BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_M22
(862 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118425-1|AAM48454.1| 111|Drosophila melanogaster RH09938p pro... 165 5e-41
AY071208-1|AAL48830.1| 111|Drosophila melanogaster RE25263p pro... 165 5e-41
AE014134-3014|AAN11021.1| 111|Drosophila melanogaster CG10652-P... 165 5e-41
AE014134-3013|AAF53738.1| 111|Drosophila melanogaster CG10652-P... 165 5e-41
AY069511-1|AAL39656.1| 438|Drosophila melanogaster LD23157p pro... 29 6.2
AE014296-3335|AAO41278.1| 438|Drosophila melanogaster CG5605-PG... 29 6.2
AE014296-3334|AAN12123.1| 438|Drosophila melanogaster CG5605-PF... 29 6.2
AE014296-3333|AAN12122.1| 438|Drosophila melanogaster CG5605-PE... 29 6.2
AE014296-3332|AAN12121.1| 438|Drosophila melanogaster CG5605-PC... 29 6.2
AE014296-3331|AAF51575.2| 438|Drosophila melanogaster CG5605-PB... 29 6.2
AE014296-3330|AAF51574.2| 438|Drosophila melanogaster CG5605-PA... 29 6.2
>AY118425-1|AAM48454.1| 111|Drosophila melanogaster RH09938p
protein.
Length = 111
Score = 165 bits (402), Expect = 5e-41
Identities = 78/107 (72%), Positives = 86/107 (80%)
Frame = +1
Query: 178 RNRKRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 357
+ +K+ L MKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEIEYYA
Sbjct: 5 KKQKKALESTNARLELVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYA 64
Query: 358 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 498
+LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L A
Sbjct: 65 MLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111
Score = 35.9 bits (79), Expect = 0.072
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3
Query: 165 MVAAKKQKKTIESINSRLALXDEIGKILLRIQANFENSSTRQSKA 299
MVA KKQKK +ES N+RL L + GK L + + + RQ KA
Sbjct: 1 MVAVKKQKKALESTNARLELVMKSGKYCLGYKQTLK--TLRQGKA 43
>AY071208-1|AAL48830.1| 111|Drosophila melanogaster RE25263p
protein.
Length = 111
Score = 165 bits (402), Expect = 5e-41
Identities = 78/107 (72%), Positives = 86/107 (80%)
Frame = +1
Query: 178 RNRKRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 357
+ +K+ L MKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEIEYYA
Sbjct: 5 KKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYA 64
Query: 358 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 498
+LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L A
Sbjct: 65 MLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111
Score = 37.9 bits (84), Expect = 0.018
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +3
Query: 165 MVAAKKQKKTIESINSRLALXDEIGKILLRIQANFENSSTRQSKA 299
MVA KKQKK +ES N+RLAL + GK L + + + RQ KA
Sbjct: 1 MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLK--TLRQGKA 43
>AE014134-3014|AAN11021.1| 111|Drosophila melanogaster CG10652-PB,
isoform B protein.
Length = 111
Score = 165 bits (402), Expect = 5e-41
Identities = 78/107 (72%), Positives = 86/107 (80%)
Frame = +1
Query: 178 RNRKRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 357
+ +K+ L MKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEIEYYA
Sbjct: 5 KKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYA 64
Query: 358 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 498
+LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L A
Sbjct: 65 MLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111
Score = 37.9 bits (84), Expect = 0.018
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +3
Query: 165 MVAAKKQKKTIESINSRLALXDEIGKILLRIQANFENSSTRQSKA 299
MVA KKQKK +ES N+RLAL + GK L + + + RQ KA
Sbjct: 1 MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLK--TLRQGKA 43
>AE014134-3013|AAF53738.1| 111|Drosophila melanogaster CG10652-PA,
isoform A protein.
Length = 111
Score = 165 bits (402), Expect = 5e-41
Identities = 78/107 (72%), Positives = 86/107 (80%)
Frame = +1
Query: 178 RNRKRPSSQLTPALPWXMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 357
+ +K+ L MKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEIEYYA
Sbjct: 5 KKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYA 64
Query: 358 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 498
+LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L A
Sbjct: 65 MLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111
Score = 37.9 bits (84), Expect = 0.018
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +3
Query: 165 MVAAKKQKKTIESINSRLALXDEIGKILLRIQANFENSSTRQSKA 299
MVA KKQKK +ES N+RLAL + GK L + + + RQ KA
Sbjct: 1 MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLK--TLRQGKA 43
>AY069511-1|AAL39656.1| 438|Drosophila melanogaster LD23157p
protein.
Length = 438
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 235 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 384
+GKYC G + TL+ L G + +I +N +++ ++ +A T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346
>AE014296-3335|AAO41278.1| 438|Drosophila melanogaster CG5605-PG,
isoform G protein.
Length = 438
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 235 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 384
+GKYC G + TL+ L G + +I +N +++ ++ +A T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346
>AE014296-3334|AAN12123.1| 438|Drosophila melanogaster CG5605-PF,
isoform F protein.
Length = 438
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 235 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 384
+GKYC G + TL+ L G + +I +N +++ ++ +A T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346
>AE014296-3333|AAN12122.1| 438|Drosophila melanogaster CG5605-PE,
isoform E protein.
Length = 438
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 235 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 384
+GKYC G + TL+ L G + +I +N +++ ++ +A T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346
>AE014296-3332|AAN12121.1| 438|Drosophila melanogaster CG5605-PC,
isoform C protein.
Length = 438
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 235 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 384
+GKYC G + TL+ L G + +I +N +++ ++ +A T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346
>AE014296-3331|AAF51575.2| 438|Drosophila melanogaster CG5605-PB,
isoform B protein.
Length = 438
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 235 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 384
+GKYC G + TL+ L G + +I +N +++ ++ +A T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346
>AE014296-3330|AAF51574.2| 438|Drosophila melanogaster CG5605-PA,
isoform A protein.
Length = 438
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 235 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 384
+GKYC G + TL+ L G + +I +N +++ ++ +A T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,962,388
Number of Sequences: 53049
Number of extensions: 507643
Number of successful extensions: 1041
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -