Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_M19
         (954 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    32   0.029
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   4.5  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    25   4.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   7.8  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 31.9 bits (69), Expect = 0.029
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = -2

Query: 368  SWSLCRSGSRKSSRARTFRVSGGSRHSRKQVDRSHSKPS 252
            S S  RSGS K SR+R+   SGGSR   +   RS S  S
Sbjct: 1103 SRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGS 1141


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
 Frame = +2

Query: 176 CYEC-LCGVREV*F*NEAIELKMKPDPKAC-CVICQLVFCCGDCRQRHEKFVHGLTYDCP 349
           CY C  C    +   +    L +  D K   C  C   F      +RH  + H   Y  P
Sbjct: 354 CYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAP 413

Query: 350 ICRGSNYLC----NPQTLTEDLIKHIFLEHLPLLLQKV*QAIQ 466
             +   ++C     P     +LI+H+ +      + K  +A++
Sbjct: 414 TPKAKTHICPTCKRPFRHKGNLIRHMAMHDPESTVSKEMEALR 456


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 55  NDFDXRHAKLKCVXKNYKRYS 117
           NDF+ +   + C+ +NY  YS
Sbjct: 205 NDFEGQAVLINCLLRNYLHYS 225


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +2

Query: 290 CGDCRQRHEKFVHGLTYD-CPIC 355
           CGDC Q  + F +G   D C  C
Sbjct: 519 CGDCHQECKDFCYGPNEDNCGSC 541


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,539
Number of Sequences: 2352
Number of extensions: 10846
Number of successful extensions: 67
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)