct: 38 LLYGRNKKALEYAAELRDKH-GVQAKAYSCPIENRSAVIETTNQAVEELGGRLDVMIANA 96
Query: 384 GV-IGMGGIKNSTMETYDDVMSTNLRSVYRLTMLAVPHLI-QTKGCIVNLSCIAG---TK 548
G+ I +++ + + V+ NL Y A H Q KG ++ + ++G
Sbjct: 97 GIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFTASMSGHIANW 156
Query: 549 PSTMALAYNISKAALDHFTKCVALELAPDGIRVNSVNPGFVKTNL 683
P A +Y+ +KAA+ H + +A+E AP RVNSV+PG++ T+L
Sbjct: 157 PQQWA-SYHATKAAVKHLARALAVEWAPFA-RVNSVSPGYIDTDL 199
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 60.1 bits (139), Expect = 4e-10
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Frame = +3
Query: 306 DDGDTQR-IINETIEHYGKLDVLINNAGVIGMG-GIKNSTMETYDDVMSTNLRSVYRLTM 479
D D R +++ ++ G +DVL+NN + I++ E +D TN+ S + +T
Sbjct: 103 DKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTK 162
Query: 480 LAVPHLIQTKGCIVNLSCIAGTKPSTMALAYNISKAALDHFTKCVALELAPDGIRVNSVN 659
A+ H+ ++ IVN S I L Y +K A+ FT+ ++ + A GIRVN+V
Sbjct: 163 AAISHM-KSGSSIVNCSSINAYVGRPDLLDYTSTKGAITAFTRGLSNQYAQHGIRVNAVA 221
Query: 660 PGFVKTNLLKGIGLSEDQLELFVKNVVGNMPLKKPVE 770
PG + T L+ ++++EL + +G M +PVE
Sbjct: 222 PGPIYTPLVSST-FPKEKIELSDQVPLGRM--GQPVE 255
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 59.3 bits (137), Expect = 7e-10
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Frame = +3
Query: 276 KPFTITADVTDDGDTQRIINETIEHYGKLDVLINNAGVIGMGGIKNSTMETYDDVMSTNL 455
K + DVTD + + +G +D++INNAG +G ++ +E M+ N
Sbjct: 48 KLLKLKLDVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNF 107
Query: 456 RSVYRLTMLAVPHLIQT--KGCIVNLSCIAGTKPSTMALAYNISKAALDHFTKCVALELA 629
V +T A+ + ++ G I+ +S +AG PS YN SK A++ ++ + EL
Sbjct: 108 WGVAYITKEALNLMRESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMRELD 167
Query: 630 PD-GIRVNSVNPGFVKT 677
P+ I + V PG ++T
Sbjct: 168 PNWNIAITIVQPGGMQT 184
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 59.3 bits (137), Expect = 7e-10
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Frame = +3
Query: 288 ITADVTDDGDTQRIINETIEHYGKLDVLINNAGVIG-MGGIKNSTMETYDDVMSTNLRSV 464
+ DVT+ G I I+ +GKLD +I NAGV+ + I ++ + + + N SV
Sbjct: 57 VKGDVTEVGKAS--IETAIKKFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSV 114
Query: 465 YRLTMLAVPHLIQTKGCIVNLSCIAGTKPSTMALAYNISKAALDHFTKCVALELAPDGIR 644
A+PHL +TKG IV +S A + AY SKAA++ + E PD +
Sbjct: 115 VETVKYAIPHLRKTKGTIVIVSSGAAVRVFPAWAAYCCSKAAINMLVMNLGSE-EPDIMS 173
Query: 645 VNSVNPGFVKT 677
V +V PG V T
Sbjct: 174 V-AVRPGVVDT 183
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 52.8 bits (121), Expect = 6e-08
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Frame = +3
Query: 261 KSKGIKPFTITADVTDDGDTQRIINETIEHYGKLDVLINNAGVIGMGGIKNSTMETYDDV 440
++ G+K +T DVT + + E + + +D+++ N G+ + T E + +
Sbjct: 66 QANGVKTYTCKCDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEEFANE 125
Query: 441 MSTNLRSVYRLTMLAVP-HLIQTKGCIVNLSCIAGTKPST--MALAYNISKAALDHFTKC 611
++ NL V+ + A P Q G +V + ++G + AYN SKA + K
Sbjct: 126 INVNLLGVFNVAHNAGPIFQKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQLIKS 185
Query: 612 VALELAPDGIRVNSVNPGFVKTNLLKG 692
+A+E RVN V+PG+ +++ G
Sbjct: 186 LAVEWRKFA-RVNCVSPGYTTSDMTGG 211
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 52.8 bits (121), Expect = 6e-08
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Frame = +3
Query: 270 GIKPFTITADVTDDGDTQRIINETIEHYGKLDVLINNAGVIGMGGIKNSTMETYDDVMST 449
G++ T+ D++ + + E + + ++ V++ NAG+ + +S ++ VM+
Sbjct: 69 GVQVHTLKIDISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHEFEKVMNI 128
Query: 450 NLRSVYRLTMLAVPHLIQTKG-----CIVNLSCIAGTKPSTMALAYNISKAALDHFTKCV 614
N SVYR+ + + + +G ++S P +A AY SKAA+ K +
Sbjct: 129 NTNSVYRVAYY-MGKIFKKQGFGNLIATASMSATIVNAPQHIA-AYCASKAAVRQLCKAL 186
Query: 615 ALELAPDGIRVNSVNPGFVKTNL 683
A+E A + R+NSV+PG+ T++
Sbjct: 187 AVEWA-EFARINSVSPGYFATDM 208
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +3
Query: 528 SCIAGTKPSTMALAYNISKAALDHFTKCVALELAPDGIRVNSVNPGFVKTNL 683
+C+ G +P+T + AY SKAAL++ K ++ EL DG V S++PG V T++
Sbjct: 146 ACMGGVRPNTYS-AYGQSKAALNYTMKEISFELEKDGFVVVSIHPGVVNTDM 196
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 44.4 bits (100), Expect = 2e-05
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Frame = +3
Query: 288 ITADVTDDGDTQRIINETIEHYGKLDVL-INNAGVIGMGGIKNSTMETYDDVMSTNLRSV 464
I DV+ E + +DVL +N+A G + N+ + ++ TN+
Sbjct: 59 IKLDVSSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGP 118
Query: 465 YRLTMLAVPHLIQTKG-CIVNLSCIAGTK----PSTMALAYNISKAALDHFTKCVALELA 629
+ P + + + IV S +AG+ PS+ + AY SKAAL++ K ++ EL
Sbjct: 119 IHVYQAFYPLIKKGRSKIIVFTSSLAGSMGAFFPSSQS-AYGQSKAALNYTMKEISFELQ 177
Query: 630 PDGIRVNSVNPGFVKTN 680
+G V S++PG V+T+
Sbjct: 178 DEGFIVISIHPGAVRTD 194
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 43.2 bits (97), Expect = 5e-05
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Frame = +3
Query: 288 ITADVTDDGDTQRIINETIEHYGKLDVLINNAGVIGMGGIKNSTMETYDDVMSTNLRSVY 467
I D++ E + GK+DVL N+G+ N+ + T DDV +++ Y
Sbjct: 59 IKLDISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSF---NTVLNTPDDVWNSH----Y 111
Query: 468 RLTMLAVPHLIQT------KG---CIVNLSCIAGTKPSTMAL---AYNISKAALDHFTKC 611
+ +L H+ Q KG IV S + G+ + Y SKAAL+ K
Sbjct: 112 KTNVLGPIHVYQAFYPLVKKGESKIIVFTSSLVGSMGAFFPFNQSGYGQSKAALNFTMKE 171
Query: 612 VALELAPDGIRVNSVNPGFVKTN 680
++ EL +G V S++PG V+T+
Sbjct: 172 ISFELQDEGFIVISIHPGMVRTD 194
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 36.7 bits (81), Expect = 0.004
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Frame = +3
Query: 285 TITADVTDDGDTQRIINETIEHYGKLDVLINNAGVI-GMGGIKNSTMETYDDVMSTNLRS 461
T+ DVT + +DVL N+G+ + + E ++ TN+
Sbjct: 58 TVELDVTSQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLG 117
Query: 462 VYRLTMLAVPHLIQTKGC-IVNLSCIAGTKPSTMAL---AYNISKAALDHFTKCVALELA 629
+ P L + K ++ S G+ A AY SKAA++ K +++ELA
Sbjct: 118 PIHVFKAFYPLLTKKKTRQVIFTSSECGSMGDFRATGFSAYGQSKAAINFTMKELSVELA 177
Query: 630 PDGIRVNSVNPGFVKTNL 683
+ S++PG VKT++
Sbjct: 178 DEHFTFISIHPGVVKTDM 195
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 35.5 bits (78), Expect = 0.010
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +3
Query: 186 SKLSAQLVLVGRKENNLRRIALYC-EKSKGIKPFTITADVTDDGDTQRIINETIEHYGKL 362
++ A++ L GR E +++ ++ + K + D+ D + I KL
Sbjct: 63 ARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLDLLDFESVYQAAESFIAKEEKL 122
Query: 363 DVLINNAGVIGMGGIKNSTMETYDDVMSTNLRSVYRLTMLAVPHLIQT 506
+L+NNAG+ M T + Y+ + TN S Y T L +P L +T
Sbjct: 123 HILVNNAGI--MNPPFELTKDGYELQIQTNYLSHYLFTELLLPTLRRT 168
>SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 840
Score = 29.9 bits (64), Expect = 0.51
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 159 YPNLHRLSKQLFRQIP*LTRKNACSFKVKQLSKAXRLPK 43
YPN R+S + R+I LTR+ + VK + + +P+
Sbjct: 599 YPNASRVSTMISRRIKDLTRRGIDNIYVKDIDRPWNVPR 637
>SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 892
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +3
Query: 432 DDVMSTNLRSVYRLTMLAVPHLIQTKGCIVNLSCIAGTKPSTMALAYNISKAALDH 599
DD S YR+T+ + +I+ I +C+ P+ + AY++ + ++ H
Sbjct: 684 DDAQGAGKNS-YRITVRQLESMIRLSEAIARANCVDDITPAFVNEAYSLLRQSIIH 738
>SPAC23C11.14 |zhf1|zhf, zhf|zinc ion transporter
Zhf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 412 FLMPP-IPITPALFIKTSSFP*CSMVSLIILWVSPSSV 302
FL P I I I S+ P C +LI+L V+P S+
Sbjct: 263 FLFDPCISILLTFIILFSAIPLCKSAALILLQVAPQSI 300
>SPBC776.06c |||spindle pole body interacting protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 555 YWALYQLYTTNSQYIL*FVLNAE 487
+W+ + LY TNS +I+ ++N +
Sbjct: 171 FWSFFNLYLTNSPHIMNDIINKD 193
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.8 bits (54), Expect = 8.4
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +3
Query: 192 LSAQLVLVGRKENNLRRIALYCE-KSKGIKPFT---ITADVTDD---GDTQRIINETIEH 350
LS +L + K ++ R ALY E S +K F + +T+ G +R+ ++
Sbjct: 599 LSYELFELLSKFDSSTRYALYGEWSSTSMKKFPELKLQNSITEKETKGILRRLTKTNVKQ 658
Query: 351 YGKLDVLINNAGVIGMGGIKNSTMETYDDVMSTNLRSVYRLTML 482
+G+L + ++ + I + +ETYD+++ + S +T L
Sbjct: 659 FGRLLAKVCHSNPCTVFSIALNQIETYDNLVEVVVDSARFITAL 702
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 8.4
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Frame = +3
Query: 315 DTQRIINETIEHYGKLDVLINNAGVIGM--GGIKNSTMETYDDVMSTNLRSVYRLTMLAV 488
+T ++ETI H + ++NN+G+ + G + + V N S++ L
Sbjct: 2830 NTLVFVDETITHILRFHRILNNSGMHALLQGSVGLGQKAVVEFVCWLNSFSLFELQKNQT 2889
Query: 489 PHLIQTKGCIVNLSCIAGTKPSTMALAYNISKAALDHF 602
+ + + ++ +AGT LA N S A + F
Sbjct: 2890 YSIEDFEDNLKSILILAGTTNCKACLAINESIAGVPGF 2927
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,868,382
Number of Sequences: 5004
Number of extensions: 57434
Number of successful extensions: 156
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -