Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_N18
(799 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0299 - 17051570-17052474,17053542-17053755 35 0.065
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.26
12_02_1036 - 25587313-25587890,25589209-25589272,25589356-255894... 31 1.4
05_07_0031 - 27183252-27183317,27183542-27184282 31 1.4
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 31 1.4
07_03_1136 + 24218601-24218734,24218769-24219906 30 1.9
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 30 1.9
01_06_1612 - 38635703-38636215,38638725-38638967 27 4.1
12_02_1174 - 26696869-26698191 29 4.3
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 29 4.3
02_05_0686 - 30900748-30902167,30903442-30904742 29 4.3
02_05_0149 + 26290236-26290880 29 4.3
06_03_0292 + 19207029-19207940 26 6.8
12_01_0838 - 7830944-7831444 28 7.5
03_06_0599 + 34984869-34985319,34986581-34987563 25 8.5
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 28 9.9
09_02_0603 - 11150739-11150746,11150791-11151340 28 9.9
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 28 9.9
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 35.1 bits (77), Expect = 0.065
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 512 PPPPPPXXKXXXXXXXXXPXXXXXXXFFXXXPPPPPXP 625
PPPPPP P F+ PPPPP P
Sbjct: 290 PPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPP 327
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +3
Query: 513 PPPPPXXXXXXXXXXXXPPXXXXXFXFXGXXPPPPPXP 626
PPPPP P + PPPPP P
Sbjct: 291 PPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPP 328
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 491 PXXXXXXPPPPPPXXKXXXXXXXXXPXXXXXXXFFXXXPPPPPXP 625
P PPPPPP P F PPPPP P
Sbjct: 628 PNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPP 672
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 513 PPPPPXXXXXXXXXXXXPPXXXXXFXFXGXXPPPPPXP 626
PPPPP PP PPPPP P
Sbjct: 588 PPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPP 625
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 513 PPPPPXXXXXXXXXXXXPPXXXXXFXFXGXXPPPPPXP 626
PPPPP PP PPPPP P
Sbjct: 603 PPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPP 640
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 513 PPPPPXXXXXXXXXXXXPPXXXXXFXFXGXXPPPPPXP 626
PPPPP PP PPPPP P
Sbjct: 606 PPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPP 643
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 513 PPPPPXXXXXXXXXXXXPPXXXXXFXFXGXXPPPPPXP 626
PPPPP PP PPPPP P
Sbjct: 587 PPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPP 624
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 481 GGXAPXXXXXPPPPPPXXXXXXXXXXXXPXXXXXXXFFXXXXPPPPPP 624
G P PPPPPP P PP PPP
Sbjct: 705 GPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPP 752
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 472 KKXGGXAPXXXXXPPPPPPXXXXXXXXXXXXPXXXXXXXFFXXXXPPPPPP 624
+K +P PPPPPP P F PPPPPP
Sbjct: 532 RKLPSPSPTAAAPPPPPPPPP----------PPSGNKPAFSPPPPPPPPPP 572
>12_02_1036 -
25587313-25587890,25589209-25589272,25589356-25589448,
25589533-25589683,25590474-25590539,25590594-25590907
Length = 421
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 512 PPPPPPXXKXXXXXXXXXPXXXXXXXFFXXXPPPPPXP 625
PPPPPP P PPPPP P
Sbjct: 10 PPPPPPPQLEASGSDPDDPLLRDRVVVIAPPPPPPPPP 47
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +2
Query: 491 PXXXXXXPPPPPPXXKXXXXXXXXXPXXXXXXXFFXXXPPPPPXP 625
P PPPPPP P PPPPP P
Sbjct: 113 PQPSPPPPPPPPPPPPTTTTKPESLPAEADSEPELKAPPPPPPPP 157
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +1
Query: 493 PXXXXXPPPPPPXXXXXXXXXXXXPXXXXXXXFFXXXXPPPPPP 624
P PPPPPP PPPPPP
Sbjct: 115 PSPPPPPPPPPPPPTTTTKPESLPAEADSEPELKAPPPPPPPPP 158
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 511 PPPPPPXXXXXXXXXXXXPXXXXXXXFFXXXXPPPPP 621
PPPPPP P F PPPPP
Sbjct: 33 PPPPPPPLFPAMSARPQPPRPAHPARFVKPMPPPPPP 69
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 514 PPPPPXXXXXXXXXXXXPXXXXXXXFFXXXXPPPPPP 624
PPPPP P F PPPPPP
Sbjct: 33 PPPPPPPLFPAMSARPQPPRPAHPARFVKPMPPPPPP 69
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = -3
Query: 623 GGGGGGXXSXKXKXXXXXXGXXXXXXXXXXXXGGGGGGXXXXXG 492
GGGGGG + + K G GGGGGG G
Sbjct: 264 GGGGGGGGTDRNKGGGGGGGGALENAREDGAEGGGGGGGGGGGG 307
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 493 PXXXXXPPPPPPXXXXXXXXXXXXPXXXXXXXFFXXXXPPPPPP 624
P PPPPPP P PPPPPP
Sbjct: 305 PPIPPPPPPPPPPPMPRSRSASPSPSTSSSGSAGPPAPPPPPPP 348
>01_06_1612 - 38635703-38636215,38638725-38638967
Length = 251
Score = 26.6 bits (56), Expect(2) = 4.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 472 KKXGGXAPXXXXXPPPPPP 528
K+ GG A PPPPPP
Sbjct: 212 KEEGGEASAAPAEPPPPPP 230
Score = 21.0 bits (42), Expect(2) = 4.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 607 PPPPPP 624
PPPPPP
Sbjct: 226 PPPPPP 231
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 493 PXXXXXPPPPPPXXXXXXXXXXXXPXXXXXXXFFXXXXPPPPPP 624
P PPPPPP P PPPPPP
Sbjct: 117 PALSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPP 160
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 511 PPPPPPXXXXXXXXXXXXPXXXXXXXFFXXXXPPPPPP 624
PPPPPP P PPPPPP
Sbjct: 124 PPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPP 161
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 493 PXXXXXPPPPPPXXXXXXXXXXXXPXXXXXXXFFXXXXPPPPPP 624
P PPPPPP P PPPPPP
Sbjct: 153 PPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSL-QPPSPPPPPP 195
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +2
Query: 491 PXXXXXXPPPPPPXXKXXXXXXXXXPXXXXXXXFFXXXPPPPP 619
P PPPPPP P PPPPP
Sbjct: 183 PSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPP 225
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 491 PXXXXXXPPPPPPXXKXXXXXXXXXPXXXXXXXFFXXXPPPPPXP 625
P PPPPP + P FF PPPPP P
Sbjct: 46 PQAAVAAPPPPPQVIRVFAAAPPPPPAA-----FFAAVPPPPPPP 85
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 492 PXXXXXXPPPPPXXXXXXXXXXXXPPXXXXXFXFXGXXPPPPPXP 626
P PPPPP PP G PPPPP P
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP---KGPSPPPPPPP 370
>02_05_0149 + 26290236-26290880
Length = 214
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = -3
Query: 623 GGGGGGXXSXKXKXXXXXXGXXXXXXXXXXXXGGGGGGXXXXXGA 489
GGGGGG S + G GGGGGG G+
Sbjct: 105 GGGGGGGGSGRAYGFGGGYGGHPGGFGGGGGGGGGGGGRNYGGGS 149
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -3
Query: 623 GGGGGGXXSXKXKXXXXXXGXXXXXXXXXXXXGGGGGGXXXXXG 492
GGGGGG + G GGGGGG G
Sbjct: 103 GGGGGGGGGGSGRAYGFGGGYGGHPGGFGGGGGGGGGGGGRNYG 146
>06_03_0292 + 19207029-19207940
Length = 303
Score = 25.8 bits (54), Expect(2) = 6.8
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 475 KXGGXAPXXXXXPPPPPP 528
+ G AP PPPPPP
Sbjct: 45 RSGAGAPPTPPLPPPPPP 62
Score = 21.0 bits (42), Expect(2) = 6.8
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 607 PPPPPP 624
PPPPPP
Sbjct: 58 PPPPPP 63
>12_01_0838 - 7830944-7831444
Length = 166
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 623 GGGGGGXXSXKXKXXXXXXGXXXXXXXXXXXXGGGGGG 510
GGGGGG S G GGGGGG
Sbjct: 43 GGGGGGNGSGSGSGYGYNYGKGGGQSGGGQGSGGGGGG 80
>03_06_0599 + 34984869-34985319,34986581-34987563
Length = 477
Score = 25.4 bits (53), Expect(2) = 8.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 484 GXAPXXXXXPPPPPP 528
G AP PPPPPP
Sbjct: 395 GPAPPPPPQPPPPPP 409
Score = 21.0 bits (42), Expect(2) = 8.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 607 PPPPPP 624
PPPPPP
Sbjct: 407 PPPPPP 412
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +1
Query: 490 APXXXXXPPPPPPXXXXXXXXXXXXPXXXXXXXFFXXXXPPPPPP 624
+P PPPPPP PPPPPP
Sbjct: 81 SPPPPPPPPPPPPPPLSPTPTTTSWTTNSSSISASPILPPPPPPP 125
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 3/47 (6%)
Frame = +1
Query: 493 PXXXXXPPPPPPXXXXXXXXXXXXPXXXXXXXFFXXXXP---PPPPP 624
P PPPPPP P FF PPPPP
Sbjct: 38 PPPFGFPPPPPPGSTFVPLPQSGVPPPPPLGSFFVPPPQSRVPPPPP 84
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 492 PXXXXXXPPPPPXXXXXXXXXXXXPPXXXXXFXFXGXXPPPPPXP 626
P PPPPP PP G PPPPP P
Sbjct: 273 PPPPPQAPPPPPPNAPMGMPPRIPPPPVG------GTQPPPPPPP 311
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,602,140
Number of Sequences: 37544
Number of extensions: 431843
Number of successful extensions: 10875
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5736
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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