Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_N21
         (908 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    26   2.0  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    26   2.0  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    26   2.0  
AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens ...    26   2.2  
BC008207-1|AAH08207.1|  494|Homo sapiens hypothetical protein BC...    26   4.4  
AK123671-1|BAC85674.1|  520|Homo sapiens protein ( Homo sapiens ...    31   7.6  
AK027872-1|BAB55422.1|  509|Homo sapiens protein ( Homo sapiens ...    31   7.6  

>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 26.2 bits (55), Expect(2) = 2.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 822 PPPPXPPPP 848
           PPPP PPPP
Sbjct: 397 PPPPGPPPP 405



 Score = 25.0 bits (52), Expect(2) = 2.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 813 FXXPPPPXPPP 845
           F  PPPP PPP
Sbjct: 361 FAAPPPPPPPP 371


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 26.2 bits (55), Expect(2) = 2.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 822 PPPPXPPPP 848
           PPPP PPPP
Sbjct: 397 PPPPGPPPP 405



 Score = 25.0 bits (52), Expect(2) = 2.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 813 FXXPPPPXPPP 845
           F  PPPP PPP
Sbjct: 361 FAAPPPPPPPP 371


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 26.2 bits (55), Expect(2) = 2.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 822 PPPPXPPPP 848
           PPPP PPPP
Sbjct: 397 PPPPGPPPP 405



 Score = 25.0 bits (52), Expect(2) = 2.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 813 FXXPPPPXPPP 845
           F  PPPP PPP
Sbjct: 361 FAAPPPPPPPP 371


>AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
           WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
          Length = 169

 Score = 26.2 bits (55), Expect(2) = 2.2
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 822 PPPPXPPPP 848
           PPPP PPPP
Sbjct: 63  PPPPPPPPP 71



 Score = 25.0 bits (52), Expect(2) = 2.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 813 FXXPPPPXPPP 845
           F  PPPP PPP
Sbjct: 33  FAAPPPPPPPP 43


>BC008207-1|AAH08207.1|  494|Homo sapiens hypothetical protein
           BC008207 protein.
          Length = 494

 Score = 26.2 bits (55), Expect(2) = 4.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 822 PPPPXPPPP 848
           PPPP PPPP
Sbjct: 473 PPPPLPPPP 481



 Score = 23.8 bits (49), Expect(2) = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 813 FXXPPPPXPPP 845
           +  PPPP PPP
Sbjct: 466 YSLPPPPPPPP 476


>AK123671-1|BAC85674.1|  520|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41677 fis, clone HCASM2002918. ).
          Length = 520

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +2

Query: 278 GPXKKKIXXEGGGXG-KKLSPXXKKXXPRGEXPPPPPXXXXPPXP 409
           G  K+K+  E      +KL    K    R   PPPPP    PP P
Sbjct: 425 GSPKRKVLPEDSAQALEKLLQPFKSTSLRQAAPPPPPPPPPPPPP 469


>AK027872-1|BAB55422.1|  509|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14966 fis, clone THYRO1000034, weakly similar to
           TRICHOHYALIN. ).
          Length = 509

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +2

Query: 278 GPXKKKIXXEGGGXG-KKLSPXXKKXXPRGEXPPPPPXXXXPPXP 409
           G  K+K+  E      +KL    K    R   PPPPP    PP P
Sbjct: 236 GSPKRKVLPEDSAQALEKLLQPFKSTSLRQAAPPPPPPPPPPPPP 280


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,854,248
Number of Sequences: 237096
Number of extensions: 1954590
Number of successful extensions: 19962
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15380
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)