Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_N01
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024757-5|AAK68430.1|  814|Caenorhabditis elegans Hypothetical ...    35   0.070
L08403-1|AAA28025.1|  810|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AL110498-7|CAB57909.2|  302|Caenorhabditis elegans Hypothetical ...    30   2.6  
AC006603-2|AAF39746.2|  507|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p...    29   6.0  
U80443-5|AAD32269.1|  635|Caenorhabditis elegans Ferm domain (pr...    29   6.0  
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    29   6.0  
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    29   6.0  
AF016428-1|AAO26001.1|  330|Caenorhabditis elegans Serpentine re...    29   6.0  
AF040657-1|AAB95054.1|  758|Caenorhabditis elegans Hypothetical ...    28   8.0  
AC024849-4|AAL27260.2|  152|Caenorhabditis elegans Hypothetical ...    28   8.0  

>AC024757-5|AAK68430.1|  814|Caenorhabditis elegans Hypothetical
           protein Y37E11AL.8 protein.
          Length = 814

 Score = 35.1 bits (77), Expect = 0.070
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 656 VSVRAHWLSVDGVQPTVPENPPP 724
           + ++ HWL VDG+QP +PEN  P
Sbjct: 207 IMIKDHWLVVDGIQPCLPENVIP 229


>L08403-1|AAA28025.1|  810|Caenorhabditis elegans Hypothetical
           protein F42H10.5 protein.
          Length = 810

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = -1

Query: 809 VYLQNLYCLVYSVYLLDQQIQVSELLLKAVVDFQVLLVEPH----PHLANVHEQIHPMEP 642
           V  +N+Y ++ S   +   IQ++  +LKA   F+V L EP      HL   H  I+ M  
Sbjct: 465 VLKKNVYAMLVSYLTVPAAIQLASQMLKA--KFEVPLTEPFHVIVEHLV-AHRDIYQMNM 521

Query: 641 LGVVLI 624
            G+ LI
Sbjct: 522 EGITLI 527


>AL110498-7|CAB57909.2|  302|Caenorhabditis elegans Hypothetical
           protein Y64G10A.1 protein.
          Length = 302

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 294 GSFVNVGFHXSASSACWYRHSWA 362
           G+F  +GFH + +S  WY +SWA
Sbjct: 251 GAFYRLGFHCNLTSGAWY-NSWA 272


>AC006603-2|AAF39746.2|  507|Caenorhabditis elegans Hypothetical
           protein B0524.3 protein.
          Length = 507

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +2

Query: 671 HWLSVDGVQPTVPENPPPLSKEAQKLESVDPISKLSK--PSNKDSAGKP 811
           H  SVD +Q   P  P   SK   KLE ++    LS+  P+ + S+ +P
Sbjct: 126 HLQSVDNIQHLYPTGPSDWSKVKSKLEQLEYTRNLSRVLPALQVSSARP 174


>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +2

Query: 605 RSLGRILSAPPPKVPLDVSVRAHWLSVDG--VQPTVPENPPPLSKEAQ-KLESVDPISKL 775
           + L  +++  P   P+         S  G  + P +P  P   ++E+  K  S+D   +L
Sbjct: 320 QQLQHVINITPIPTPISTGQIVTHASPAGTVIVPVLPLQPGTSNQESSSKTVSIDSDEEL 379

Query: 776 SKPSNKDSAGKP 811
            + SN+D +G+P
Sbjct: 380 PESSNQDQSGEP 391


>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +2

Query: 605 RSLGRILSAPPPKVPLDVSVRAHWLSVDG--VQPTVPENPPPLSKEAQ-KLESVDPISKL 775
           + L  +++  P   P+         S  G  + P +P  P   ++E+  K  S+D   +L
Sbjct: 320 QQLQHVINITPIPTPISTGQIVTHASPAGTVIVPVLPLQPGTSNQESSSKTVSIDSDEEL 379

Query: 776 SKPSNKDSAGKP 811
            + SN+D +G+P
Sbjct: 380 PESSNQDQSGEP 391


>U80443-5|AAD32269.1|  635|Caenorhabditis elegans Ferm domain
           (protein4.1-ezrin-radixin-moesin) family protein 4,
           isoform a protein.
          Length = 635

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 576 ELHFIEEKEIDLSGEFYQHHPQRFHWMYLFVHIG*VWMGFNQQYLKIHHRFQ 731
           +L  I+EK  D  G  YQ H +  +W+ L   I  V   F  + + +H RF+
Sbjct: 60  QLKHIQEK--DFLGLRYQDHHKHRYWLDLTRSINHVVKNFKTESMTLHLRFR 109


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +2

Query: 644 VPLDVSVRAHWLSVDGVQPTVPENPPPLSKEAQKLESVDPISKLSKPSNKDSAGKP 811
           VP+++ V         ++PT P +P         L  V+PI  + +P+   S+  P
Sbjct: 130 VPVNIEVAVLEEKSIQIEPTSPAHPEDPQPSTSSLPLVEPIEDIVEPNEPTSSADP 185


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +2

Query: 644 VPLDVSVRAHWLSVDGVQPTVPENPPPLSKEAQKLESVDPISKLSKPSNKDSAGKP 811
           VP+++ V         ++PT P +P         L  V+PI  + +P+   S+  P
Sbjct: 144 VPVNIEVAVLEEKSIQIEPTSPAHPEDPQPSTSSLPLVEPIEDIVEPNEPTSSADP 199


>AF016428-1|AAO26001.1|  330|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 66 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = -2

Query: 883 LNSWVAA-VXMHKF*CFQSCCFATYRFTCRI---FIAWFTQFTYWINRFKFLS 737
           LN+W+A  + MH      SC F   +F   +   F+AW   FT+W    +FLS
Sbjct: 69  LNTWIAVRMEMHP-----SCIFFL-KFVEELIPGFLAWTKYFTWWFLHIQFLS 115


>AF040657-1|AAB95054.1|  758|Caenorhabditis elegans Hypothetical
           protein T20H9.6 protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -1

Query: 518 LTLIVFYLQGMILYL*WKVFVSLSDA*TFMAXLNNHFSSDM 396
           L++IVF +  +IL++ WKV+ + SD         +H S D+
Sbjct: 699 LSMIVFIIVCVILFVAWKVYDASSDDKKIEEKSKSHSSKDI 739


>AC024849-4|AAL27260.2|  152|Caenorhabditis elegans Hypothetical
           protein Y67D8B.5 protein.
          Length = 152

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = +2

Query: 656 VSVRAHWLSVDGVQPTVPEN---PPPLSKEAQKLESVDPISKLSKPSNKDSAGKP 811
           +S +A     DG +P  P     P P  +   +    DP S+LSK S++ SA KP
Sbjct: 44  ISKQAKMEKKDGPEPPPPPPLNVPEPAPQVPSQAAGPDP-SRLSKRSSRQSANKP 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,835,061
Number of Sequences: 27780
Number of extensions: 305216
Number of successful extensions: 1156
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)