Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_O04
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 266 1e-71
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 241 5e-64
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 225 5e-59
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 54 2e-07
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 53 3e-07
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 52 8e-07
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 50 3e-06
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 35 0.100
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 35 0.100
11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610 32 0.70
07_03_1414 - 26403361-26403969 32 0.70
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 1.2
07_03_1422 + 26462871-26463434,26463772-26463897 31 1.6
07_03_1413 - 26396426-26396890 31 1.6
02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,879... 29 3.8
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128... 28 8.7
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 266 bits (653), Expect = 1e-71
Identities = 127/234 (54%), Positives = 164/234 (70%)
Frame = +2
Query: 158 LFEXXPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 337
LFE PK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK
Sbjct: 24 LFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKN 83
Query: 338 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVEKK 517
A LFK+L KYRPE +P ++ G N VT L+E+
Sbjct: 84 LATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAK-KPIVVKYGLNHVTYLIEQS 142
Query: 518 KAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESG 697
KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+RLG++VH+KT + L LT V++
Sbjct: 143 KAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVKNE 202
Query: 698 DRASFSKVVEAIKTNFNERYEELRKHWGGGVXGNKSNARIAKLEKAKARELXQK 859
D+ FSK++EAIK NFN++++E+RK WGGGV G+KS A+ EK A+E Q+
Sbjct: 203 DKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQR 256
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 241 bits (590), Expect = 5e-64
Identities = 118/234 (50%), Positives = 161/234 (68%)
Frame = +2
Query: 158 LFEXXPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 337
LFE PK F IG + P +DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TLDK
Sbjct: 25 LFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLDKN 84
Query: 338 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVEKK 517
++L++ + E +P ++ G + VT L+E+
Sbjct: 85 LGCQKERLLKRAQAEAEGKTVEAK-----------------KPIVVKYGLDHVTYLIEQS 127
Query: 518 KAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESG 697
KAQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG++VH+KT + L LT V++
Sbjct: 128 KAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVKNE 187
Query: 698 DRASFSKVVEAIKTNFNERYEELRKHWGGGVXGNKSNARIAKLEKAKARELXQK 859
D+ FSK++EAIK+NFN++++E+RK WGGG+ G+KS A+ EK A+E Q+
Sbjct: 188 DKLEFSKILEAIKSNFNDKFDEVRKKWGGGIMGSKSQAKTKAREKLLAKEAAQR 241
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 225 bits (549), Expect = 5e-59
Identities = 115/234 (49%), Positives = 150/234 (64%)
Frame = +2
Query: 158 LFEXXPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 337
LFE PK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK
Sbjct: 8 LFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKN 67
Query: 338 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVEKK 517
A LFK+L KYRPE +P ++ G N VT L+E+
Sbjct: 68 LATNLFKMLLKYRPE-DKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQS 126
Query: 518 KAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESG 697
KAQLVVIAHDVDPIELV++LPALCRKM +VH+KT + L LT V++
Sbjct: 127 KAQLVVIAHDVDPIELVVWLPALCRKM--------------EIVHKKTASVLCLTTVKNE 172
Query: 698 DRASFSKVVEAIKTNFNERYEELRKHWGGGVXGNKSNARIAKLEKAKARELXQK 859
D+ FSK++EAIK NFN++++E+RK WGGGV G+KS A+ EK A+E Q+
Sbjct: 173 DKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQR 226
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +2
Query: 473 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GAL 646
++ G V K + + + L +IA ++ PI+++ +P LC + +PY V K L
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLATAGT 104
Query: 647 VHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGG 784
R TC L LT G+ V E +KT++++ E+ + G
Sbjct: 105 TKRPTCCVLVLTKPAKGELE--EDVKEKLKTDYDQVMSEVAEAGNG 148
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 53.2 bits (122), Expect = 3e-07
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +2
Query: 473 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 646
++ G N TK + + A+ VV+A D +P+E++L LP L VPY V K LG
Sbjct: 33 LKKGANEATKTLNRGIAEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 92
Query: 647 VHRKTCTCLALTNVESGDRASFSKVVEAIK 736
V R C +N S R + + AI+
Sbjct: 93 VTRPVIACSVTSNEASNLRDPINNLKVAIE 122
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 51.6 bits (118), Expect = 8e-07
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +2
Query: 473 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 646
++ G N TK + + ++ VV+A D +P+E++L LP L VPY V K LG
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94
Query: 647 VHRKTCTCLALTNVESGDRASFSKVVEAIK 736
V R C +N S + + +AI+
Sbjct: 95 VTRPVIACSVTSNEGSQLKTPIQNLKDAIE 124
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/98 (25%), Positives = 45/98 (45%)
Frame = +2
Query: 473 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVH 652
++ G V K + + L VIA ++ PI+++ +P LC + +PY V K L
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLATAGT 104
Query: 653 RKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEEL 766
K TC L + +V E +K++++ E+
Sbjct: 105 TKRPTCCVLVMTKPAKGEINEEVKEKLKSDYDHVVAEV 142
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 34.7 bits (76), Expect = 0.100
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 482 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 640
G K +EK AQL V+A D D + V + ALC + V V LG
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 34.7 bits (76), Expect = 0.100
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 482 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 640
G K +EK AQL V+A D D + V + ALC + V V LG
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93
>11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610
Length = 439
Score = 31.9 bits (69), Expect = 0.70
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = -1
Query: 840 ALAFSSLAMRALDLLPXTPPPQCLRSSS*RSLKFVLMASTTFEKEARSPDSTFVRAKHVH 661
ALAF L + A LL PP + S R ++ + + R P+ + A
Sbjct: 9 ALAFF-LLVAAASLLSLPPPSLAVTSPYVRPKPRATLSLLKDDDDGRKPEQVHISAVGSD 67
Query: 660 VLRCTSAPRRDLPLTMQYGT 601
+R T D P T++YGT
Sbjct: 68 KMRVTWITGGDAPATVEYGT 87
>07_03_1414 - 26403361-26403969
Length = 202
Score = 31.9 bits (69), Expect = 0.70
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -3
Query: 262 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHXLLGLNLFD 122
AL A + P + G++ + + +T G+ L P LEE + GL L+D
Sbjct: 76 ALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 250 PHPAPEGCTSASSESAPSDQP 312
P PAPE +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
>07_03_1422 + 26462871-26463434,26463772-26463897
Length = 229
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 262 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHXLLGLNLFD 122
AL + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 74 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120
>07_03_1413 - 26396426-26396890
Length = 154
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 262 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHXLLGLNLFD 122
AL + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 28 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74
>02_01_0014 -
87215-87280,87358-87495,87593-87721,87801-87869,
87962-88042,88133-88237,88338-88568,88665-90197,
90660-90752,91477-92887,93184-93305,93479-93718,
94521-94682,94770-94937,95025-95141,95266-95376,
95919-96506
Length = 1787
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = -1
Query: 876 YSAQPCFCXNSRALAFSSLA---MRALDLLPXTPPPQCLRSSS*RS-LKFVLMASTTFEK 709
Y A PCFC + + LA ++AL + P CLR+ + + L ++ ST ++
Sbjct: 175 YGAIPCFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQR 234
Query: 708 EARSPDSTFVR 676
A S + R
Sbjct: 235 VALSTAANICR 245
>02_04_0587 +
24110333-24110584,24111193-24111261,24112347-24112850,
24113094-24113336
Length = 355
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2
Query: 197 PDQWQSSLAXXRREDSRXXWAQPF*PPMGRR 105
P SSLA RR +R AQP PP RR
Sbjct: 24 PSSAASSLAFARRAAARPLRAQPLLPPAARR 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,335,030
Number of Sequences: 37544
Number of extensions: 411395
Number of successful extensions: 1333
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -