Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_M19
         (954 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q170U6 Cluster: Putative uncharacterized protein; n=1; ...    46   0.002
UniRef50_UPI00015B59A0 Cluster: PREDICTED: similar to brain chit...    41   0.053
UniRef50_P25028 Cluster: Mitosis initiation protein fs(1)Ya; n=2...    41   0.053
UniRef50_P34303 Cluster: Putative zinc finger protein C06E1.8; n...    39   0.16 
UniRef50_A3RMS4 Cluster: Hsn abnormal migration protein 2, isofo...    35   2.7  

>UniRef50_Q170U6 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 703

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
 Frame = +2

Query: 239 MKPDPKACCVICQLVFCCGDCRQRHE----KFVHGLTYDCPICRGSNYLCNPQ---TLTE 397
           MK   +  C  C  VFCC  CRQ+HE    + V  +   C IC    +        T + 
Sbjct: 1   MKIPKEVQCRTCGQVFCCAKCRQKHEDKSHQEVQAIRQICYICNNRPFPLRTDTKITTSN 60

Query: 398 DLIKHIFLEHLPL 436
            LI+H+  EHLPL
Sbjct: 61  VLIQHLMTEHLPL 73


>UniRef50_UPI00015B59A0 Cluster: PREDICTED: similar to brain
           chitinase and chia; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to brain chitinase and chia - Nasonia
           vitripennis
          Length = 1914

 Score = 40.7 bits (91), Expect = 0.053
 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = +2

Query: 254 KACCVICQLVFCCGDCRQRHEKFVHGLTYDCPICRGS----NYLCNPQTLTE-DLIKHIF 418
           K  C IC  VFCC DCR +HE   H     C +C              +L + +L+ H+ 
Sbjct: 6   KNSCRICLKVFCCADCRDKHENSKHPKP-KCSLCVRQALPFGVASEEDSLKKSELLCHLV 64

Query: 419 LEHLPL 436
             HLPL
Sbjct: 65  FNHLPL 70


>UniRef50_P25028 Cluster: Mitosis initiation protein fs(1)Ya; n=2;
           Sophophora|Rep: Mitosis initiation protein fs(1)Ya -
           Drosophila melanogaster (Fruit fly)
          Length = 696

 Score = 40.7 bits (91), Expect = 0.053
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 233 LKMKPDPKACCVICQLVFCCGDCRQRHEKFVHGLTYDCPI 352
           L M+   +  C IC+ VFCCG CRQ+H+   H +    P+
Sbjct: 7   LIMRQPDEGKCHICKRVFCCGKCRQKHQFKAHAIAVREPL 46


>UniRef50_P34303 Cluster: Putative zinc finger protein C06E1.8; n=2;
           Caenorhabditis|Rep: Putative zinc finger protein C06E1.8
           - Caenorhabditis elegans
          Length = 397

 Score = 39.1 bits (87), Expect = 0.16
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +2

Query: 227 IELKMKPDPKAC--CVICQLVFCCGDCRQRHEKFVHGLTYDCPICRGSNYLCNPQTLTED 400
           +ELK +PD K    C IC  VFC      RH    H  +Y C +CR         + +E 
Sbjct: 40  VELK-RPDLKGSFRCSICSKVFCHSSSLSRHRMQAHFKSYKCTVCR------KDISSSES 92

Query: 401 LIKHIFLEH 427
           L  H+F +H
Sbjct: 93  LRTHMFKQH 101


>UniRef50_A3RMS4 Cluster: Hsn abnormal migration protein 2, isoform
           b; n=4; Caenorhabditis|Rep: Hsn abnormal migration
           protein 2, isoform b - Caenorhabditis elegans
          Length = 392

 Score = 35.1 bits (77), Expect = 2.7
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +2

Query: 230 ELKMKPDPKAC--CVICQLVFCCGDCRQRHEKFVHGLTYDCPIC 355
           ELK +PD K    C ICQ VFC      RH    H  +Y C  C
Sbjct: 6   ELK-RPDLKGSFPCSICQKVFCHSSSLSRHRMQAHFKSYTCTTC 48


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,813,647
Number of Sequences: 1657284
Number of extensions: 10456907
Number of successful extensions: 26181
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26166
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88182286632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)