Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_O01
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0404 + 3138624-3140096                                           29   3.8  
04_04_0262 - 24024451-24025080,24025421-24026320                       29   5.1  
04_01_0505 + 6599181-6599249,6599537-6599632,6599931-6599962,660...    29   6.7  

>03_01_0404 + 3138624-3140096
          Length = 490

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -1

Query: 704 PLNRIYFCGALLMYFYSVPAALACSQSPSMIVHSSIAAQAQLPPHP 567
           P     FC +LL     +P+A A   +P++ V + +     LP HP
Sbjct: 6   PKQTFAFCHSLLSSRLLLPSAAAAPTAPALPVQALLTTAGLLPRHP 51


>04_04_0262 - 24024451-24025080,24025421-24026320
          Length = 509

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 6/155 (3%)
 Frame = -3

Query: 768 HRASNSLGVYHSMPYLIHLPLPPEPNLFLWSSADVFLQRTGSTGMFAVSVHDRALIDRGA 589
           HR+  +L   H+ P ++ L L   P L + S+AD       +  +F  +  DRAL  R A
Sbjct: 59  HRSLAALAARHAAPLML-LRLGSVPTLVV-STADA------ARALFRDN--DRALSGRPA 108

Query: 588 GAATTTSS----QLVRVGEGGFWMTMCVAFNSSLTGPPEIKPLSTQIIGLKCGKWSDVIT 421
             A T  S     +    +G +W     A  S L GPP ++       GL+  +  +   
Sbjct: 109 LYAATRLSYGQKSISFAPDGAYWRAARRACMSELLGPPRVR-------GLRDAREREAAA 161

Query: 420 L--KVVPAMSVPTGKRDWYSHNSVRIIGQPGVFDG 322
           L   V  A + P    D  +  S RI+ +    DG
Sbjct: 162 LVAAVAAAGASPVNLSDMVAATSSRIVRRVAFGDG 196


>04_01_0505 +
           6599181-6599249,6599537-6599632,6599931-6599962,
           6601191-6601428,6601852-6601905,6601923-6602130,
           6602353-6602590,6602788-6602962,6603074-6603442
          Length = 492

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 626 TANMPVLPVRCKNTSAELHKNKFGSGGRGRCIKYGI 733
           T N+ VL    +N SAE   NK G GG G   K G+
Sbjct: 116 TLNLTVLRAATRNFSAE---NKLGEGGFGEVFKLGM 148


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,684,813
Number of Sequences: 37544
Number of extensions: 506590
Number of successful extensions: 1392
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)