Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_N05
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    28   7.9  
Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = -1

Query: 353 ESSFHQQQPSLDMAHYHQLMCP*QPVKCGTASPPLGCTVCWVPLLIPKTC 204
           +  F Q QP    + Y Q  C  QP      +PP  C +  +P   P  C
Sbjct: 617 QQPFQQYQPQYPQS-YQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPC 665


>Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical
           protein K08E7.5d protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = -1

Query: 353 ESSFHQQQPSLDMAHYHQLMCP*QPVKCGTASPPLGCTVCWVPLLIPKTC 204
           +  F Q QP    + Y Q  C  QP      +PP  C +  +P   P  C
Sbjct: 262 QQPFQQYQPQYPQS-YQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPC 310


>Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E7.5b protein.
          Length = 493

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = -1

Query: 353 ESSFHQQQPSLDMAHYHQLMCP*QPVKCGTASPPLGCTVCWVPLLIPKTC 204
           +  F Q QP    + Y Q  C  QP      +PP  C +  +P   P  C
Sbjct: 214 QQPFQQYQPQYPQS-YQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPC 262


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
            K08E7.5a protein.
          Length = 1221

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = -1

Query: 353  ESSFHQQQPSLDMAHYHQLMCP*QPVKCGTASPPLGCTVCWVPLLIPKTC 204
            +  F Q QP    + Y Q  C  QP      +PP  C +  +P   P  C
Sbjct: 942  QQPFQQYQPQYPQS-YQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPC 990


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,715,226
Number of Sequences: 27780
Number of extensions: 266330
Number of successful extensions: 540
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)