Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_N22
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0790 + 32019972-32020101,32020461-32020657,32020790-320209...    29   4.8  
11_08_0102 - 28354880-28355056,28355159-28355376,28355634-283557...    28   8.5  
08_02_1063 + 24024030-24024506,24024803-24024856,24024965-240251...    28   8.5  

>01_06_0790 +
           32019972-32020101,32020461-32020657,32020790-32020993,
           32021444-32021645,32021798-32021886,32022567-32022662,
           32022710-32022814,32023516-32023556,32023685-32023777,
           32023853-32023970,32024488-32024578,32024693-32024766,
           32025008-32025187,32025643-32025681
          Length = 552

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 310 PISQDNQTIITRPCKNISLSDTIAKSARACSLTVNCS*HC 191
           P S +  T I R C + +L   + K    CSL+ +C  HC
Sbjct: 330 PGSNNVHTAIARMCGSSALPSPLMKRLIGCSLSWHCLTHC 369


>11_08_0102 -
           28354880-28355056,28355159-28355376,28355634-28355712,
           28356451-28356519,28356602-28356681,28356818-28356925,
           28357103-28357169,28357894-28357959,28358042-28358119,
           28358198-28358250,28359542-28359575,28359851-28359865,
           28360082-28360109,28360628-28360716,28361688-28361810,
           28362192-28362296,28362381-28362485,28362924-28363139,
           28364656-28364845,28365193-28365418,28366096-28366162
          Length = 730

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/67 (25%), Positives = 29/67 (43%)
 Frame = +3

Query: 669 KRLQHLHQVSLKISLIHIIDLSENSIKQASLIDSLXRFIKKLGNR*NDFKTKRRSLRSEQ 848
           K +   H   + +SL+H I L++       L+D      K LG        K+  +  EQ
Sbjct: 482 KEIDATHHTKIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDLGCSNESIDLKKEGI--EQ 539

Query: 849 LILGXLL 869
           L++  +L
Sbjct: 540 LVVQLIL 546


>08_02_1063 +
           24024030-24024506,24024803-24024856,24024965-24025118,
           24025314-24025388,24025511-24025788,24026023-24026253,
           24026522-24026620,24026740-24026889,24027830-24027976,
           24028525-24028575,24028647-24028819,24029018-24029147,
           24029361-24029458,24029655-24029892,24030634-24030837,
           24031003-24031083,24031296-24031535
          Length = 959

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 663 APPSAVRSQFAASTSSSFRSMRLCVP 586
           APP   R+ FAAS++S+  + RL VP
Sbjct: 48  APPPPRRTPFAASSASASAARRLAVP 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,965,822
Number of Sequences: 37544
Number of extensions: 368716
Number of successful extensions: 932
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)