Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_N13
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40802-8|ABQ13044.1| 212|Caenorhabditis elegans Hypothetical pr... 120 1e-27
U40802-7|AAV28321.1| 258|Caenorhabditis elegans Hypothetical pr... 120 1e-27
U40802-6|AAV28320.1| 330|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 31 1.5
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 31 1.5
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z50027-1|CAA90331.1| 583|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical... 29 4.5
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 29 4.5
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 29 4.5
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr... 29 5.9
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 29 5.9
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 29 5.9
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U40802-8|ABQ13044.1| 212|Caenorhabditis elegans Hypothetical
protein ZC477.3c protein.
Length = 212
Score = 120 bits (290), Expect = 1e-27
Identities = 61/158 (38%), Positives = 95/158 (60%)
Frame = +3
Query: 288 KVQALVTKXEKFTGVEXIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIEI*N*KKLHAE 467
K+ V E+F GV+ + Q V+ + K AQ RR+ ++ N++ K++H +
Sbjct: 31 KIDQYVDVYEEFIGVKTVRQAQEEVMRWEKKLSEAQLVRREKQSEINNLQS-RLKEIHFD 89
Query: 468 MQNTMKGDXKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVKLGHERERAH 647
+ T +G+ KYLQL TEEH++I +ER L F E ERE F +S V+ HERER
Sbjct: 90 LDRTSRGEDKYLQLLTEEHQIIKKERELLNSFEGLETAEREAFHQLSMRVRSSHERERER 149
Query: 648 AERNKYWYIVASIFGTVLGIAGSTINNHLKMAEFRDMM 761
AE+ K+W + AS+ G +LGIAG++I N L+M + ++M+
Sbjct: 150 AEKTKWWGVSASLIGALLGIAGTSIGNELRMRKLKEML 187
>U40802-7|AAV28321.1| 258|Caenorhabditis elegans Hypothetical
protein ZC477.3b protein.
Length = 258
Score = 120 bits (290), Expect = 1e-27
Identities = 61/158 (38%), Positives = 95/158 (60%)
Frame = +3
Query: 288 KVQALVTKXEKFTGVEXIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIEI*N*KKLHAE 467
K+ V E+F GV+ + Q V+ + K AQ RR+ ++ N++ K++H +
Sbjct: 31 KIDQYVDVYEEFIGVKTVRQAQEEVMRWEKKLSEAQLVRREKQSEINNLQS-RLKEIHFD 89
Query: 468 MQNTMKGDXKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVKLGHERERAH 647
+ T +G+ KYLQL TEEH++I +ER L F E ERE F +S V+ HERER
Sbjct: 90 LDRTSRGEDKYLQLLTEEHQIIKKERELLNSFEGLETAEREAFHQLSMRVRSSHERERER 149
Query: 648 AERNKYWYIVASIFGTVLGIAGSTINNHLKMAEFRDMM 761
AE+ K+W + AS+ G +LGIAG++I N L+M + ++M+
Sbjct: 150 AEKTKWWGVSASLIGALLGIAGTSIGNELRMRKLKEML 187
>U40802-6|AAV28320.1| 330|Caenorhabditis elegans Hypothetical
protein ZC477.3a protein.
Length = 330
Score = 120 bits (290), Expect = 1e-27
Identities = 61/158 (38%), Positives = 95/158 (60%)
Frame = +3
Query: 288 KVQALVTKXEKFTGVEXIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIEI*N*KKLHAE 467
K+ V E+F GV+ + Q V+ + K AQ RR+ ++ N++ K++H +
Sbjct: 31 KIDQYVDVYEEFIGVKTVRQAQEEVMRWEKKLSEAQLVRREKQSEINNLQS-RLKEIHFD 89
Query: 468 MQNTMKGDXKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVKLGHERERAH 647
+ T +G+ KYLQL TEEH++I +ER L F E ERE F +S V+ HERER
Sbjct: 90 LDRTSRGEDKYLQLLTEEHQIIKKERELLNSFEGLETAEREAFHQLSMRVRSSHERERER 149
Query: 648 AERNKYWYIVASIFGTVLGIAGSTINNHLKMAEFRDMM 761
AE+ K+W + AS+ G +LGIAG++I N L+M + ++M+
Sbjct: 150 AEKTKWWGVSASLIGALLGIAGTSIGNELRMRKLKEML 187
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 684 IFGTVLGIAGSTINNHLKMAEFRDMMEQ 767
I G++LG AG T++ L+M FR++M+Q
Sbjct: 767 ISGSLLGKAGETMSGRLRMDVFRNIMQQ 794
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 684 IFGTVLGIAGSTINNHLKMAEFRDMMEQ 767
I G++LG AG T++ L+M FR++M+Q
Sbjct: 767 ISGSLLGKAGETMSGRLRMDVFRNIMQQ 794
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 684 IFGTVLGIAGSTINNHLKMAEFRDMMEQ 767
I G++LG AG T++ L+M FR++M+Q
Sbjct: 753 ISGSLLGKAGETMSGRLRMDVFRNIMQQ 780
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Frame = +2
Query: 686 FWHGARYSRFDDKQSPEDGRVQGHDGAAD-----GQKRERXVHHRG----GRDRQPGRHH 838
F+ G+ +D++ PE GR Q H + D G E RG GRD Q R H
Sbjct: 296 FFRGSDAGGGEDRE-PEKGRKQEHKESRDRRPARGDSGEVEKRGRGEKAEGRDEQERRSH 354
Query: 839 GGDENR 856
G +E R
Sbjct: 355 GSEERR 360
>Z50027-1|CAA90331.1| 583|Caenorhabditis elegans Hypothetical
protein C39B10.1 protein.
Length = 583
Score = 29.1 bits (62), Expect = 4.5
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = -3
Query: 499 YFXSPFIVFCISACNFFQ-F*ISM---LAN*RPTSRRRSWAAMNLS--CASITVFCIAII 338
+F PF FC+S C +Q F I++ LA P +R A + C +IT FC I+
Sbjct: 122 FFLQPFASFCVS-CTIWQVFAITLERYLAVSSPLEQRTRKAKFGVGWICVAIT-FCAFIL 179
Query: 337 XSTPVNF 317
PV F
Sbjct: 180 NLLPVPF 186
>AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical
protein Y46G5A.23 protein.
Length = 108
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 740 GRVQGHDGAADGQKRERXVHHRGGRDRQPGRHHGGDENR 856
G+V G G G++ R H GG R G H GG R
Sbjct: 61 GQVLGGGGGGGGRRHHRGHRHGGGGHRHGG-HRGGGGGR 98
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +2
Query: 692 HGARYSRFDDKQSPEDGRVQGHDGAADGQKRERXVHHRGGRDRQPGRHHGGDENR 856
H R + + + Q E+G H+ +GQ G+ RQ + H G NR
Sbjct: 509 HNNRQNHYQNGQQRENGENGHHNHYQNGQSSNSWWSGNDGQTRQRKQQHNGYNNR 563
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +2
Query: 692 HGARYSRFDDKQSPEDGRVQGHDGAADGQKRERXVHHRGGRDRQPGRHHGGDENR 856
H R + + + Q E+G H+ +GQ G+ RQ + H G NR
Sbjct: 411 HNNRQNHYQNGQQRENGENGHHNHYQNGQSSNSWWSGNDGQTRQRKQQHNGYNNR 465
>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical protein
B0464.2 protein.
Length = 1150
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Frame = +2
Query: 695 GARYSRFDD-----KQSPEDGRVQGHDGAADGQKRER----XVHHRGGRDRQPGRHHGG- 844
G R R DD S + G G +G DG++RER + R ++ R GG
Sbjct: 940 GGRKRRNDDGDEFVNDSSDAGNYDGEEGGEDGERRERRKKDKAAKKASRKKRERRDSGGP 999
Query: 845 DENR 856
D NR
Sbjct: 1000 DSNR 1003
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 540 ERALRTLFADAEKEERELFATMSAAVKLGHERERAHAERNK 662
ERA R F + +K+E E+ A + A K E+ERA E +
Sbjct: 473 ERAQRE-FKNQKKQEEEIRAKLEAKKKAEQEKERAKREEQR 512
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 540 ERALRTLFADAEKEERELFATMSAAVKLGHERERAHAERNK 662
ERA R F + +K+E E+ A + A K E+ERA E +
Sbjct: 473 ERAQRE-FKNQKKQEEEIRAKLEAKKKAEQEKERAKREEQR 512
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 538 KNVPCGPSSPMPRRKNAS 591
++ PCGP SP+P K AS
Sbjct: 511 RSSPCGPESPIPLEKRAS 528
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,507,018
Number of Sequences: 27780
Number of extensions: 314250
Number of successful extensions: 1047
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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