Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_N10
         (883 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   0.12 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   1.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.3  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   3.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.0  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   4.0  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   4.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 606 PPPXXSXPGXXLGGGGXGPPPXXP 535
           PP      G  L GG  GPPP  P
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPP 535



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
 Frame = -1

Query: 553 APXXXPPXPXG--GGXFFGXXX-PPPPPPP 473
           AP   PP   G  G    G    PPPPPPP
Sbjct: 507 APNDGPPHGAGYDGRDLTGGPLGPPPPPPP 536



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +2

Query: 554 PXPPPPRXXPGXDXXGGGXGXP 619
           P PPPP   P     GG  G P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGP 606



 Score = 25.0 bits (52), Expect(2) = 0.12
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 490 PPPPPPXXXKXNXLXXGP 437
           PPPPPP     + L  GP
Sbjct: 585 PPPPPPMGPPPSPLAGGP 602



 Score = 25.0 bits (52), Expect = 3.1
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = -2

Query: 612 PXPPPXXSXPGXXLGGGGXGPPPXXPXXP 526
           P PPP    P    GG   GP    P  P
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 24.6 bits (51), Expect = 4.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 309 GXPPPPPXGG 280
           G PPPPP GG
Sbjct: 529 GPPPPPPPGG 538



 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 612 PXPPPXXSXPGXXLGGGGXGPP 547
           P PPP    P   L GG  G P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGP 606



 Score = 24.2 bits (50), Expect = 5.3
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 339 PPPPXFFFXXGXPPPPPXGGP 277
           PPPP      G PP P  GGP
Sbjct: 586 PPPPPM----GPPPSPLAGGP 602



 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 7/26 (26%)
 Frame = +3

Query: 519 PPXGXG-------GXXXGAPXPPPPG 575
           PP G G       G   G P PPPPG
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPG 537



 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
 Frame = +3

Query: 552 APXPPPP-GXXPXXTXGGGXG 611
           AP PPPP G  P    GG  G
Sbjct: 584 APPPPPPMGPPPSPLAGGPLG 604



 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -1

Query: 550 PXXXPPXPXGGGXFFGXXXPPPPPP 476
           P   PP P  GG   G     PP P
Sbjct: 590 PMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -2

Query: 354 FXXGGPPPPXFFFXXGXPPPPPXGGP 277
           F  G P  P        PPPPP G P
Sbjct: 569 FPAGFPNLPNAQPPPAPPPPPPMGPP 594



 Score = 23.0 bits (47), Expect(2) = 0.12
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = -1

Query: 556 GAPXXXPPXPXGGGXFFGXXXPPPPPP 476
           G P   PP P  GG          PPP
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPP 551


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 535 PXPXGGGXFFGXXXPPPPPPP 473
           P P       G   PPPPPPP
Sbjct: 769 PSPSRSAFADGIGSPPPPPPP 789



 Score = 25.0 bits (52), Expect = 3.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 505 GXXXPPPPPPP 473
           G   PPPPPPP
Sbjct: 781 GSPPPPPPPPP 791



 Score = 23.8 bits (49), Expect = 7.1
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
 Frame = +3

Query: 474 GGGGGGGXXXP--KKXPPPXG-XGGXXXGAPXPP 566
           GGGGG G      +  PP  G  GG   G+P  P
Sbjct: 126 GGGGGYGHQGSMMRAMPPELGMYGGGCYGSPPVP 159


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 5/48 (10%)
 Frame = +2

Query: 503 PKKXPPPXGXXGXXG-----GGPXPPPPRXXPGXDXXGGGXGXPPXRG 631
           P   P P G  G  G     G   P  P   PG D   G  G P  +G
Sbjct: 46  PPGAPGPVGPRGLTGHRGEKGNSGPVGPPGAPGRDGMPGAPGLPGSKG 93



 Score = 23.8 bits (49), Expect = 7.1
 Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
 Frame = +2

Query: 560 PPPPRXXPGXDXXGGGXGXPPXRGGXVLXXXXXXXXXKKXFXKXPPPG-PXXQXPXG 727
           PP P+  PG     G  G    RG   L         K       PPG P    P G
Sbjct: 105 PPGPKGNPGLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGPPGYPGDVGPKG 161


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
 Frame = +2

Query: 503 PKKXPPPXGXXGXXG--GGPXPPPPRXXPGXDXXGGGXGXPPXRG 631
           P+  P   G  G  G  G P P  PR  PG     G  G P   G
Sbjct: 457 PEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPG 501


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -1

Query: 571 GGGGXGAPXXXPPXPXGGGXFFGXXXPPPPPPP 473
           GG G G P   PP             PPPP PP
Sbjct: 737 GGSGAGGPSSSPPVMES--------IPPPPKPP 761


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 474 GGGGGGGXXXPKKXP 518
           GGGGGGG   P + P
Sbjct: 304 GGGGGGGSAGPVQQP 318



 Score = 24.6 bits (51), Expect = 4.0
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
 Frame = +3

Query: 474 GGGG----GGGXXXPKKXPPPXGXGGXXXGAPXPPPPGXXPXXTXGGG 605
           GGGG    GGG           G GG   G P     G     + GGG
Sbjct: 816 GGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGG 863


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 474 GGGGGGGXXXPKKXP 518
           GGGGGGG   P + P
Sbjct: 304 GGGGGGGSAGPVQQP 318


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 474 GGGGGGGXXXPKKXP 518
           GGGGGGG   P + P
Sbjct: 256 GGGGGGGSAGPVQQP 270


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +3

Query: 474 GGGGGGGXXXPKKXPPPXGXGG 539
           GGG  GG       P P G GG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGG 229



 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 583 GXXPGGGGXGAPXXXPPXPXGGG 515
           G  PGGGG  +    P    GGG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGG 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,290
Number of Sequences: 2352
Number of extensions: 12636
Number of successful extensions: 181
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)