Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_M22
(862 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127; Eukar... 171 2e-41
UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20; Eukary... 167 2e-40
UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34; Euka... 146 5e-34
UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15; Eukary... 135 1e-30
UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6; Eukaryo... 122 9e-27
UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal ... 116 1e-24
UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillar... 103 4e-21
UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=... 102 1e-20
UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia ... 87 4e-16
UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3; Pyroco... 84 5e-15
UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4; Euryar... 83 9e-15
UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137, w... 83 1e-14
UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6; Archae... 83 1e-14
UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropy... 79 1e-13
UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 76 1e-12
UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4; Thermo... 74 5e-12
UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8; Archae... 73 7e-12
UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 73 9e-12
UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4; Sulfol... 71 3e-11
UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 69 2e-10
UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1; Encepha... 68 3e-10
UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1; uncult... 65 2e-09
UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1; Archae... 64 3e-09
UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4; Methan... 62 2e-08
UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 59 1e-07
UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 56 9e-07
UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured... 56 1e-06
UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:... 54 4e-06
UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole gen... 54 6e-06
UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiell... 49 1e-04
UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44; Archa... 44 0.004
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 42 0.015
UniRef50_A5KLN0 Cluster: Putative uncharacterized protein; n=2; ... 41 0.046
UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 40 0.081
UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 40 0.11
UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n... 38 0.25
UniRef50_A5ZAJ2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.43
UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 37 0.57
UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43; Lac... 36 1.3
UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein; ... 36 1.7
UniRef50_Q6KZI7 Cluster: 50S ribosomal protein L7Ae; n=4; Thermo... 35 3.0
UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2; Lact... 34 4.0
UniRef50_Q81Y70 Cluster: Acetyl-CoA acetyltransferase; n=11; Bac... 34 4.0
UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 34 4.0
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 34 4.0
UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum ae... 34 5.3
UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 33 7.0
UniRef50_A5E3R8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_A2BJ73 Cluster: Ferrous iron transport protein; n=1; Hy... 33 7.0
UniRef50_A0RUR4 Cluster: Ribosomal protein L30E; n=1; Cenarchaeu... 33 7.0
UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7; Archae... 33 7.0
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.3
>UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127;
Eukaryota|Rep: 60S ribosomal protein L30 - Homo sapiens
(Human)
Length = 115
Score = 171 bits (416), Expect = 2e-41
Identities = 79/106 (74%), Positives = 87/106 (82%)
Frame = +1
Query: 178 RNRKRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 357
+ K+ + L MKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEIEYYA
Sbjct: 5 KKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYA 64
Query: 358 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 495
+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 65 MLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
Score = 38.7 bits (86), Expect = 0.19
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 165 MVAAKKQKKTIESINSRLALXDEIGKILLRIQANFENSSTRQSKA 299
MVAAKK KK++ESINSRL L + GK +L + + RQ KA
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLK--MIRQGKA 43
>UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20;
Eukaryota|Rep: 60S ribosomal protein L30 - Branchiostoma
belcheri (Amphioxus)
Length = 114
Score = 167 bits (407), Expect = 2e-40
Identities = 76/105 (72%), Positives = 87/105 (82%)
Frame = +1
Query: 178 RNRKRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 357
+ +++ + L MKSGKY LG K+TLK LRQGKAKL+IIA N P LRKSEIEYYA
Sbjct: 2 KQKRKTMESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTPALRKSEIEYYA 61
Query: 358 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 492
+LAKTGVHHYSGNNIELGTACGKY+RVCTLAITDPGDSDII ++P
Sbjct: 62 MLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDPGDSDIIRSMP 106
>UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34;
Eukaryota|Rep: 60S ribosomal protein L30-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 112
Score = 146 bits (355), Expect = 5e-34
Identities = 64/106 (60%), Positives = 81/106 (76%)
Frame = +1
Query: 175 QRNRKRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYY 354
++ K+ + L MKSGKY LGYK LK+LR K KL++I+ N PPLR+SEIEYY
Sbjct: 4 EKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYY 63
Query: 355 ALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 492
A+LAK GVHHY+GNN++LGTACGKY+RV L+I DPGDSDII ++P
Sbjct: 64 AMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIP 109
>UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15;
Eukaryota|Rep: 60S ribosomal protein L30 - Trypanosoma
brucei brucei
Length = 105
Score = 135 bits (327), Expect = 1e-30
Identities = 57/83 (68%), Positives = 73/83 (87%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
MKSGKY LG +Q+LKTLRQG++KLV+I+ N PP+RK+EIEYY L+KT +HHYSGNN++L
Sbjct: 20 MKSGKYVLGTQQSLKTLRQGRSKLVVISANCPPIRKAEIEYYCTLSKTPIHHYSGNNLDL 79
Query: 409 GTACGKYYRVCTLAITDPGDSDI 477
GTACG+++R C L+ITD GDSDI
Sbjct: 80 GTACGRHFRACVLSITDVGDSDI 102
>UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6;
Eukaryota|Rep: 60S ribosomal protein L30 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 105
Score = 122 bits (295), Expect = 9e-27
Identities = 57/100 (57%), Positives = 75/100 (75%)
Frame = +1
Query: 190 RPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAK 369
+ + L +KSGKY LGYK T+K+LRQGK+KL+IIA N P LRKSE+EYYA+L+K
Sbjct: 5 KSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSK 64
Query: 370 TGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 489
T V+++ G N ELGTA GK +RV ++I + GDSDI+TTL
Sbjct: 65 TKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTL 104
>UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal
protein L30; n=1; Gallus gallus|Rep: PREDICTED: similar
to ribosomal protein L30 - Gallus gallus
Length = 131
Score = 116 bits (278), Expect = 1e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1
Query: 328 LRKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 495
LRKSEIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 71 LRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 126
>UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillardia
theta|Rep: 60S ribosomal protein L30 - Guillardia theta
(Cryptomonas phi)
Length = 107
Score = 103 bits (248), Expect = 4e-21
Identities = 48/94 (51%), Positives = 62/94 (65%)
Frame = +1
Query: 187 KRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 366
K S L+ L +K+GK+ GYK TLK LR GK K++II N PLRK E+EYYA+L
Sbjct: 7 KSTSELLSSKLKIIIKTGKFSYGYKATLKNLRSGKCKMIIITDNCIPLRKLELEYYAMLN 66
Query: 367 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGD 468
K VHH+ GNN++LG +CGK Y L IT+ G+
Sbjct: 67 KCHVHHFYGNNVDLGLSCGKSYGCSCLGITESGE 100
>UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=5;
Eukaryota|Rep: 60S ribosomal protein L30, putative -
Trichomonas vaginalis G3
Length = 112
Score = 102 bits (245), Expect = 1e-20
Identities = 47/107 (43%), Positives = 69/107 (64%)
Frame = +1
Query: 175 QRNRKRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYY 354
++ R + +L KSGKY LG QTLK+LR G+AKLVI A N P +S IEYY
Sbjct: 3 RKKLSRARESIINSLSLVTKSGKYSLGISQTLKSLRNGEAKLVIFASNVAPAHRSLIEYY 62
Query: 355 ALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 495
A+L+ + + G+N++LGTACGKY+R ++I D G+S+I+ + +
Sbjct: 63 AMLSGCDILPFDGDNVDLGTACGKYFRSSVISIIDAGESEILKMIKQ 109
>UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_24_9208_8879 - Giardia lamblia ATCC
50803
Length = 109
Score = 87.4 bits (207), Expect = 4e-16
Identities = 40/101 (39%), Positives = 64/101 (63%)
Frame = +1
Query: 187 KRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 366
K+ ++ L +KSGKY LG Q ++ +R GKA+LV +A N PPL KS+++Y L+
Sbjct: 8 KKAQDSISLTLTLVVKSGKYTLGTDQAIRNIRDGKAQLVFMANNCPPLVKSQVDYLCHLS 67
Query: 367 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 489
KT V ++G++ ELG A G+ + V + I + GD+D+ + L
Sbjct: 68 KTPVRVFAGSSRELGIAVGRQFNVSIMTILEAGDADLTSIL 108
>UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3;
Pyrococcus|Rep: 50S ribosomal protein L30e - Pyrococcus
furiosus
Length = 99
Score = 83.8 bits (198), Expect = 5e-15
Identities = 39/84 (46%), Positives = 57/84 (67%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
M++GK LG +T++ + G AKL+I+AKNAP K +I YYA L+ V+ + G ++EL
Sbjct: 11 METGKVVLGSNETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVEL 70
Query: 409 GTACGKYYRVCTLAITDPGDSDII 480
GT GK + V +LAI DPG+S I+
Sbjct: 71 GTLLGKPFVVASLAIVDPGESKIL 94
>UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L30e -
Methanobacterium thermoautotrophicum
Length = 98
Score = 83.0 bits (196), Expect = 9e-15
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = +1
Query: 235 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGT 414
+G LG K+T+++L+ GK KLV++A N P K +IEYYA L++ V+ + G ++ELG+
Sbjct: 13 TGNVILGSKRTIQSLKLGKGKLVVMASNIPEDLKEDIEYYAKLSEIPVYTHEGTSVELGS 72
Query: 415 ACGKYYRVCTLAITDPGDSDII 480
CGK + V L I DPGDS I+
Sbjct: 73 VCGKPFTVGALLIQDPGDSTIL 94
>UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137,
whole genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_137,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 201
Score = 82.6 bits (195), Expect = 1e-14
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
++SGK +GYKQTLK +R G AKLV I+ N P +RK++IEYYA+LA+ + Y GNN++L
Sbjct: 18 VRSGKITMGYKQTLKAIRNGTAKLVFISNNCPTIRKTQIEYYAMLAQITIVLYQGNNVDL 77
Query: 409 GTACGKYYRVCTLAITDPGDSDII 480
GT G + I G SD I
Sbjct: 78 GT--GVIWEAQLFLIEFMGMSDFI 99
>UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6;
Archaea|Rep: 50S ribosomal protein L30e - Methanopyrus
kandleri
Length = 109
Score = 82.6 bits (195), Expect = 1e-14
Identities = 39/90 (43%), Positives = 59/90 (65%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
+++G LG QT+K L+ GK KLVI+A N P + +IEYYA LA V Y G +++L
Sbjct: 12 VETGDVVLGSNQTIKLLKLGKPKLVIVAANCPAEIREDIEYYAELADVPVFVYPGTSMDL 71
Query: 409 GTACGKYYRVCTLAITDPGDSDIITTLPEA 498
G CG+ + V ++A+ D G+SD+I T+ +A
Sbjct: 72 GDVCGRPHVVASMAVLDDGESDLIATVRKA 101
>UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L30e - Aeropyrum
pernix
Length = 100
Score = 79.4 bits (187), Expect = 1e-13
Identities = 37/95 (38%), Positives = 59/95 (62%)
Frame = +1
Query: 214 ALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSG 393
AL +K+G Y +G+KQ+LK ++ G+AK ++IA+N PP + ++EYYA LA + Y G
Sbjct: 6 ALKDLVKTGVYAMGFKQSLKAVKAGEAKAIVIAENTPPELRRKLEYYAKLAGIPIIVYRG 65
Query: 394 NNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 498
+++G G+ + V LA+ D G S I+ EA
Sbjct: 66 TRMDMGLVMGRRHGVSVLAVIDEGSSRILEQAEEA 100
>UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Pyrobaculum arsenaticum DSM 13514|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Pyrobaculum arsenaticum
(strain DSM 13514 / JCM 11321)
Length = 104
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
+ +G +G+++T + L G KLVIIA NAP K +IEYYA LA + + G++IEL
Sbjct: 15 INTGSVVIGFEETRRALLAGTPKLVIIAANAPKWAKDDIEYYAKLAGIPIFVFPGSSIEL 74
Query: 409 GTACGKYYRVCTLAITDPGDSDII 480
G A + +++ LA+ DPG S+I+
Sbjct: 75 GAAAKRPHKIMALAVIDPGQSEIL 98
>UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4;
Thermoproteaceae|Rep: 50S ribosomal protein L30e -
Pyrobaculum aerophilum
Length = 102
Score = 73.7 bits (173), Expect = 5e-12
Identities = 33/84 (39%), Positives = 54/84 (64%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
+ +GK +G+++T K L G KL+I+A NAP + +IEYYA LA + + G++IEL
Sbjct: 12 INTGKVVIGFEETKKALLTGAPKLIILAANAPKWARDDIEYYAKLAGVPIFVFPGSSIEL 71
Query: 409 GTACGKYYRVCTLAITDPGDSDII 480
G A + +++ LA+ D G S+I+
Sbjct: 72 GAAAKRPHKIMALAVIDAGQSEIL 95
>UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8;
Archaea|Rep: 50S ribosomal protein L30e - Methanococcus
jannaschii
Length = 110
Score = 73.3 bits (172), Expect = 7e-12
Identities = 34/99 (34%), Positives = 60/99 (60%)
Frame = +1
Query: 184 RKRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALL 363
R+R + + A+ + +GK LG K+T+K ++ G+ KLV++A N P + +++YYA L
Sbjct: 2 RRRENMDVNKAIRTAVDTGKVILGSKRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKL 61
Query: 364 AKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 480
+ V+ + ++ELG CGK + V L + D G S+I+
Sbjct: 62 SNIPVYQHKITSLELGAVCGKPFPVAALLVLDEGLSNIM 100
>UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Candidatus Methanoregula boonei 6A8|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanoregula boonei
(strain 6A8)
Length = 97
Score = 72.9 bits (171), Expect = 9e-12
Identities = 35/85 (41%), Positives = 55/85 (64%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
+K+G LG T K +++GKA++V+IA N P +S++ Y L +H + G+++ L
Sbjct: 11 IKTGDVILGQNNTEKCIKEGKAQMVVIAANCPENFRSQLGSYENLF---IHTFEGSSVAL 67
Query: 409 GTACGKYYRVCTLAITDPGDSDIIT 483
G ACGK + V TLAI PG+SDI++
Sbjct: 68 GKACGKPFMVSTLAIVSPGESDILS 92
>UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L30e -
Sulfolobus solfataricus
Length = 108
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/89 (37%), Positives = 53/89 (59%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
+K+GK G K+ +K ++ K K+VI+A K +I +YA L+ V+ Y G+ +L
Sbjct: 19 LKTGKVIFGAKRAIKYIKLSKVKMVIVASTLRGDLKQDIMHYAKLSNIPVYEYKGSGWDL 78
Query: 409 GTACGKYYRVCTLAITDPGDSDIITTLPE 495
GT CGK + + T++I D GDS I+ + E
Sbjct: 79 GTLCGKPFMISTISIIDEGDSKILDIIKE 107
>UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanospirillum hungatei JF-1|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 95
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGV--HHYSGNNI 402
+K+GK LG +T ++ +G AKLV++A N P +E Y L K GV + Y G+ +
Sbjct: 11 IKTGKVILGQNETKDSIEKGSAKLVVVAANCP----AEFSGY-LSGKDGVKTYTYEGSGV 65
Query: 403 ELGTACGKYYRVCTLAITDPGDSDIIT 483
+LG ACGK + V LAI + GDSDI+T
Sbjct: 66 QLGRACGKPFIVSALAIEESGDSDILT 92
>UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L30
- Encephalitozoon cuniculi
Length = 108
Score = 68.1 bits (159), Expect = 3e-10
Identities = 32/102 (31%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Frame = +1
Query: 178 RNRKRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 357
R + +T +L M++GKY +G+K+ +K++ KAK ++I+ N P ++ +EYY+
Sbjct: 2 RGKSNKGDNVTSSLLLAMRTGKYIVGFKRAIKSVIMKKAKCLVISSNFPSTKRKLLEYYS 61
Query: 358 LLA-KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 480
+LA + +S NN ELG+ + +R+ ++I D G++++I
Sbjct: 62 VLAGGLPIIFHSANNEELGSITERGHRLGCISIIDQGEAELI 103
>UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L30E - Uncultured methanogenic archaeon RC-I
Length = 101
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/92 (36%), Positives = 55/92 (59%)
Frame = +1
Query: 205 LTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 384
L +L +++GK +G KQ +K ++G AKLVI+A N P K +I+ A ++
Sbjct: 5 LDKSLRSVVRTGKVLIGTKQAVKASQRGVAKLVIVATNCPGDVKKQIKE----ANIPMYE 60
Query: 385 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 480
+ G +++LG CGK Y V + + +PGDSDI+
Sbjct: 61 FPGMSVDLGPICGKPYVVSAVTVLEPGDSDIM 92
>UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L30e -
Archaeoglobus fulgidus
Length = 86
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
+K+G Y LG K TLK+LR G+AK VI+A N P +I+ Y + Y+G N+EL
Sbjct: 12 LKTGGYRLGSKSTLKSLRNGEAKAVIVASNCPEEVLEKIKSY----DVKILVYNGTNMEL 67
Query: 409 GTACGKYYRVCTLAITD 459
G CGK + V +AIT+
Sbjct: 68 GALCGKPFSVAAMAITE 84
>UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L30e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 103
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
+K+GK +G +T+ G AK+V++A N P K +++ V Y G ++EL
Sbjct: 20 VKTGKVIIGANRTVDAAENGSAKMVVLASNCPADIKKKVQE----TNVPVLEYEGTSVEL 75
Query: 409 GTACGKYYRVCTLAITDPGDSDII 480
G CGK + + +AI D G+SDI+
Sbjct: 76 GPVCGKPFTIAAMAILDAGESDIL 99
>UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanocorpusculum labreanum Z|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
Length = 96
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/89 (34%), Positives = 52/89 (58%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
MK+G+ LG K + + KA+LVIIAKNAP ++ + A ++ + G++ +L
Sbjct: 11 MKTGEVTLGQNSVEKIVAENKAELVIIAKNAPAQIRN---FLAANENVPLYEFDGSSRQL 67
Query: 409 GTACGKYYRVCTLAITDPGDSDIITTLPE 495
G CG+ + + LAI + G+SDI++ E
Sbjct: 68 GKECGRDHMISVLAIVNAGESDILSLKSE 96
>UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanosaeta thermophila PT|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Methanosaeta thermophila (strain
DSM 6194 / PT) (Methanothrixthermophila (strain DSM 6194
/ PT))
Length = 103
Score = 56.4 bits (130), Expect = 9e-07
Identities = 32/94 (34%), Positives = 52/94 (55%)
Frame = +1
Query: 214 ALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSG 393
AL +++GK LG +L+ +G AKL+I A + P + ++ + V+ Y
Sbjct: 7 ALRSSIRTGKVVLGSNSSLEHGLRGDAKLIIYASDCPEHVRQKLRSL----EVPVYAYQS 62
Query: 394 NNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 495
+ +LG ACGK + V LA+ +PGDS+I+ L E
Sbjct: 63 SGRDLGAACGKPFPVAALAVIEPGDSEIMALLRE 96
>UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein L30e
- uncultured marine bacterium HF10_29C11
Length = 99
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/92 (33%), Positives = 48/92 (52%)
Frame = +1
Query: 205 LTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 384
L+ L + +G G +QTL +G A+LV++A N P ++ A + VH
Sbjct: 3 LSRQLKTAIATGSLLFGQRQTLDACARGDARLVLLAANCPSDYIDDLR--ARHPEVTVHQ 60
Query: 385 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 480
N ELG ACGK + + T+ + D GDSD++
Sbjct: 61 APVVNRELGVACGKPFSISTICVLDAGDSDLL 92
>UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:
NEQ179 - Nanoarchaeum equitans
Length = 86
Score = 54.4 bits (125), Expect = 4e-06
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = +1
Query: 238 GKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTA 417
GK +G +TLK L+ G+ V++AKN P K +IEYYA L+ V N ELG A
Sbjct: 13 GKAVIGTNKTLKLLKLGQLSAVVLAKNVPDYIKEDIEYYAKLSNIPVIQVDLFNDELGAA 72
Query: 418 CGKYYRVCTLAI 453
K ++V + I
Sbjct: 73 LKKRFKVSVVGI 84
>UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_45, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 49
Score = 53.6 bits (123), Expect = 6e-06
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +1
Query: 394 NNIELGTACGKYYRVCTLAITDPGDSDIITTLP 492
+N++LGTACGKY++V L+I DPGDSDII +P
Sbjct: 14 DNVDLGTACGKYFQVSCLSIVDPGDSDIIKQMP 46
>UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiella
natans|Rep: Ribosomal protein L30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 102
Score = 49.2 bits (112), Expect = 1e-04
Identities = 30/95 (31%), Positives = 42/95 (44%)
Frame = +1
Query: 169 LQQRNRKRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIE 348
++ N K + Q+ K G K+T+K L K +IIA N K I
Sbjct: 5 IENYNIKLSNDQIILFFKTIKKKNNLVKGKKETIKNLISNKISFLIIASNCLIDTKLHIF 64
Query: 349 YYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAI 453
+Y LL K +SGN+ ELG C ++ C L I
Sbjct: 65 HYCLLYKVKFCFFSGNSKELGQLCDLKHKACILGI 99
>UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44;
Archaea|Rep: 50S ribosomal protein L7Ae - Sulfolobus
solfataricus
Length = 127
Score = 44.4 bits (100), Expect = 0.004
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 232 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA--KTGVHHYSGNNIE 405
+SGK G +T K + +G+AKLVIIA++ P + + + LL K + Y +
Sbjct: 28 ESGKIKKGTNETTKAVERGQAKLVIIAEDVQP--EEIVAHLPLLCDEKKIPYVYVSSKKA 85
Query: 406 LGTACGKYYRVCTLAITDPGDS 471
LG ACG + AI +PG++
Sbjct: 86 LGEACGLQVATASAAILEPGEA 107
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.3 bits (95), Expect = 0.015
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 618 DPDMIRYIDEXGQTTTRMQ 674
DPDMIRYIDE GQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A5KLN0 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus torques ATCC 27756
Length = 93
Score = 40.7 bits (91), Expect = 0.046
Identities = 30/82 (36%), Positives = 39/82 (47%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
MK+GK G T + GKAK VI+A +A K + K Y G+ L
Sbjct: 1 MKAGKCVSGETMTESETKSGKAKFVIVAGDASENTKKKFGDMCKFYKVPFCFY-GDKDTL 59
Query: 409 GTACGKYYRVCTLAITDPGDSD 474
G A GK +R +LAI D G +D
Sbjct: 60 GHAMGKEFR-ASLAILDEGFAD 80
>UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=16; Staphylococcus|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Staphylococcus aureus subsp.
aureus JH9
Length = 105
Score = 39.9 bits (89), Expect = 0.081
Identities = 30/88 (34%), Positives = 41/88 (46%)
Frame = +1
Query: 202 QLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 381
Q+ L M++GK G + +++G KLVI+A +A I K
Sbjct: 5 QILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDASDNTAKLITDKCKSYKVPFR 64
Query: 382 HYSGNNIELGTACGKYYRVCTLAITDPG 465
+ GN ELG A GK RV + ITDPG
Sbjct: 65 KF-GNRNELGIALGKGERV-NVGITDPG 90
>UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Exiguobacterium sibiricum 255-15|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Exiguobacterium
sibiricum 255-15
Length = 96
Score = 39.5 bits (88), Expect = 0.11
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +1
Query: 250 LGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACG 423
+G KQTLK LR GKA VIIA +A K + A A V + + +ELG ACG
Sbjct: 27 VGQKQTLKALRSGKASEVIIADDADEHVKQALLDAAKQANVPVVNVP-SKLELGKACG 83
>UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n=7;
Firmicutes|Rep: Putative ribosomal protein L7Ae-like -
Bacillus halodurans
Length = 82
Score = 38.3 bits (85), Expect = 0.25
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +1
Query: 250 LGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACGKY 429
+G KQTLK L Q + V+IAK+A P +++E A + + + Y + +LG ACG
Sbjct: 14 IGTKQTLKALEQEEVLEVVIAKDAEPRVVNKVEAMASVKQIPI-IYVDSMKKLGKACGID 72
Query: 430 YRVCTLAI 453
T+A+
Sbjct: 73 VGAATVAL 80
>UniRef50_A5ZAJ2 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 101
Score = 37.5 bits (83), Expect = 0.43
Identities = 27/86 (31%), Positives = 39/86 (45%)
Frame = +1
Query: 232 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELG 411
++GK G K ++ KAK+VI++ + K E K V Y G ELG
Sbjct: 13 RAGKTVAGEFSVEKAVKDNKAKVVIVSTESSDNTKKLFENKCKFYKIPVFIY-GTKAELG 71
Query: 412 TACGKYYRVCTLAITDPGDSDIITTL 489
A G R ++A+ DPG S I +
Sbjct: 72 MATGNKER-ASIAVLDPGFSKSIVKM 96
>UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium phytofermentans ISDg
Length = 115
Score = 37.1 bits (82), Expect = 0.57
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = +1
Query: 232 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELG 411
K+G G T K++++GKA +VI+A++A K ++ + G +LG
Sbjct: 25 KAGYVASGEFSTEKSVKEGKACVVIVAEDASENTKKMFRNMCTFYDVPIYIF-GEKTDLG 83
Query: 412 TACGKYYRVCTLAITDPG 465
A GK +R +L+I D G
Sbjct: 84 HAIGKEFR-ASLSINDQG 100
>UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43;
Lactobacillales|Rep: Ribosomal protein L7A family -
Streptococcus pneumoniae
Length = 99
Score = 35.9 bits (79), Expect = 1.3
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +1
Query: 232 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIE----YYALLAKTGVHHYSGNN 399
++G+ G + +K ++ GKAKLV +A +A P +I+ YY + T +
Sbjct: 15 RAGRIISGEELVVKAIQDGKAKLVFLAHDAGPNLTKKIQDKSHYYQVEIVTVF-----ST 69
Query: 400 IELGTACGKYYRVCTLAITDPGDSDIITTLPE 495
+EL A GK +V LA+TD G + + +L E
Sbjct: 70 LELSIAVGKSRKV--LAVTDAGFTKKMRSLME 99
>UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein;
n=2; Clostridia|Rep: Ribosomal protein L7ae family
protein - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 87
Score = 35.5 bits (78), Expect = 1.7
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 250 LGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNI-ELGTACGK 426
+G KQTLK L++GKA V IA +A ++ AL + V + + + ELG +CG
Sbjct: 14 VGTKQTLKALQKGKAIKVFIALDAE--KRVTDPVVALCKEKNVPVETVDTMAELGKSCGI 71
Query: 427 YYRVCTLAITDPG 465
AI DPG
Sbjct: 72 AVGCACAAIIDPG 84
>UniRef50_Q6KZI7 Cluster: 50S ribosomal protein L7Ae; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L7Ae -
Picrophilus torridus
Length = 127
Score = 34.7 bits (76), Expect = 3.0
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 232 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYY--ALLAKTGVHH-YSGNNI 402
K+GK G + +K++ +G++KLV+IA++ P +E+ YY L + V + Y
Sbjct: 26 KTGKVRKGTNEVVKSIERGESKLVVIAEDVSP---AEVVYYLPTLCEERKVPYVYVKKKS 82
Query: 403 ELGTACGKYYRVCTLAITDPGDSD 474
+LG G +++I D G +D
Sbjct: 83 DLGLKVG-IASAASVSIVDYGKND 105
>UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2;
Lactobacillales|Rep: Ribosomal protein L7A family -
Enterococcus faecalis (Streptococcus faecalis)
Length = 101
Score = 34.3 bits (75), Expect = 4.0
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +1
Query: 229 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 408
M++GK G + TLK +R KAK V +A++A + +I+ + V + EL
Sbjct: 15 MRAGKLVTGEELTLKDIRANKAKFVFVAQDASENTRKKIKDKSSYYNVPVSELF-SQFEL 73
Query: 409 GTACGKYYRVCTLAITDPG 465
A G+ V + +TD G
Sbjct: 74 SQAIGRPRMV--IGVTDAG 90
>UniRef50_Q81Y70 Cluster: Acetyl-CoA acetyltransferase; n=11;
Bacillus|Rep: Acetyl-CoA acetyltransferase - Bacillus
anthracis
Length = 363
Score = 34.3 bits (75), Expect = 4.0
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 247 CLGYKQTLKTLRQGKAKLVIIAKNA--PPLRKSEIEYYALLAKTGVHHYSGNNIELGTAC 420
CL YK+TL+ L +G I++ N K E+ Y ++ +T + G +C
Sbjct: 157 CLSYKRTLQALAKGYIHEEILSFNGLLDESIKPEMNYERIIKRTKPAFLHNGTVTAGNSC 216
Query: 421 GKYYRVCTLAITDPGDS 471
G C + + + G +
Sbjct: 217 GVNDGACAVLVMEEGQA 233
>UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Moorella thermoacetica ATCC 39073|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Moorella thermoacetica
(strain ATCC 39073)
Length = 102
Score = 34.3 bits (75), Expect = 4.0
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +1
Query: 232 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELG 411
++GK GY+ + LR K +LV++A++ P K+ I + + Y N ELG
Sbjct: 13 RAGKIVWGYQAVVAALRSQKVELVLLARDGSPGLKTRILRFCREYRRQGLLYGYKN-ELG 71
Query: 412 TACGKYYRVCTLAITDPGDSDII 480
A GK + ITD + II
Sbjct: 72 AALGK-PPCAVVGITDKNFAFII 93
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 34.3 bits (75), Expect = 4.0
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 235 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 333
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum
aestivum|Rep: Ribosomal protein L30 - Triticum aestivum
(Wheat)
Length = 75
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 175 QRNRKRPSSQLTPALPWXMKSGKYCLGYKQTLK 273
Q +R+R + L MKSGKY LGYK LK
Sbjct: 21 QXSRRRARRNINNKLQLVMKSGKYTLGYKTVLK 53
>UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 117
Score = 33.5 bits (73), Expect = 7.0
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +1
Query: 232 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELG 411
K+ K GY+ + L+ GKA+LVI+A++A K + K + + G LG
Sbjct: 15 KANKLAAGYESCERLLKAGKAELVIVAEDASQNTKKKFIDACNYRKVDIRIF-GKKELLG 73
Query: 412 TACGKYYRVCTLAITDPG 465
GK R +A+ D G
Sbjct: 74 KFIGKDIR-SVIAVLDRG 90
>UniRef50_A5E3R8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1105
Score = 33.5 bits (73), Expect = 7.0
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 29 NSLRFENFILVSIALTALNKSFYNTYKGYLNTLFYFRIH*HLRFQNGCSKETEKDHRVN 205
+++ F NF+L L NKSF + Y YL IH ++F N T+ + +N
Sbjct: 254 SAIAFSNFLLRPENLRLTNKSFKSDYASYLTIDINECIHLQIQFPNASDTNTQVNDFIN 312
>UniRef50_A2BJ73 Cluster: Ferrous iron transport protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Ferrous iron
transport protein - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 717
Score = 33.5 bits (73), Expect = 7.0
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 250 LGYKQTLKTLRQGK-AKLVIIAKNAPPLRKSEIEYYALLAKTG-VHHYSGNNIELGTACG 423
+G+K KTL++GK KLV+ P + KS + + L KT V ++ G +EL A
Sbjct: 5 IGHKSGTKTLQKGKDCKLVVALVGNPNVGKSTL-FNTLTGKTAHVANWPGVTVELEAAVS 63
Query: 424 KY 429
+Y
Sbjct: 64 RY 65
>UniRef50_A0RUR4 Cluster: Ribosomal protein L30E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L30E - Cenarchaeum
symbiosum
Length = 101
Score = 33.5 bits (73), Expect = 7.0
Identities = 25/98 (25%), Positives = 45/98 (45%)
Frame = +1
Query: 205 LTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 384
L AL +K + +G KQ ++ +K++++++ EI A A
Sbjct: 5 LEKALRDAVKEDRCTIGAKQVAGAIKG--SKMIVLSRLRQGNDTGEITRGAEEAGVPTVS 62
Query: 385 YSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 498
+ G+++ LG CG YRV ++I ++ I L EA
Sbjct: 63 FEGSSVALGRLCGLQYRVSAISIDAMPEAGIKPILEEA 100
>UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7;
Archaea|Rep: 50S ribosomal protein L7Ae - Pyrobaculum
aerophilum
Length = 151
Score = 33.5 bits (73), Expect = 7.0
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 232 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA--KTGVHHYSGNNIE 405
++GK G +T K + +G AKLV+IA++ P + + LL K + Y + +
Sbjct: 43 QTGKIKKGTNETTKAVERGLAKLVLIAEDVDP--PEVVAHLPLLCEEKKVPYVYVPSKEK 100
Query: 406 LGTACGKYYRVCTLAITDPGDS 471
LG A G + +PG +
Sbjct: 101 LGKAAGINVSAAAAVVIEPGQA 122
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.1 bits (72), Expect = 9.3
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = -3
Query: 776 KMNAIVXXNLFIAAYNGYX*SNSITNFTNKAFFSLHSSCGLSXLINVSYHVWIXL 612
+MNA V FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,525,565
Number of Sequences: 1657284
Number of extensions: 10497171
Number of successful extensions: 22904
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 22299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22891
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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