Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_N11
         (915 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066908-1|AAH66908.1|  157|Homo sapiens transmembrane protein 5...    38   0.067
BC007341-1|AAH07341.1|  157|Homo sapiens transmembrane protein 5...    38   0.067
AY358650-1|AAQ89013.1|  157|Homo sapiens SMP1 protein.                 38   0.067
AY071927-1|AAL61545.1|  157|Homo sapiens cervical cancer oncogen...    38   0.067
AL928711-7|CAH72608.1|  157|Homo sapiens transmembrane protein 5...    38   0.067
AF458851-1|AAL51108.1|  157|Homo sapiens small membrane protein ...    38   0.067
AF087880-1|AAP97180.1|  159|Homo sapiens IFNRC protein.                38   0.067
AF081282-1|AAD17754.1|  157|Homo sapiens small membrane protein ...    38   0.067
DQ286229-1|ABB91377.1|  126|Homo sapiens HCV p7-transregulated p...    37   0.089
BX537378-1|CAD97620.1|  158|Homo sapiens hypothetical protein pr...    37   0.089
BC000569-1|AAH00569.1|  158|Homo sapiens transmembrane protein 5...    37   0.089
AY820138-1|AAV68502.1|  158|Homo sapiens HCV p7-transregulated p...    37   0.089
AY358634-1|AAQ88997.1|  158|Homo sapiens C21ORF4 protein.              37   0.089
AF045606-1|AAC05974.2|  158|Homo sapiens C21orf4 protein.              37   0.089
AF039906-1|AAC05090.1|  124|Homo sapiens unknown protein.              37   0.089

>BC066908-1|AAH66908.1|  157|Homo sapiens transmembrane protein 50A
           protein.
          Length = 157

 Score = 37.5 bits (83), Expect = 0.067
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW IIDA  +YP
Sbjct: 29  GVLFFTGWWIIIDAAVIYP 47


>BC007341-1|AAH07341.1|  157|Homo sapiens transmembrane protein 50A
           protein.
          Length = 157

 Score = 37.5 bits (83), Expect = 0.067
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW IIDA  +YP
Sbjct: 29  GVLFFTGWWIIIDAAVIYP 47


>AY358650-1|AAQ89013.1|  157|Homo sapiens SMP1 protein.
          Length = 157

 Score = 37.5 bits (83), Expect = 0.067
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW IIDA  +YP
Sbjct: 29  GVLFFTGWWIIIDAAVIYP 47


>AY071927-1|AAL61545.1|  157|Homo sapiens cervical cancer oncogene 9
           protein.
          Length = 157

 Score = 37.5 bits (83), Expect = 0.067
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW IIDA  +YP
Sbjct: 29  GVLFFTGWWIIIDAAVIYP 47


>AL928711-7|CAH72608.1|  157|Homo sapiens transmembrane protein 50A
           protein.
          Length = 157

 Score = 37.5 bits (83), Expect = 0.067
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW IIDA  +YP
Sbjct: 29  GVLFFTGWWIIIDAAVIYP 47


>AF458851-1|AAL51108.1|  157|Homo sapiens small membrane protein 1
           protein.
          Length = 157

 Score = 37.5 bits (83), Expect = 0.067
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW IIDA  +YP
Sbjct: 29  GVLFFTGWWIIIDAAVIYP 47


>AF087880-1|AAP97180.1|  159|Homo sapiens IFNRC protein.
          Length = 159

 Score = 37.5 bits (83), Expect = 0.067
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW IIDA  +YP
Sbjct: 29  GVLFFTGWWIIIDAAVIYP 47


>AF081282-1|AAD17754.1|  157|Homo sapiens small membrane protein 1
           protein.
          Length = 157

 Score = 37.5 bits (83), Expect = 0.067
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW IIDA  +YP
Sbjct: 29  GVLFFTGWWIIIDAAVIYP 47


>DQ286229-1|ABB91377.1|  126|Homo sapiens HCV p7-transregulated
           protein 3 transcript variant 1 protein.
          Length = 126

 Score = 37.1 bits (82), Expect = 0.089
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW +IDA  VYP
Sbjct: 31  GILFFTGWWIMIDAAVVYP 49


>BX537378-1|CAD97620.1|  158|Homo sapiens hypothetical protein
           protein.
          Length = 158

 Score = 37.1 bits (82), Expect = 0.089
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW +IDA  VYP
Sbjct: 31  GILFFTGWWIMIDAAVVYP 49


>BC000569-1|AAH00569.1|  158|Homo sapiens transmembrane protein 50B
           protein.
          Length = 158

 Score = 37.1 bits (82), Expect = 0.089
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW +IDA  VYP
Sbjct: 31  GILFFTGWWIMIDAAVVYP 49


>AY820138-1|AAV68502.1|  158|Homo sapiens HCV p7-transregulated
           protein 3 protein.
          Length = 158

 Score = 37.1 bits (82), Expect = 0.089
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW +IDA  VYP
Sbjct: 31  GILFFTGWWIMIDAAVVYP 49


>AY358634-1|AAQ88997.1|  158|Homo sapiens C21ORF4 protein.
          Length = 158

 Score = 37.1 bits (82), Expect = 0.089
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW +IDA  VYP
Sbjct: 31  GILFFTGWWIMIDAAVVYP 49


>AF045606-1|AAC05974.2|  158|Homo sapiens C21orf4 protein.
          Length = 158

 Score = 37.1 bits (82), Expect = 0.089
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW +IDA  VYP
Sbjct: 31  GILFFTGWWIMIDAAVVYP 49


>AF039906-1|AAC05090.1|  124|Homo sapiens unknown protein.
          Length = 124

 Score = 37.1 bits (82), Expect = 0.089
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 GLLFFAGWWFIIDAXSVYP 325
           G+LFF GWW +IDA  VYP
Sbjct: 31  GILFFTGWWIMIDAAVVYP 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,932,194
Number of Sequences: 237096
Number of extensions: 1180656
Number of successful extensions: 4606
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4606
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)