Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_N15
(886 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 83 4e-17
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 77 3e-15
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 68 2e-12
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 68 2e-12
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 55 1e-08
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 38 0.003
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 2.0
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 27 3.6
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 26 6.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 6.2
SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27 |Schizo... 26 8.2
SPAPB17E12.10c |||SAM-dependent methyltransferase|Schizosaccharo... 26 8.2
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 83.4 bits (197), Expect = 4e-17
Identities = 37/88 (42%), Positives = 48/88 (54%)
Frame = +2
Query: 536 EVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXX 715
E L + + P+GVCGQI+PWNYP+ M WKIAPALAAG +++K AE TPL+
Sbjct: 145 EKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLV 204
Query: 716 KEAXXXXXXXXXXXXXXATAGGALTHHP 799
+EA AG + HP
Sbjct: 205 EEAGFPKGVVNIISGLGTVAGSYMAKHP 232
Score = 33.5 bits (73), Expect = 0.041
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 4/157 (2%)
Frame = +1
Query: 424 GKP-VKQSEEEVYFSASVLRYYAGKADKILGNTIPS-ERRSPYVHHE--GTCRSVRSDNT 591
GKP V + +V + ++LRY AG ADKI G IP+ + Y G C + N
Sbjct: 107 GKPLVSNARGDVDGTIALLRYCAGWADKIYGQVIPTGPEKLAYAKRTPIGVCGQIVPWNY 166
Query: 592 VELPHTNDVLENSTSLSCRMYRCSEAS*TNTTNGARCCRPGQRSGFXXXXXXXXXXXXXX 771
+ + +C + + +E + + A + +GF
Sbjct: 167 PLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLV---EEAGFPKGVVNIISGLGTV 223
Query: 772 XXXXXYSPPRMLTKIAFTGSTEVGRIILGAASAVNLK 882
P + KIAFTGST+VG +I+ +A NLK
Sbjct: 224 AGSYMAKHPG-IDKIAFTGSTKVG-VIVQQLAASNLK 258
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 77.0 bits (181), Expect = 3e-15
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +2
Query: 548 FTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 691
+T EP+GVCGQIIPWN+P M +WKIAPA+A G T++LK AE TPL+
Sbjct: 155 YTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLS 202
Score = 69.7 bits (163), Expect = 5e-13
Identities = 35/100 (35%), Positives = 53/100 (53%)
Frame = +3
Query: 132 KVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRY 311
K ++ LFINN+ VD+V +P E +I +VA+ D+ D+D+AV A+ AF
Sbjct: 17 KTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTD 76
Query: 312 SPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLELWKT 431
+PWR ++QRG YLA +ETL+ K+
Sbjct: 77 APWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKS 116
Score = 46.0 bits (104), Expect = 7e-06
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 3/157 (1%)
Frame = +1
Query: 424 GKPVKQSEEEVYFSASVLRYYAGKADKILGNTIPSE-RRSPYVHHE--GTCRSVRSDNTV 594
GK + + +V +A RYY G ADK G TI ++ +R Y HE G C + N
Sbjct: 114 GKSITLARGDVQAAADCFRYYGGWADKDYGQTIETDIKRFAYTRHEPIGVCGQIIPWN-- 171
Query: 595 ELPHTNDVLENSTSLSCRMYRCSEAS*TNTTNGARCCRPGQRSGFXXXXXXXXXXXXXXX 774
P + + +++C + + + + GF
Sbjct: 172 -FPFLMCAWKIAPAVACGNTIILKTAELTPLSALCLTKFVPECGF-PPGVINVLSGDGRR 229
Query: 775 XXXXYSPPRMLTKIAFTGSTEVGRIILGAASAVNLKR 885
S + K+AFTGST VGR+++ AA++ NLK+
Sbjct: 230 CGNAISSHMDIDKVAFTGSTGVGRMVMRAAASSNLKK 266
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 68.1 bits (159), Expect = 2e-12
Identities = 34/97 (35%), Positives = 47/97 (48%)
Frame = +2
Query: 512 EIPFLQNGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 691
++P N F + P GV G I PWN+P+ M WK+ PA+A+G VVLKP+E P +
Sbjct: 145 KVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSELAPWS 204
Query: 692 XXXXXXXXKEAXXXXXXXXXXXXXXATAGGALTHHPE 802
KEA +G AL+ HP+
Sbjct: 205 CLEFALICKEAGLPDGVLNVIIGSGKESGAALSCHPK 241
Score = 39.9 bits (89), Expect = 5e-04
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +3
Query: 156 LFINNEWVDAV--SKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWRTM 329
LFI+ ++V + + K P INP E +I A D+D AV A F R W
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF-RSGIWAKW 81
Query: 330 DASQRGXXXXXXXXXXXSQSRYLAELETLELWK 428
QRG + LA ++T+ K
Sbjct: 82 PGKQRGLVLRKIAKMMREKRELLAGIDTINCGK 114
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 68.1 bits (159), Expect = 2e-12
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +2
Query: 551 TMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 691
T+K+PVGV G I PWN+P M++ K+ ALAAGCTVV++PA +TP T
Sbjct: 155 TIKQPVGVVGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFT 201
Score = 35.1 bits (77), Expect = 0.013
Identities = 30/118 (25%), Positives = 46/118 (38%)
Frame = +3
Query: 159 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWRTMDAS 338
+I +WV A S KTF NP + V + + A+ A +AF Y R D
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFLSY---RNSDIK 83
Query: 339 QRGXXXXXXXXXXXSQSRYLAELETLELWKTGKTIRRRSILFRKRAQILRWKSGQDIR 512
+R + LA + TLE GK + A+ + W +G+ +R
Sbjct: 84 ERYAILRRWYDLIMENADDLATMMTLE---NGKALGDAKGEVVYAAKFIDWFAGEALR 138
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 802 MLTKIAFTGSTEVGRIILGAASAVNLKR 885
++ K++FTGST VG+ IL S+ LK+
Sbjct: 239 LIRKVSFTGSTNVGK-ILAKQSSSTLKK 265
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 55.2 bits (127), Expect = 1e-08
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 551 TMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXKEAXX 730
++K+PVGV I PWN+P M++ K ALAAGCT + PA +TP +EA
Sbjct: 150 SIKQPVGVSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTPYVCLGLVRLAQEAGF 209
Query: 731 XXXXXXXXXXXXATA-GGALTHHP 799
A+A G LT +P
Sbjct: 210 PDGVLNVITSSDASAHGKELTTNP 233
Score = 42.3 bits (95), Expect = 9e-05
Identities = 28/127 (22%), Positives = 54/127 (42%)
Frame = +3
Query: 138 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSP 317
D + + F+ +W+ + + KTF NP +I +VA+ + A++AA +AF Y
Sbjct: 14 DKSHAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKTY-- 71
Query: 318 WRTMDASQRGXXXXXXXXXXXSQSRYLAELETLELWKTGKTIRRRSILFRKRAQILRWKS 497
+ QR L ++ TLE GK + + + + L+W +
Sbjct: 72 -KNFTHVQRSQLLERWAELIMENKDDLVKMLTLE---NGKPLSQAEMEVTTCSGYLKWYA 127
Query: 498 GQDIRKY 518
+ +R +
Sbjct: 128 AEAVRTF 134
Score = 33.9 bits (74), Expect = 0.031
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 424 GKPVKQSEEEVYFSASVLRYYAGKADKILGNTIPSERRS 540
GKP+ Q+E EV + L++YA +A + G+ PS +S
Sbjct: 106 GKPLSQAEMEVTTCSGYLKWYAAEAVRTFGDVAPSSLQS 144
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 802 MLTKIAFTGSTEVGRIILGAASAVNLKR 885
++ K++FTGST VG+I++G SA +K+
Sbjct: 234 IVRKVSFTGSTNVGKILMG-QSASTIKK 260
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 560 EPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQT 682
EP+GV ++ WNYP+ I AL AG +V+K +E T
Sbjct: 126 EPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELT 166
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 159 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKAD 266
F+ D S+ TF TI PQ+ + E K+D
Sbjct: 224 FLQQSEADQPSEDTFTTIGPQNSLTVNSTIEKHKSD 259
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 286 AATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINSLVYLTST 134
+ +A +SA S + TC +S+ G LTA ++++ NS ST
Sbjct: 442 SGSATLVSASSATGTCASYLSAAGSSATNAISLTADSNAVSRNSSASTMST 492
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 571 SVRSDNTVELPHTNDVLENSTSLSCRMYR--CSEAS*TN 681
SVR +NT +L D++E + R++R SEA+ N
Sbjct: 357 SVRDENTKKLKELQDIIEEQSKHMARLHREGFSEAAENN 395
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 296 SIPPLFPMAYHGRFSTR-PPIA*ASRTSRIPI*IP 397
S PP P A GR + PP+ ASRTS P+ P
Sbjct: 386 SNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
>SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 413
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 799 WVVSKSPARCRTVSRXDINNPRWKTRFF 716
W + KSP + T + D ++P W+ R F
Sbjct: 349 WHLCKSPFKRSTGNTNDNDDPSWRFRLF 376
>SPAPB17E12.10c |||SAM-dependent
methyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 460 FSASVLRYYAGKADKILGNTIPSERRSPYVHHEGTCRSVRSDNTVELP 603
FS+ +LR+Y+ K NT+ S R+S +E + ++ + P
Sbjct: 28 FSSCLLRFYSNPPKKTKKNTLISLRKSAETANEKFIEKINKEHQLFKP 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,431,841
Number of Sequences: 5004
Number of extensions: 72649
Number of successful extensions: 233
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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