Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_N12
         (1365 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1377 + 36764461-36765339                                         31   1.6  
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    29   8.5  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    29   8.5  
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037...    29   8.5  

>01_06_1377 + 36764461-36765339
          Length = 292

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -1

Query: 516 PPXKXXXPFXKGXYXFFPPXPPGGXXPPPP 427
           PP     P     Y F PP PP    PPPP
Sbjct: 157 PPEPQYPPPSSSPYYFPPPPPPAYSAPPPP 186



 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -1

Query: 531 KKKIXPPXKXXXPFXKGXYXFFPPXPPGGXXPPPP 427
           +++  PP +   P       +FPP PP     PPP
Sbjct: 151 RERSPPPPEPQYPPPSSSPYYFPPPPPPAYSAPPP 185


>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -1

Query: 465 PPXPPGGXXPPPPXXK 418
           PP PPG   PPPP  K
Sbjct: 617 PPRPPGAPPPPPPPGK 632


>11_01_0035 -
           256087-256185,256287-256430,256521-256632,256777-256958,
           257038-257169,257297-258589,259133-259837,260465-260549,
           260604-260650,260810-260900,261838-262101,262195-262309,
           262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -1

Query: 465 PPXPPGGXXPPPPXXK 418
           PP PPG   PPPP  K
Sbjct: 922 PPRPPGAPPPPPPPGK 937


>04_04_0233 +
           23801944-23802598,23802914-23803047,23803548-23803730,
           23804145-23804318
          Length = 381

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = -1

Query: 516 PPXKXXXPFXKGXYXFFPPXPPGGXXPPPP 427
           PP     PF        PP PP    PPPP
Sbjct: 10  PPTPSPPPFSSRPRVVGPPPPPPSDPPPPP 39


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,239,300
Number of Sequences: 37544
Number of extensions: 234087
Number of successful extensions: 1517
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4306671240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)