Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_M23
(932 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 28 0.35
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 28 0.47
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 27 1.1
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 27 1.1
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 3.3
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 28.3 bits (60), Expect = 0.35
Identities = 30/111 (27%), Positives = 33/111 (29%), Gaps = 1/111 (0%)
Frame = -3
Query: 813 GXPGXNPRGXXNSXSGXAHPXXXGGDXF*XLXGGGGPMGKXXQXGPFXGXGPLGXPXXKX 634
G PG R G GD + G GP G GP G +G
Sbjct: 72 GPPGAPGRDGMPGAPGLPGSKGVKGDPGLSMVGPPGPKGNPGLRGPKGERGGMGDRGD-- 129
Query: 633 FFPGXPPILGETXXPPXGGGXXXP-PPXXPGXXXXXXGXXXGXPKXNPXXP 484
PG P LG P G P PP PG P +P P
Sbjct: 130 --PGLPGSLG---YPGEKGDLGTPGPPGYPGDVGPKGEPGPKGPAGHPGAP 175
Score = 26.2 bits (55), Expect = 1.4
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 898 PPPPXGKXGXXGFPGXXXGXGTKGGXXGGXXRGXPPG 788
PP G+ G G PG G KG G PPG
Sbjct: 73 PPGAPGRDGMPGAPGLPGSKGVKGDP--GLSMVGPPG 107
Score = 24.2 bits (50), Expect = 5.7
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -1
Query: 599 PXXPPXGGXXPPPPPKXRGPXXXXGGXGXGPQXXTPXPXGGXG 471
P PP PP PP GP G G P G G
Sbjct: 708 PQLPPQR-KGPPGPPGFNGPKGDKGLPGLAGPAGIPGAPGAPG 749
Score = 23.8 bits (49), Expect = 7.6
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -1
Query: 605 GKPXXPPXGGXXPPPPPKXRGPXXXXGGXGXGPQXXTPXPXGGXG 471
G P G P P RGP GG G P G G
Sbjct: 96 GDPGLSMVGPPGPKGNPGLRGPKGERGGMGDRGDPGLPGSLGYPG 140
Score = 23.8 bits (49), Expect = 7.6
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -2
Query: 898 PPPPXGKXGXXGFPGXXXGXGTKG 827
PP P G G G G G G +G
Sbjct: 105 PPGPKGNPGLRGPKGERGGMGDRG 128
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 27.9 bits (59), Expect = 0.47
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -2
Query: 889 PXGKXGXXGFPGXXXGXGTKGGXXGGXXRGXPPG 788
P G+ G G PG G G GG R PG
Sbjct: 381 PKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPG 414
Score = 25.0 bits (52), Expect = 3.3
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +2
Query: 563 GXXXPPPXGGXXVSPKIGGXPGKXXXXXGXPKGPXPXXGPXWXXFPIGP 709
G P G P I G G G P P P GP P GP
Sbjct: 380 GPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGP-KGPRGYEGPQGP 427
Score = 24.6 bits (51), Expect = 4.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 895 PPPXGKXGXXGFPGXXXGXGTKG 827
P P G+ G GFPG G G
Sbjct: 240 PGPQGEVGPRGFPGRPGEKGVPG 262
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 26.6 bits (56), Expect = 1.1
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 768 PXGNYXXPGGXPLXXPPXXPPFVPXPXXXPGXP 866
P G P P PP PP P P G P
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGP 602
Score = 25.8 bits (54), Expect = 1.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 569 PPPPPKXRGPXXXXGGXGXGPQXXTP 492
PPPPP P GG GP P
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRP 611
Score = 23.8 bits (49), Expect = 7.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 924 GGPXGKXPXPPP 889
GGP G P PPP
Sbjct: 525 GGPLGPPPPPPP 536
Score = 23.8 bits (49), Expect = 7.6
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -1
Query: 599 PXXPPXGGXXPPPPPKXRGPXXXXGG 522
P PP PPP P GP G
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAG 608
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -2
Query: 448 PPPPPXREXKXKPXGGGKXXXP 383
PPPPP P GG P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGP 606
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 26.6 bits (56), Expect = 1.1
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 768 PXGNYXXPGGXPLXXPPXXPPFVPXPXXXPGXPXXPXXPXG 890
P G Y P G P+ P PP P PG P G
Sbjct: 214 PGGMYPQPPGVPMPMRPQMPPGA-VPGMQPGMQPRPPSAQG 253
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 25.0 bits (52), Expect = 3.3
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 883 GKXGXXGFPGXXXGXGTKGGXXGGXXRGXPPG 788
G G G G G+ GG GG G P G
Sbjct: 672 GGGAVGGGSGAGGGAGSSGGSGGGLASGSPYG 703
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,481
Number of Sequences: 2352
Number of extensions: 16108
Number of successful extensions: 77
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101708946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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