Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_M16
(869 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=8... 316 4e-85
UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2; n... 295 7e-79
UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep: CG1026... 251 2e-65
UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2... 245 1e-63
UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1... 241 1e-62
UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp; ... 223 5e-57
UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1... 221 1e-56
UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1... 216 7e-55
UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=1... 211 2e-53
UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA... 203 4e-51
UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4... 201 2e-50
UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen, put... 190 5e-47
UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6... 181 2e-44
UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6... 181 2e-44
UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=1... 181 2e-44
UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n... 179 1e-43
UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8... 177 2e-43
UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2... 167 2e-40
UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1... 167 4e-40
UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n... 159 8e-38
UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n... 145 1e-33
UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n... 138 2e-31
UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear ant... 137 4e-31
UniRef50_UPI000049949B Cluster: proliferating cell nuclear antig... 135 1e-30
UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3... 130 4e-29
UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen, put... 125 2e-27
UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp; ... 118 1e-25
UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1... 109 1e-22
UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1... 103 4e-21
UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;... 100 4e-20
UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n... 100 1e-19
UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n... 92 1e-17
UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1... 91 3e-17
UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1... 90 6e-17
UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3; Meth... 86 1e-15
UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PC... 84 5e-15
UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2... 84 5e-15
UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8; cell... 76 1e-12
UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;... 75 3e-12
UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1; H... 75 3e-12
UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;... 74 5e-12
UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1; Cald... 68 4e-10
UniRef50_UPI00015BB110 Cluster: proliferating cell nuclear antig... 67 5e-10
UniRef50_Q8QNE7 Cluster: EsV-1-132; n=2; Phaeovirus|Rep: EsV-1-1... 67 5e-10
UniRef50_O29912 Cluster: DNA polymerase sliding clamp; n=1; Arch... 66 1e-09
UniRef50_Q7T6Y0 Cluster: Probable DNA polymerase sliding clamp; ... 63 1e-08
UniRef50_A4YIY6 Cluster: DNA polymerase sliding clamp; n=1; Meta... 62 1e-08
UniRef50_P38252 Cluster: Putative uncharacterized protein YBR089... 61 3e-08
UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7; Ther... 61 4e-08
UniRef50_Q8ZTY0 Cluster: DNA polymerase sliding clamp A; n=4; Py... 61 4e-08
UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1; Stap... 59 1e-07
UniRef50_A1RXU8 Cluster: DNA polymerase sliding clamp; n=1; Ther... 59 1e-07
UniRef50_Q9YEZ5 Cluster: DNA polymerase sliding clamp B2; n=1; A... 56 9e-07
UniRef50_Q4JAI6 Cluster: DNA polymerase sliding clamp 1; n=6; Su... 56 9e-07
UniRef50_Q5UQH4 Cluster: Uncharacterized protein L823; n=1; Acan... 54 4e-06
UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa calif... 54 5e-06
UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n... 54 6e-06
UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1; Meth... 52 3e-05
UniRef50_UPI00015BB244 Cluster: DNA polymerase sliding clamp sub... 51 4e-05
UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5; Ther... 48 4e-04
UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2; Nano... 47 7e-04
UniRef50_A4YCS6 Cluster: Putative uncharacterized protein; n=1; ... 42 0.015
UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9; ... 36 1.8
UniRef50_Q9NA32 Cluster: Putative uncharacterized protein; n=3; ... 36 1.8
UniRef50_Q7D6X4 Cluster: Substrate--CoA ligase, putative; n=13; ... 35 2.3
UniRef50_A7C6V8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n... 34 4.1
UniRef50_Q550G9 Cluster: Proliferating cell nuclear antigen fami... 34 4.1
UniRef50_A5K9Z2 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q8PVV8 Cluster: Geranylgeranyl reductase; n=5; Methanos... 34 5.4
UniRef50_Q1V1F8 Cluster: Putative uncharacterized protein; n=2; ... 33 7.1
UniRef50_Q5JH70 Cluster: Oligosaccharyl transferase, STT3 subuni... 33 7.1
UniRef50_P38947 Cluster: Succinate-semialdehyde dehydrogenase [N... 33 9.4
>UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=83;
Eukaryota|Rep: Proliferating cell nuclear antigen - Homo
sapiens (Human)
Length = 261
Score = 316 bits (777), Expect = 4e-85
Identities = 144/228 (63%), Positives = 186/228 (81%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
LD+E LGIPE EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNI 180
Query: 711 KLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQLS 854
KL+QT+++DK LTFA +YLN+FTKAT L V LS
Sbjct: 181 KLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLS 228
>UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2;
n=60; Eukaryota|Rep: Proliferating cell nuclear antigen
2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 264
Score = 295 bits (725), Expect = 7e-79
Identities = 136/231 (58%), Positives = 175/231 (75%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M E RL++ S+LKKVLEA+KDL+ A FDC G LQAMD+SHV+LVSL LR++GF+ Y
Sbjct: 1 MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCDRN+SMGMNLG+MSK+LKCAG+ D +TIKA D +D VTF+FESP Q+K++D+EMKLM+
Sbjct: 61 RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
+D EHLGIP+ EY +RMPS EF+RIC+DLS G+++VIS TKEGVKFS GDIG+AN+
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180
Query: 711 KLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQLSXVS 863
L Q ++DK +L+FA +Y+N FTKAT L V +S S
Sbjct: 181 VLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSETVTISLSS 231
>UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep:
CG10262-PA - Drosophila melanogaster (Fruit fly)
Length = 255
Score = 251 bits (615), Expect = 2e-65
Identities = 112/227 (49%), Positives = 169/227 (74%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDNSHVSLV+L+L +D F+K+
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKF 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
CDRN+S+G++L S+ K+LKCA D VTIKA D + +T FES +E+ +DYE+KL+N
Sbjct: 61 HCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLN 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
LD +H+ IP+ +Y+C I++PSSEFARICRD+S F ES+ I+C+ +G++F A GD+G+AN+
Sbjct: 121 LDQDHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESLTIACSSKGIRFLAKGDLGTANI 180
Query: 711 KLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
+L+ ++D T +FA +YLN FTKAT L +V+L
Sbjct: 181 QLSAGTAMD-----VSIEVQEPVTQSFAGRYLNTFTKATPLADRVKL 222
>UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2;
Sclerotiniaceae|Rep: Proliferating cell nuclear antigen
- Botryotinia fuckeliana B05.10
Length = 259
Score = 245 bits (599), Expect = 1e-63
Identities = 115/227 (50%), Positives = 161/227 (70%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M EARL ++ +LKKV++AIKDL+ FDC+D+GI LQAMDNSHV+LVS+ L+A+GF Y
Sbjct: 1 MLEARLEQADLLKKVVDAIKDLVQDCNFDCNDSGIALQAMDNSHVALVSMMLKAEGFSPY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCDRN+++G+NL S++K+L+ A ++D +TIKA+D D + VFES +++S+Y++KLM+
Sbjct: 61 RCDRNVALGVNLTSLTKVLRAAQNEDILTIKAEDAPDVLNLVFESSESDRLSEYDLKLMD 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
+D EHLGIP+TEY+ I MPSSEF RIC DL ES+ I +K+GVKFS GDIG+ V
Sbjct: 121 IDQEHLGIPDTEYAAVINMPSSEFKRICVDLMALSESVSIEASKDGVKFSCAGDIGNGAV 180
Query: 711 KLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
L +++DK +LTF+ +YL F KA L V+L
Sbjct: 181 TLRSHSNVDKPDLNVDIELTEPVSLTFSLKYLVNFCKAAGLSKSVKL 227
>UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1;
Filobasidiella neoformans|Rep: Proliferating cell
nuclear antigen - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 343
Score = 241 bits (591), Expect = 1e-62
Identities = 107/190 (56%), Positives = 147/190 (77%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M EAR+ ++ +LKK+L+AIK+L++ DC + GI LQAMDNSH++LV+L L A FD+Y
Sbjct: 1 MLEARVKQAVVLKKLLDAIKELVSDGNLDCTEEGISLQAMDNSHIALVALKLEASEFDEY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCDRN+ +G+NL S++KILKCA D D VT+KA D+AD + +FESP +++V +YEMKLM+
Sbjct: 61 RCDRNMPLGVNLASLTKILKCAKDTDVVTLKASDDADALNLIFESPKEDRVGEYEMKLMD 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
+D EHLGIP+T+Y T+ M S+EFARICRDL+ GES+ I C+KEGV FSA G++G +V
Sbjct: 121 IDQEHLGIPDTQYDATVSMSSAEFARICRDLAVLGESVKIECSKEGVTFSADGEVGKGSV 180
Query: 711 KLAQTASIDK 740
L Q A D+
Sbjct: 181 LLRQNAGQDR 190
>UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Autographa californica nuclear
polyhedrosis virus (AcMNPV)
Length = 256
Score = 223 bits (545), Expect = 5e-57
Identities = 103/227 (45%), Positives = 152/227 (66%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
MFEA ++LK+++E KDLL ATFDCD+ G+ +Q MD SHV+LVSL L A+GF KY
Sbjct: 1 MFEAEFKTGAVLKRLVETFKDLLPHATFDCDNRGVSMQVMDTSHVALVSLQLHAEGFKKY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCDRN+ + +++ S+SKI+KC ++ +V +KA+D D + FVF N ++ Y +KLM
Sbjct: 61 RCDRNVPLNVSINSLSKIVKCVNERSSVLMKAEDQGDVMAFVFN--NDNRICTYTLKLMC 118
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
+D+EHLGIP+++Y C + M S EFA++C+D++QF +++SC+K+G++F A GDIGSA+V
Sbjct: 119 IDVEHLGIPDSDYDCVVHMSSVEFAQVCKDMTQFDHDIIVSCSKKGLQFRANGDIGSADV 178
Query: 711 KLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
++ S D T TFA YL +F KA L P V +
Sbjct: 179 QM----SADN-ENFSVLKAKQTVTHTFAGDYLCHFAKAAPLAPTVTI 220
>UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1;
Coprinopsis cinerea|Rep: Proliferating cell nuclear
antigen - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 368
Score = 221 bits (541), Expect = 1e-56
Identities = 99/185 (53%), Positives = 140/185 (75%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M EA+L + +LKK+L+AIK+L+T A F+C++ GI LQAMDNSHV+LV++ + GF +Y
Sbjct: 1 MLEAKLAEAGLLKKLLDAIKELVTDANFECNEEGINLQAMDNSHVALVAVKILVSGFKRY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCDR + +G+NLGS++K+LKCA D D T+KA D AD + ++E+ N +++++YEMKLM
Sbjct: 61 RCDRPMPLGVNLGSLTKVLKCAKDDDICTLKAADEADVLNLIYEAKNSDRIAEYEMKLME 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
+D + L IP+TEY + MPSSEFARI RDLSQ GES+ I +KEGV+F+A G+ + NV
Sbjct: 121 IDADALTIPDTEYEARVTMPSSEFARIVRDLSQLGESVRIEVSKEGVRFAAEGESANGNV 180
Query: 711 KLAQT 725
L QT
Sbjct: 181 LLRQT 185
>UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1;
Ustilago maydis|Rep: Proliferating cell nuclear antigen
- Ustilago maydis (Smut fungus)
Length = 289
Score = 216 bits (527), Expect = 7e-55
Identities = 95/184 (51%), Positives = 138/184 (75%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M EARL + +LKKVL+A+++L+T A F+C ++GI+LQAMDNSHV+L ++ LR D F+++
Sbjct: 1 MLEARLPEAVLLKKVLDAVRELITDANFECSEDGIRLQAMDNSHVALSAIELRTDCFEEF 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCDR +S+G++L S+ KILK A + D + +K D+ D + FESP ++V ++EMKLM+
Sbjct: 61 RCDRPMSIGVSLSSLGKILKSANNDDVLALKKSDDGDTLQMTFESPKSDRVGEFEMKLMD 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
+D EHLGIP+T+Y ++M S EF RICRDL+ GES+ I +KEGV FSA G+IG+A +
Sbjct: 121 IDSEHLGIPDTQYDAVVKMSSGEFGRICRDLANIGESVKIEVSKEGVSFSAEGEIGAARM 180
Query: 711 KLAQ 722
L Q
Sbjct: 181 TLKQ 184
>UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=16;
Dinophyceae|Rep: Proliferating cell nuclear antigen -
Pyrocystis lunula (Dinoflagellate)
Length = 259
Score = 211 bits (515), Expect = 2e-53
Identities = 100/225 (44%), Positives = 149/225 (66%)
Frame = +3
Query: 177 EARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC 356
EA L ++ +LKKV++AIKDL FDC + G+Q+Q+MD+SHV+LVSL LR F ++RC
Sbjct: 4 EAHLQQAVLLKKVVDAIKDLCKDVNFDCSEKGLQVQSMDSSHVALVSLLLRESAFAEFRC 63
Query: 357 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 536
DR S+GMN+ S++KILK G D++ ++ + +AD V+F ES +++++D+E+KLM ++
Sbjct: 64 DRPTSLGMNVDSLAKILKMCGTSDSLKLRWRGDADMVSFQCESGEEDRIADFELKLMQIE 123
Query: 537 LEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKL 716
EH+ IPE Y + ++PSSEF +ICRDL +FGE+M + +KEG+ FS GD+G+ NV L
Sbjct: 124 SEHMEIPEQHYKVSAKLPSSEFQKICRDLKEFGETMQVKASKEGITFSVQGDMGAGNVML 183
Query: 717 AQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
+ +K T TFA +YL F KA L V+L
Sbjct: 184 -KPREAEKPEDKVTLSVHEPVTATFALRYLVNFAKAAPLSGTVEL 227
>UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA;
n=2; Cryptosporidium|Rep: Proliferating cell nuclear
antigen PCNA - Cryptosporidium parvum Iowa II
Length = 262
Score = 203 bits (496), Expect = 4e-51
Identities = 94/228 (41%), Positives = 149/228 (65%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
MFEARL IL+KV EAI +L++ +C+++G+ +QAMDNSHVSLV L L+ F++Y
Sbjct: 1 MFEARLSNGGILRKVFEAITNLVSDVNLECNESGVTIQAMDNSHVSLVGLYLKDTAFERY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCD+N ++G+N ++ K+LK + D V ++ D+++++ F+FE+PN ++VS++E+ L++
Sbjct: 61 RCDKNRTLGLNTQNVVKLLKLCSNDDQVLLRHDDDSESLIFIFETPNGDRVSEFELTLIS 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
+D + L IPET +S + MPS+EF R+CRD++QF +S+ I T + V+FS G +GS ++
Sbjct: 121 IDQDSLQIPETSFSSVVTMPSNEFQRLCRDMAQFSDSLSIDVTSKNVRFSTKGSLGSGSI 180
Query: 711 KLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQLS 854
L D L F+ +YLN F KAT L V+LS
Sbjct: 181 ILRPKEGADS--EAVALDVSEPCQLVFSLRYLNNFAKATPLSNSVKLS 226
>UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4;
Paramecium tetraurelia|Rep: Proliferating cell nuclear
antigen - Paramecium tetraurelia
Length = 259
Score = 201 bits (490), Expect = 2e-50
Identities = 95/229 (41%), Positives = 147/229 (64%), Gaps = 1/229 (0%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
MFEA+ + KK++EAIK+L+ + + GI LQAMD SHV+LV+L L GF KY
Sbjct: 1 MFEAKFEDGVLFKKIVEAIKELVKNVNLEANGTGISLQAMDTSHVALVALQLNEKGFKKY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQ-DNADNVTFVFESPNQEKVSDYEMKLM 527
RC+++++MG+++ ++ KILKC+G+ D +T++ Q + ++F FES N ++S++++ LM
Sbjct: 61 RCEKSLTMGLSIENLQKILKCSGNDDQITLRTQEEEPTTLSFTFESKN--RISEFQLNLM 118
Query: 528 NLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSAN 707
+LD E LG+P+T+YS I+MPS+EF +ICR+L E++ I +K+G+KF GDIG
Sbjct: 119 SLDQEQLGVPDTDYSSVIKMPSNEFTKICRELGNINEAIGIETSKDGIKFYVKGDIGEGQ 178
Query: 708 VKLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQLS 854
V + +K L+FA +Y N F KA +L PQV LS
Sbjct: 179 VSVKSNDG-EKKEERVECDVDEPVNLSFAVRYFNLFNKAAALSPQVILS 226
>UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 263
Score = 190 bits (462), Expect = 5e-47
Identities = 89/227 (39%), Positives = 139/227 (61%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M E RL LKK+L+A++DL+ +A +C + G+ LQAMD +HV+LVS+ L A+GF+KY
Sbjct: 1 MVECRLTNPGNLKKILDALRDLVEEANIECSETGLSLQAMDTAHVALVSMNLNANGFEKY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
C +N S+G+NLG++ KILKC + D +T++ ++ + F FE+ + ++ +++M LM+
Sbjct: 61 NCAQNTSLGVNLGAIQKILKCGDNNDVLTLETNEDQSCLKFKFENSSSDRYFEFQMNLMD 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
+ EHL IP+ E TI + SEF +ICRDL+QFG+++ I+ K V F+ G + +
Sbjct: 121 ISSEHLSIPDAEPEATITLGCSEFQKICRDLAQFGDTVKITVEKSRVSFAVAGTNTNCCL 180
Query: 711 KLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
+ S K L+FA +YLN FTKA L V+L
Sbjct: 181 NYSNFESAGKDGSQVTIQCEDKIELSFALRYLNLFTKAAPLSENVKL 227
>UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6;
Trypanosomatidae|Rep: Proliferating cell nuclear antigen
- Leishmania major
Length = 293
Score = 181 bits (441), Expect = 2e-44
Identities = 79/190 (41%), Positives = 132/190 (69%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M EA++ +S+ K+++E I L+ +A FDC+ G+ +QAMD+SHV+LV + LR D F KY
Sbjct: 1 MLEAQVQYASLWKRLVECINGLVNEANFDCNPGGLSIQAMDSSHVALVHMLLRDDCFVKY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
+C+RNI +G+NL S+SK+LK D+++++ D++D VT E+P + + +Y++KL+
Sbjct: 61 QCERNIILGLNLASLSKVLKIVDGNDSLSLRHDDDSDVVTLTSENPEKTRKCEYQLKLLE 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
++ E +GIPE +Y T+ + S+EFA+I RD+ FG+++ I+ +KEGVKFS++GD+G
Sbjct: 121 IEAESMGIPEMDYRSTVTLNSAEFAKIVRDMQVFGDTVTIAISKEGVKFSSSGDVGQGYT 180
Query: 711 KLAQTASIDK 740
L D+
Sbjct: 181 FLQAAGVSDR 190
>UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6;
Eukaryota|Rep: Proliferating cell nuclear antigen -
Caenorhabditis elegans
Length = 229
Score = 181 bits (441), Expect = 2e-44
Identities = 84/195 (43%), Positives = 127/195 (65%), Gaps = 1/195 (0%)
Frame = +3
Query: 273 IQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQD 452
+ LQAMD+SHV+LVSL L FD YRCDR I++G++L +MSK LKCA + DT +K ++
Sbjct: 1 MSLQAMDSSHVALVSLKLEVGLFDTYRCDRTINLGLSLANMSKALKCANNDDTCMLKYEE 60
Query: 453 N-ADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQ 629
N D++ F F P ++K D +K+M++D EHLGIP+ +Y+ MP+ EF + C+DLS
Sbjct: 61 NEGDSIIFTFADPKRDKTQDVTVKMMDIDSEHLGIPDQDYAVVCEMPAGEFQKTCKDLST 120
Query: 630 FGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTFACQYLN 809
F +S+ I+ TK G+ F+ GDIGS+ V + +++ D + F+ +Y+N
Sbjct: 121 FSDSLNITATKAGIVFTGKGDIGSSVVTYSPSSNTDDETEAVTLEVKDPVNVNFSIKYMN 180
Query: 810 YFTKATSLXPQVQLS 854
FTKAT+L +V+LS
Sbjct: 181 QFTKATALSDRVRLS 195
>UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=11;
Saccharomycetales|Rep: Proliferating cell nuclear
antigen - Saccharomyces cerevisiae (Baker's yeast)
Length = 258
Score = 181 bits (440), Expect = 2e-44
Identities = 85/225 (37%), Positives = 138/225 (61%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M EA+ +S+ K++++ KD + F C ++GI QA+D+S V LVSL + + F +Y
Sbjct: 1 MLEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVEAFQEY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCD +++GM+L S+SKIL+C + DT+T+ A + D++ +FE ++++++Y +KLM+
Sbjct: 61 RCDHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYSLKLMD 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
+D + L I E +Y T+ +PSSEF++I RDLSQ +S+ I TKE +KF A GDIGS +V
Sbjct: 121 IDADFLKIEELQYDSTLSLPSSEFSKIVRDLSQLSDSINIMITKETIKFVADGDIGSGSV 180
Query: 711 KLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQV 845
+ ++ LTF +YL K +SL +V
Sbjct: 181 IIKPFVDMEHPETSIKLEMDQPVDLTFGAKYLLDIIKGSSLSDRV 225
>UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 1 - Toxoplasma gondii
Length = 316
Score = 179 bits (435), Expect = 1e-43
Identities = 88/230 (38%), Positives = 139/230 (60%), Gaps = 2/230 (0%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M EA+L +S+L+++ E+IKD+++ DCD+ G++LQAMD+SHV+LV+L L GF +
Sbjct: 1 MLEAKLQHASVLRRLFESIKDMVSDVNLDCDETGLRLQAMDSSHVALVALKLDDAGFVHF 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCDR +G+NL S+ K+ K + D+ +I+ ++++D VTFVFE+ EK+S + ++LM
Sbjct: 61 RCDRERLLGLNLASVCKVFKLCSNADSCSIQNEEDSDTVTFVFENEADEKLSSFSLRLMA 120
Query: 531 LDLEHLGIP--ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSA 704
+D + L +P ET + T+ M + EFA + R + +F +S+ + K GVKF GD+G
Sbjct: 121 IDQDALRVPEDETAHDVTVTMSAREFANVVRIMGEFSDSVRVEVDKLGVKFVTQGDLGVG 180
Query: 705 NVKLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQLS 854
V L + T+A +YLNYF KA S+ V LS
Sbjct: 181 EVLLKPKPFANGDDSGVEIKVNSPVCQTYAVKYLNYFAKAASVSSSVTLS 230
>UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8;
Aconoidasida|Rep: Proliferating cell nuclear antigen -
Plasmodium falciparum (isolate 3D7)
Length = 274
Score = 177 bits (432), Expect = 2e-43
Identities = 88/229 (38%), Positives = 138/229 (60%), Gaps = 2/229 (0%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M EA+L +SILKK+ E IKDL+ A D D++G++LQA+D +HVSLVSL L GF Y
Sbjct: 1 MLEAKLNNASILKKLFECIKDLVNDANVDADESGLKLQALDGNHVSLVSLHLLDSGFSHY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCDR +G+N+ S++K+ K G ++V I ++D+ DN+ FVFE+ ++KV+++ +KLM+
Sbjct: 61 RCDRERVLGVNIASLNKVFKLCGANESVVISSKDDEDNLNFVFENNKEDKVTNFSLKLMS 120
Query: 531 LDLEHLGIPETE--YSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSA 704
++L+ L IP+ E + + + S E I R+LS+F +++ I +KF+ G +G A
Sbjct: 121 IELDSLNIPDCEEGFDAEVELSSKELTNIFRNLSEFSDTVFIEIDSNCIKFTTKGIVGDA 180
Query: 705 NVKLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
V L S + +FA +YLN F+K+ L V L
Sbjct: 181 EVALKPRDSTSEDDIGVTIKSKKKIKQSFAIKYLNLFSKSNILADVVVL 229
>UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2;
Cryptosporidium|Rep: Proliferating cell nuclear antigen
- Cryptosporidium hominis
Length = 261
Score = 167 bits (407), Expect = 2e-40
Identities = 92/233 (39%), Positives = 138/233 (59%), Gaps = 5/233 (2%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
MFEARL + + KK+ EA+K+L DCD +G+ LQAMD+SHV+LVSL ++ D F+ Y
Sbjct: 1 MFEARLQNAMLFKKIAEALKELCHDINIDCDSDGLHLQAMDSSHVALVSLNIQPDAFEHY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDT-VTIKA-QDNADN-VTFVFESPNQEKVSDYE-- 515
RCDR + +G+++ +SK +K DKDT +T+K DN DN +T FE N +S E
Sbjct: 61 RCDRPVVLGLDMQQLSKFMKFC-DKDTSMTLKKYDDNEDNRITMCFED-NSGILSSKECI 118
Query: 516 MKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDI 695
++LM+++ EH+ IPE EY C + MPS+ F I RD+S G+ + + + + +KF GD
Sbjct: 119 LRLMDIEQEHISIPEEEYECNVTMPSNLFQSIVRDMSGIGDEVSLEISGKYIKFCVDGDD 178
Query: 696 GSANVKLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQLS 854
G ++ S D + +A +YL+YFTKA+ L V +S
Sbjct: 179 GKIDLNFPLNDSPD-ITKAVQIHADDTISQKYALRYLSYFTKASPLSTTVNIS 230
>UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1;
Guillardia theta|Rep: Proliferating cell nuclear antigen
- Guillardia theta (Cryptomonas phi)
Length = 258
Score = 167 bits (405), Expect = 4e-40
Identities = 79/228 (34%), Positives = 142/228 (62%), Gaps = 1/228 (0%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M A+L +S+LKK+++A+KDL++ A + ++G+ LQAMD+SHVSLVSL + + F+ Y
Sbjct: 1 MLRAKLSSNSLLKKIVDAVKDLISDANIEFTNSGLSLQAMDSSHVSLVSLIIPPEEFEVY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
+C++ S+G+NL KILKCA ++D+V I ++N + +TF+F + E+ S+++++L+
Sbjct: 61 QCEKIQSLGINLNWFYKILKCATNEDSVEIIYKNNENFITFLFRNEANERSSEFQLRLLE 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
++ E LGIPET YS + + + E+ R+C ++ G+++ +S ++ +KF G++G ++
Sbjct: 121 INNETLGIPETIYSAVVTLTAVEYKRVCSEMLTIGDTVYLSISENTIKFEIEGEVGKGSI 180
Query: 711 KL-AQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
L + + + FA +YLN F KA L +V L
Sbjct: 181 SLKSHILEENSVEDNNKTSDMEIIKMGFALRYLNTFAKAVPLSDKVTL 228
>UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n=1;
Phaseolus coccineus|Rep: Proliferating cell nuclear
antigen 2 - Phaseolus coccineus (Scarlet runner bean)
Length = 271
Score = 159 bits (386), Expect = 8e-38
Identities = 94/243 (38%), Positives = 141/243 (58%), Gaps = 11/243 (4%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M E R ++ S+LKKV E IK+ + F C GI +QAM NS++S+++L L + GF+ Y
Sbjct: 1 MLEVRFVQGSLLKKVSEIIKEFIHDTNFYCSSTGIIVQAM-NSNLSILALVLHSSGFEHY 59
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCD N SMGMNL SM ++L A D +TIKA D D VTF FESP Q ++S++EM+L++
Sbjct: 60 RCDHNFSMGMNLYSMVELLNRANGDDIITIKADDGGDTVTFTFESPRQNQISNFEMRLVD 119
Query: 531 LDLEHLGIPE-----TEYSCTIRMPSSEFARICRDLSQ----FGESMVISCTKEGVKFSA 683
+D I E EY ++MPSS F ICR++S+ F +VI+ T++ VKFS
Sbjct: 120 IDSPRYWIREDEAKYMEYLAMVKMPSSIFDGICRNISRIDGMFDLDLVITVTQKYVKFST 179
Query: 684 TG--DIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQLSX 857
G ++GSA+V + A++ + Y++ F KAT+L V +
Sbjct: 180 QGNENLGSASVLNPEEATV---IDMFDVNKPVSMRIRNGGTYMSSFMKATTLSNTVSIIL 236
Query: 858 VSR 866
+++
Sbjct: 237 LNK 239
>UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n=1;
Babesia bovis|Rep: Proliferating cell nuclear antigen 1
- Babesia bovis
Length = 277
Score = 145 bits (351), Expect = 1e-33
Identities = 70/229 (30%), Positives = 128/229 (55%), Gaps = 2/229 (0%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M E +L + +L+++ + ++D+++ D D G+ LQA+D +HV+LV L L GF Y
Sbjct: 1 MLELKLNHAVVLRRIFDCMRDIISDGNIDFDATGMSLQALDGNHVALVHLKLHESGFSLY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
RCDR ++G+NL S++K K + D+V I++++ D ++F+FE+ ++V + +KLM+
Sbjct: 61 RCDRPRALGINLNSVTKAFKSCSNHDSVLIQSEEEKDYISFIFENNVDDRVMSFSLKLMS 120
Query: 531 LDLEHLGIPE-TE-YSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSA 704
++ + L IPE TE Y I + S E A IC+ +++F +++ + + V F+ GD+G
Sbjct: 121 IEQDALSIPENTEGYDAEITLGSKELANICKQMNEFSDTLKLDVSINSVSFATQGDLGFG 180
Query: 705 NVKLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
+ L ++ ++A +YL F K+ L V L
Sbjct: 181 EIVLKNRPPTNESDCGVSVKVRRPIKQSYATKYLLMFAKSCCLSDVVTL 229
>UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n=7;
Plasmodium|Rep: Proliferating cell nuclear antigen 2 -
Plasmodium falciparum
Length = 264
Score = 138 bits (333), Expect = 2e-31
Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 6/234 (2%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
MFE R+ KK+ E +KD+ T+ +CD+NGI++Q+MD SHVSLV L + +D F Y
Sbjct: 1 MFECRI-DGQFFKKLFETLKDICTEVNLECDENGIKMQSMDCSHVSLVDLNIVSDFFQHY 59
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTF---VFESPNQEKVSD---Y 512
RCD+N +G+++ M KIL +K TV + +DN ++ + + Q D
Sbjct: 60 RCDKNCVLGISINFMLKILSVIKEKSTVFLFKEDNENDAVLNIGIIDEEEQSSADDSLEI 119
Query: 513 EMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGD 692
++KL+N EHL IP++EY C M S +F + L+ G+++ IS K+ + S TG
Sbjct: 120 QVKLINAQKEHLEIPQSEYHCQCTMKSKKFQEFTKYLNSIGDNVSISMKKDAMILSTTG- 178
Query: 693 IGSANVKLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQLS 854
+++K+ T + FA +YL F++A+SL +V +S
Sbjct: 179 ---SDIKV--TKQFTNDMTDISITCTKSVSQEFATRYLVMFSRASSLSDEVLIS 227
>UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear
antigen; n=1; Emiliania huxleyi virus 86|Rep: Putative
proliferating cell nuclear antigen - Emiliania huxleyi
virus 86
Length = 259
Score = 137 bits (331), Expect = 4e-31
Identities = 62/180 (34%), Positives = 111/180 (61%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
MFE + + +L++V+E I +L+ + FDC +NG+ +QAMD++HV L ++ L DGF Y
Sbjct: 1 MFECKG-NAGLLRRVIECIAELIIECRFDCSENGMVVQAMDSTHVCLAAINLLRDGFLHY 59
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
C + + + + + KIL C+G DT T++ + + +FE+P ++++D+E+ L++
Sbjct: 60 DCSQPLVIDIPIDKFKKILACSGPDDTFTLRF-NGGSVLLIMFETPAHDRITDFELNLLD 118
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
++ + + +PE E I+M S + RI +D FG+ + IS TK+GV +S GD G N+
Sbjct: 119 IEQDAMSVPELEPHLHIQMNSIDLKRIVKDYQTFGDVITISGTKDGVTYSVNGDFGKGNI 178
>UniRef50_UPI000049949B Cluster: proliferating cell nuclear antigen;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: proliferating
cell nuclear antigen - Entamoeba histolytica HM-1:IMSS
Length = 262
Score = 135 bits (327), Expect = 1e-30
Identities = 75/228 (32%), Positives = 122/228 (53%), Gaps = 1/228 (0%)
Frame = +3
Query: 174 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 353
F A+ +++ K+V+E++K + + FDC D GI +Q MDNSHVSLVSL + D FD+++
Sbjct: 4 FHAKFKEAALFKRVVESLKSTIDKTNFDCSDAGIAVQCMDNSHVSLVSLLIETDAFDEFQ 63
Query: 354 CDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNL 533
C + I++G+NL +SKILK A D D I D+ S K + + L+++
Sbjct: 64 CLKPITLGINLTHLSKILK-ALDNDCGLILDVKKVDDAVLSITSEGTNKTMKFGLNLVDI 122
Query: 534 DLEHLGIPETEYSCTIRMPSSEFARICRDLSQFG-ESMVISCTKEGVKFSATGDIGSANV 710
+ E + IPE + I + S+EF +I +D S G +S+ I CTK V + G + +
Sbjct: 123 EAESVEIPELQSDAIITLSSAEFLKITKDFSALGDDSITIGCTKNEVTLTTKGAMCETCM 182
Query: 711 KLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQLS 854
L+ ++D T +FA + ++ F K+ L V+LS
Sbjct: 183 TLSALENVDS--NGLQIEHNKDVTASFALKQISEFAKSAPLADNVKLS 228
>UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3;
Piroplasmida|Rep: Proliferating cell nuclear antigen -
Babesia bovis
Length = 264
Score = 130 bits (314), Expect = 4e-29
Identities = 75/235 (31%), Positives = 126/235 (53%), Gaps = 7/235 (2%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
MFE RL L+++ EA++++ + DC ++G+ +QAMDNSH+SL+ L L D F Y
Sbjct: 1 MFECRL-DGMFLRRLFEALREICNDVSIDCSEDGLSMQAMDNSHISLIHLCLAPDFFQLY 59
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTI-KAQDNADNVTFV--FESPNQEKVS----D 509
RCD ++G+N+ M KIL +K + + + D+ D V FV E+ ++ +
Sbjct: 60 RCDTPCTLGLNISFMLKILAVVREKSVIYLARGDDSEDPVLFVRIIEAGGYDEAESDALE 119
Query: 510 YEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATG 689
++K+++++ EHL IP+ EY+C M S F + L G+++VIS K+ +K A G
Sbjct: 120 AQVKMIDVEREHLDIPDCEYTCKCVMNSRRFQEFAKYLHSIGDTVVISMNKDVIKLEAEG 179
Query: 690 DIGSANVKLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQLS 854
D +K ++T + FA +YL F+KAT+L V ++
Sbjct: 180 D----GIKASKT--FHDGVGDVRVMSTEPLSQMFATRYLVLFSKATALAQDVSIN 228
>UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 264
Score = 125 bits (301), Expect = 2e-27
Identities = 61/228 (26%), Positives = 124/228 (54%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
M E ++S KK+++++K L+ +F C +G+ LQAMD SHVSL+S++L AD F+ Y
Sbjct: 1 MVEIVFEQASFFKKIIDSLKGLVEDISFKCTSDGMDLQAMDISHVSLISISLPADIFNTY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
C +++ N+ ++K+LK A D + I + +++T + +++K + + +K ++
Sbjct: 61 NCSEEMNLAFNVDVLNKVLKSASTDDYLKISTEKPNEDITIQLSTQSEDKNTRFNLKPVD 120
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
++ + + IPE Y + + S+ F ++ R LS+ +S+ + CT+ + FS + + +A
Sbjct: 121 INGDAVSIPEHIYKAKLSLSSNAFNQLIRSLSEVNDSVAVRCTEGSISFSVSDILLNATT 180
Query: 711 KLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQLS 854
+ +K + +A +YL + A++L +V LS
Sbjct: 181 TFNAGVTNEKAEEEIEVDVTEGCKVAYALRYLKAISAASALSTRVNLS 228
>UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Orgyia pseudotsugata multicapsid
polyhedrosis virus (OpMNPV)
Length = 249
Score = 118 bits (285), Expect = 1e-25
Identities = 68/226 (30%), Positives = 118/226 (52%), Gaps = 1/226 (0%)
Frame = +3
Query: 177 EARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC 356
EA ++ + ++ A++ LLT ATFDCD +G++L ++D V+L L LR GF +Y C
Sbjct: 2 EATFATAAAFQSIVGALRGLLTHATFDCDAHGMRLHSLDVERVALADLRLRRAGFARYAC 61
Query: 357 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 536
+R +S + + + KI++ A +T++ D V +E+ + + ++LD
Sbjct: 62 ERKLSFSVPVRGLVKIVRTADPSAPLTMRVAARDDRVRLAYET--ARRAVSCTLAQISLD 119
Query: 537 LEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMV-ISCTKEGVKFSATGDIGSANVK 713
+ LG+P+ EY+C + +PS+E R C DL++ G + V +S G+ F+A D G V+
Sbjct: 120 ADRLGVPDKEYTCVLAVPSAELTRACADLARLGATTVEMSSGTTGLSFAAHADDG-VRVR 178
Query: 714 LAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
+ S + T FAC YLN +A++L V +
Sbjct: 179 VLLRGSPQR-----------PLTQAFACCYLNKLARASALSETVDV 213
>UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 1 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 262
Score = 109 bits (261), Expect = 1e-22
Identities = 59/229 (25%), Positives = 116/229 (50%), Gaps = 2/229 (0%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
+F R L+ +++K + + +K++L GI++ A+D + VSLV L L ++ F++Y
Sbjct: 7 LFHIRTLQGNVIKSLFDCLKEILHDVMLSFGPTGIRISALDGAKVSLVHLKLDSESFEEY 66
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN-VTFVFESPNQEKVSDYEMKLM 527
+C+ +G+N+ +M K+L+ AG D++ + N + + ++ + ++ + MKL+
Sbjct: 67 KCEHTYELGVNVLNMFKLLRSAGSHDSILFRYLKNDPHMIELTIQNFEKNSLTKFNMKLI 126
Query: 528 NLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSAN 707
+D + + + E+ I MP++ F RICRD+S + +VI K+G + S D
Sbjct: 127 EIDSVEIEVGDIEFDTIIVMPANYFQRICRDMSDITDHLVI--VKKGDEVSFNSDYTCVT 184
Query: 708 VKLAQTASI-DKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
+Q I D F+ +YL F KA+ + V++
Sbjct: 185 DFASQKTIIGDSDNGQITCNNDTDYESKFSLKYLTSFCKASGMSSAVEI 233
>UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1;
Bigelowiella natans|Rep: Proliferating cell nuclear
antigen - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 258
Score = 103 bits (248), Expect = 4e-21
Identities = 58/214 (27%), Positives = 115/214 (53%)
Frame = +3
Query: 210 KVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLG 389
K+ E++KDLL+++TF+ +N + +Q++D+SH++L+ + ++AD F+ ++ +N
Sbjct: 14 KLFESMKDLLSESTFEFKENFLTIQSIDHSHITLLEVDIQADYFENFKEFVGTKFKINFQ 73
Query: 390 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEY 569
+ K LK + ++D+V +K + + + VFE+ ++++YE+ L E + +P +Y
Sbjct: 74 GLIKALKTSTNEDSVMMKYDETTNFFSLVFEN-KDSRIAEYELNLFKSIKEKITVPVDKY 132
Query: 570 SCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXX 749
TI M S E ++ +DL G+ +VI+ V F+A G G A + T ++ K
Sbjct: 133 DATISMNSLELTKLAKDLINVGDIVVINIHPGVVVFTAKGTSGRAIIIYKNTNNLTK--R 190
Query: 750 XXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
T + + +Y+ +F+K L V L
Sbjct: 191 KVTVNCQNQITQSISLKYIIHFSKLALLSENVTL 224
>UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;
n=3; Chlorovirus|Rep: Putative uncharacterized protein
Z788R - Chlorella virus ATCV-1
Length = 292
Score = 100 bits (240), Expect = 4e-20
Identities = 56/229 (24%), Positives = 118/229 (51%), Gaps = 2/229 (0%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
+F R ++ S++K + + +K++L + +G+++ AMD + VSLV + L A+ F++Y
Sbjct: 36 LFCIRTVQGSVIKSLFDTLKEILHDVSITFSPSGVKISAMDGAKVSLVHMKLDAEAFEEY 95
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIK-AQDNADNVTFVFESPNQEKVSDYEMKLM 527
C+ +G+N+ ++ K+L+ G +D++ + + N + ++ + + + +KL+
Sbjct: 96 VCNNTYEIGVNVTNLFKLLRTTGSRDSIMFRYLKSNPHVLEITIQNFEKNSTTQFFLKLI 155
Query: 528 NLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSAN 707
+D + I + E+ I +PS+ F R+CRD+S+ + I K+G + S D S
Sbjct: 156 EIDSACIDINDLEFDAIISIPSNYFQRLCRDMSELTNFLWIE-KKDG-QVSFCSDYTSVT 213
Query: 708 VKLAQTASI-DKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
+Q + D + F+ +YL F+KA+ L V++
Sbjct: 214 DFASQRTILGDSDMGKIITVEEASYSNKFSLKYLTSFSKASGLSSVVEM 262
>UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n=2;
Thermoprotei|Rep: DNA polymerase sliding clamp subunit -
Cenarchaeum symbiosum
Length = 248
Score = 99.5 bits (237), Expect = 1e-19
Identities = 52/179 (29%), Positives = 92/179 (51%)
Frame = +3
Query: 174 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 353
F A+ S LK ++ AI L+ +ATF GI + MD SHV+L+ ++ F+KY
Sbjct: 3 FSAKTSGSDDLKAIISAISTLVEEATFVATAEGITFRGMDPSHVALIDISWPNSAFEKYE 62
Query: 354 CDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNL 533
CD NI G+ + +K++K A KD++TI + D++ + N++ Y+++L+
Sbjct: 63 CDSNIKFGVRIDEFTKLIKRADKKDSITISV--SKDSMLLIDIGSNKK----YKIRLIES 116
Query: 534 DLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
+P+ Y I + ++ F +I D+ + + I GV+F+ GD G A +
Sbjct: 117 SATDTPLPKISYDAKIELATTSFEKILGDVQVVSDYLTIKAKPTGVEFAGKGDSGEAAI 175
>UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 2 - Toxoplasma gondii
Length = 272
Score = 92.3 bits (219), Expect = 1e-17
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 9/220 (4%)
Frame = +3
Query: 219 EAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMS 398
E +K+++T C+ +GI L +MD SHV++V + L D F KYRCDR + +G+++ ++
Sbjct: 1 ECLKEMVTDVNLVCNASGISLDSMDGSHVAVVDVRLAVDLFHKYRCDRPVQLGLSVPNLL 60
Query: 399 KILKCAGDKDTVTIKA-------QDNADNVTFV-FESPNQEKVSDYEMKLMNLDLEHLGI 554
L+ +T+ + D D + + E P E++L++++ E L +
Sbjct: 61 LALQPVKSAETLVHLSSLHGDDEDDEEDTILHINIEDPESGDTWSMEVRLLDVESEQLEV 120
Query: 555 PE-TEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTAS 731
PE TE+ T + S E + R L+ ES+V+ K ++ SA GD +A+ K+ Q S
Sbjct: 121 PEHTEHEATAVVRSKELQDLVRYLNSLSESIVVKMDKTHMQLSARGDSVAASRKM-QPES 179
Query: 732 IDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
+ FA +YLN F K L V++
Sbjct: 180 L---------VCTNSTEHEFAARYLNMFLKGAVLADFVEI 210
>UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1;
Encephalitozoon cuniculi|Rep: Proliferating cell nuclear
antigen - Encephalitozoon cuniculi
Length = 267
Score = 91.5 bits (217), Expect = 3e-17
Identities = 49/218 (22%), Positives = 105/218 (48%)
Frame = +3
Query: 198 SILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMG 377
S++K++LE++ +++ A + G+ +Q MD +HV+ + L + F KYRCDR + +G
Sbjct: 22 SLMKRILESLSEIVETADIKATEKGLSIQVMDVTHVAFADIFLSSTMFTKYRCDRELVIG 81
Query: 378 MNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 557
+ L ++ KI+K + T + + + + + V +++KL D E IP
Sbjct: 82 VQLKTLIKIIKGMSVEGGGTFRMECDDATTNLNIRNTREGNVLSFKLKLFTSDSEAYNIP 141
Query: 558 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASID 737
E ++ + +P+ EF + + + FG+ + + + + F TG+ A++ + + +
Sbjct: 142 EFDFDASATIPADEFMYVPKLVGTFGDVVGVQAEGKTLMFFQTGEHADASMSFEECPARE 201
Query: 738 KXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
+ T A +Y+N K L +V++
Sbjct: 202 E----LKIEANTLITQEIAMKYVNLIGKVVPLCKEVKI 235
>UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1;
Giardia lamblia ATCC 50803|Rep: Proliferating cell
nuclear antigen - Giardia lamblia ATCC 50803
Length = 299
Score = 90.2 bits (214), Expect = 6e-17
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Frame = +3
Query: 174 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 353
FE + LKK+ E + L+ D+G+ ++ +DN ++L+SL L F +R
Sbjct: 8 FELTFRDAGTLKKIFETLVPLVKDTPVSITDHGLSIETIDNGRIALISLHLPTQFFKNFR 67
Query: 354 CDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN-ADNVTFVFESPNQEKVSDYEMKLMN 530
C+R S+G+ S K++K + D VT+ + N +D + + ES + ++ ++L
Sbjct: 68 CERACSLGVRTASFLKVIKFCSNDDLVTLSQRSNSSDQLDILVESRKYSQTMNFSLRLFR 127
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGES 641
D + + + E+ T+ + S FA + RDL G++
Sbjct: 128 SDADQIDVIRPEFDSTVSIDSGRFAGMVRDLMGIGKT 164
>UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3;
Methanobacteriaceae|Rep: DNA polymerase sliding clamp -
Methanobacterium thermoautotrophicum
Length = 244
Score = 86.2 bits (204), Expect = 1e-15
Identities = 51/190 (26%), Positives = 91/190 (47%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
MF+A L +IL+ +AI ++ + G++L A+D SH++ V L L+A+ FD+Y
Sbjct: 1 MFKAELNDPNILRTSFDAISSIVDEVQIQLSAEGLRLDALDRSHITYVHLELKAELFDEY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
CD + ++ + K+LK A D V + + N+ FE E V ++++L++
Sbjct: 61 VCDEPERINVDTEELMKVLKRAKANDRVILSTDEG--NLIIQFEG---EAVRTFKIRLID 115
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
++ E PE EY +P D+ F + + ++ SA G+ G A +
Sbjct: 116 IEYETPSPPEIEYENEFEVPFQLLKDSIADIDIFSDKITFRVDEDRFIASAEGEFGDAQI 175
Query: 711 KLAQTASIDK 740
+ IDK
Sbjct: 176 EYLHGERIDK 185
>UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PCNA
- Chrysodeixis chalcites nucleopolyhedrovirus
Length = 263
Score = 83.8 bits (198), Expect = 5e-15
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
MFEA+ KK +E I+ ++ ++ + GI +Q D S +S + LT+ + F +
Sbjct: 1 MFEAKFKNPIAFKKAMEVIETVVEFSSLEVTSEGISMQCSDTSRISFIKLTMMKEAFKSF 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
+N+S+ + + + KILK D +TI + +N + F+ + + YE KL +
Sbjct: 61 TFTKNLSLSVKMSGLCKILKTCTDASVLTIWSGENDSHDYLNFKIKTGKSLKSYEYKLYH 120
Query: 531 LDLEHLGIP-ETEYSCTIRMPSSEFARICRDLSQFGESMV-ISCTKEGVKFSATGD 692
D + G+ + + + M S E R+CR L G V I + + F++ GD
Sbjct: 121 FDSQDYGMSNDLQVTGRAMMHSVELKRLCRHLDLLGNLNVGIKIDLDKIIFNSKGD 176
>UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 2 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 264
Score = 83.8 bits (198), Expect = 5e-15
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 1/228 (0%)
Frame = +3
Query: 165 INMFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFD 344
+ MF + +KK+ DL+ A + G+ +Q+MD SHVSLV+L + F
Sbjct: 13 LQMFTIVSDAAETIKKLFVVFNDLVDIANLSFTNEGLSVQSMDTSHVSLVNLKIGKSYFK 72
Query: 345 KYRCDRNISMGMNLGSMSKILKCAGDKDTVTIK-AQDNADNVTFVFESPNQEKVSDYEMK 521
Y + ++G+ + + +IL C G+ D +TI DN D + + + SD++MK
Sbjct: 73 DYSIAQEATVGIKISNFVRILDCVGN-DEITISFTYDNPDELIV------KSEYSDFKMK 125
Query: 522 LMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGS 701
++++ E + IPE + I S+ + ++++ FG+++ I + V G+IG
Sbjct: 126 TIDIETEEMEIPEMDIDVLIDADSNIIQKYLKNMAGFGDTVKIYTQDDVVHMKTAGEIGE 185
Query: 702 ANVKLAQTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQV 845
++++ K T FA +YL F KA + +V
Sbjct: 186 VDLQIHDQRVEIK----------GRLTCEFATRYLMTFAKAAGISKRV 223
>UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8;
cellular organisms|Rep: DNA polymerase sliding clamp -
Methanococcus maripaludis
Length = 250
Score = 75.8 bits (178), Expect = 1e-12
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Frame = +3
Query: 207 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 386
KKV+ A +L+ + F+ D+NGI+ AMD SHV+LVS+ + D F++Y D +G++L
Sbjct: 12 KKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKDVFEEYEGDIQ-DIGIDL 70
Query: 387 GSMSKIL-KCAGDKDTV-TIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPE 560
++ KI+ + GD+ + + + N N+TF + ++ Y++ NL +P+
Sbjct: 71 EALKKIIARGRGDEKLILDLDVEKNKLNITFKSNVTRKFSIALYDVSSSNLK-----VPD 125
Query: 561 TEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDK 740
EY ++ + + F +D + + + + + GD+ + + D
Sbjct: 126 IEYPNSVSIKAGAFVEALKDAELVNDHITLKIDENKFVIYSKGDLNQSETVFDNSIDDDD 185
Query: 741 XXXXXXXXXXXXXTLTFACQYLNYFTKATS 830
+ TF YL TK+T+
Sbjct: 186 NALADFNMGEASRS-TFNLAYLKDLTKSTA 214
>UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein Z530L - Chlorella virus ATCV-1
Length = 261
Score = 74.5 bits (175), Expect = 3e-12
Identities = 56/217 (25%), Positives = 102/217 (47%)
Frame = +3
Query: 201 ILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGM 380
I++K L + +L + G+++ AMD HVSL ++ FD Y + +G+
Sbjct: 25 IMRKALALLSELSDDVNITFAEQGMKIVAMDTGHVSLTAVKFAKGMFDVYSLGKETVIGV 84
Query: 381 NLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPE 560
+ ++ K+L C D T + ++ D F + + +++M L++LD E + IP
Sbjct: 85 KVSNLVKVLSCV-DGPTSFVYDEETPD--FFNISTTH----GNFKMGLIDLDSEEMLIPH 137
Query: 561 TEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDK 740
++ I SS F + ++LS FG ++ I E V S++GDIG+ + +L +
Sbjct: 138 MDFEVEIDADSSVFQKHVKNLSMFGGALRIQADDE-VWMSSSGDIGTGSFRLEGS----- 191
Query: 741 XXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
TF+ +Y+N F KA ++ V L
Sbjct: 192 -----RVKVSGPLDSTFSLKYINTFCKAANVSKTVAL 223
>UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp B2 - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 246
Score = 74.5 bits (175), Expect = 3e-12
Identities = 40/171 (23%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Frame = +3
Query: 201 ILKKVLEAIKDLLTQATFDCD-DNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMG 377
I + ++ AI ++ + F D + G +AMD SHV ++++ D F+ + D + +G
Sbjct: 10 IWRYIVSAISKVIEEGVFVVDPEEGFLFRAMDPSHVIMLNMRFPRDSFEVFEVDSKVELG 69
Query: 378 MNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 557
+N ++K+L+ A +D + I + N V+F F K + + L+++ E L P
Sbjct: 70 VNFEDVAKVLRRASKEDKLEITSDGN--TVSFAFIGKGYRK---FTLPLLDITAEELPEP 124
Query: 558 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 710
+ E+ +++ S + +D+ G+ + +++ K ++ DIG A +
Sbjct: 125 QLEFKAIVKVMSDVYRDAIKDVELIGDVIRFIASQDEFKVVSSSDIGEAEI 175
>UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;
n=2; Paramecium bursaria Chlorella virus A1|Rep:
Putative uncharacterized protein M697L - Chlorella virus
MT325
Length = 276
Score = 73.7 bits (173), Expect = 5e-12
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 2/232 (0%)
Frame = +3
Query: 162 NINM-FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADG 338
N+N+ F+ + +KK+ + +L ++G+++Q MD SHV+L ++ +
Sbjct: 27 NMNLGFKVSCQDTDAVKKIFALLDELNDDVNLMFTEHGLKIQTMDTSHVALSTVKISKGF 86
Query: 339 FDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEM 518
F +Y + ++G+ + +M ++L C D ++D DN+ + S Q ++ +
Sbjct: 87 FTEYVVPQFTTIGIKISTMIRVLGCI-DGGFSFEYSEDTPDNL--IVRSDTQ----NFML 139
Query: 519 KLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIG 698
++LD E + P+ EY I SS + ++L+ FG+S+ ++ V +GD+G
Sbjct: 140 NTIDLDSEEMEAPDAEYDVEIDADSSVIQKYFKNLALFGDSVSVTSEGNDVFLGTSGDLG 199
Query: 699 SANVKLA-QTASIDKXXXXXXXXXXXXXTLTFACQYLNYFTKATSLXPQVQL 851
+ K+A Q I+ F+ +YL F KA SL QL
Sbjct: 200 KVSFKVAGQRVKIN-----------GTLNAKFSSRYLVTFAKAASLSKTSQL 240
>UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1;
Caldivirga maquilingensis IC-167|Rep: DNA polymerase
sliding clamp - Caldivirga maquilingensis IC-167
Length = 297
Score = 67.7 bits (158), Expect = 4e-10
Identities = 35/168 (20%), Positives = 88/168 (52%), Gaps = 1/168 (0%)
Frame = +3
Query: 213 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY-RCDRNISMGMNLG 389
+++A+ L+ ++ +G++L+A+D S ++V L + FD+Y +++I++G+N
Sbjct: 64 IMDAVAVLVEESALTVTKDGVKLRALDPSRTAMVDLYMPRTAFDEYPDVEQDINIGVNFS 123
Query: 390 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEY 569
+ KIL+ AG +VT + ++N+ + + + ++ L+++ +E L P+ +
Sbjct: 124 EVKKILQRAGKGSSVTFEVEENSLKIRM-----SGKVTRTIKLPLIDIPVEQLPTPKVIF 178
Query: 570 SCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVK 713
+ T ++ S + +D+ ++ ++G+ A+ D G +K
Sbjct: 179 TVTAKLASDALRQAVKDVEVIADAAKFEGKEDGLYIRASSDRGETEIK 226
>UniRef50_UPI00015BB110 Cluster: proliferating cell nuclear antigen
PcnA; n=1; Ignicoccus hospitalis KIN4/I|Rep:
proliferating cell nuclear antigen PcnA - Ignicoccus
hospitalis KIN4/I
Length = 245
Score = 67.3 bits (157), Expect = 5e-10
Identities = 31/178 (17%), Positives = 91/178 (51%)
Frame = +3
Query: 201 ILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGM 380
+ K V+ + ++ + ++ G +++ MD S V L+ + + F+ + + ++S G+
Sbjct: 10 VWKYVISGVSKVVKETVAHVNEEGFRIKTMDESKVVLIDFMIPSSSFEVFEVESDVSFGI 69
Query: 381 NLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPE 560
N+ ++K+++ A +D ++I+ +N+ ++ +FE K + ++++ +L + +
Sbjct: 70 NMEDLAKVMRRATKEDKLSIEVGENSYSI--IFEGHGLRKFTLPQLEVYEEELPEVDL-- 125
Query: 561 TEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASI 734
E + + S + + +DL +++ + ++ AT D+G A V +++ + +
Sbjct: 126 -ELPARVEITSDSYRELVKDLEPIADTVTFNLEPGTLRVEATSDLGYAEVIISEDSGV 182
>UniRef50_Q8QNE7 Cluster: EsV-1-132; n=2; Phaeovirus|Rep: EsV-1-132
- Ectocarpus siliculosus virus 1
Length = 301
Score = 67.3 bits (157), Expect = 5e-10
Identities = 37/177 (20%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Frame = +3
Query: 207 KKVLEAIKDLLTQATFD-CDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMN 383
K ++E +K+LL + D + GI+L ++D V+++ L + + + + ++ G+N
Sbjct: 62 KSLIECLKELLCEVNMDFIEGKGIRLVSIDPGRVAMIHLVV--NNIESFYAKGTVTAGLN 119
Query: 384 LGSMSKILKCAGDKDTVTIKA-QDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPE 560
+ + K+++ D + + +D + + + + +KL++LD E + IP+
Sbjct: 120 VVVLYKMIRSMTSNDFMEWRIYEDEPHQMEIELSNSERRTKTVTSIKLLDLDAEDIIIPQ 179
Query: 561 TEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTAS 731
E+ + MPSSE ++ R++ + I T+ ++ + G++ +++ + TAS
Sbjct: 180 VEFDRVVSMPSSELSKHVREMVTVSPFISIRATRTTLELVSEGEMAKSHITIEPTAS 236
>UniRef50_O29912 Cluster: DNA polymerase sliding clamp; n=1;
Archaeoglobus fulgidus|Rep: DNA polymerase sliding clamp
- Archaeoglobus fulgidus
Length = 245
Score = 66.1 bits (154), Expect = 1e-09
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 4/188 (2%)
Frame = +3
Query: 186 LLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRN 365
++ +LK V AI L+++A + G+ +A+D ++V++V + + D F+ Y D
Sbjct: 5 IMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVDPANVAMVIVDIPKDSFEVYNIDEE 64
Query: 366 ISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEH 545
++G+++ + I K KD V + +D ES + K E K+ +D
Sbjct: 65 KTIGVDMDRIFDISKSISTKDLVELIVED---------ESTLKVKFGSVEYKVALIDPSA 115
Query: 546 LG----IPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVK 713
+ IPE E I M + EF + + + ++ KEG + A GD+ S
Sbjct: 116 IRKEPRIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEGFRIEAKGDVDSIVFH 175
Query: 714 LAQTASID 737
+ +T I+
Sbjct: 176 MTETELIE 183
>UniRef50_Q7T6Y0 Cluster: Probable DNA polymerase sliding clamp;
n=1; Acanthamoeba polyphaga mimivirus|Rep: Probable DNA
polymerase sliding clamp - Mimivirus
Length = 464
Score = 62.9 bits (146), Expect = 1e-08
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Frame = +3
Query: 270 GIQLQAMDNSHVSLVSLTLRADGFDKYRCDR-NISMGMNLGSMSKILKCAGDKDTVTIKA 446
GI++ + + +LV + L A F+ +RCD I++G+++ ++ LK D D + I
Sbjct: 242 GIRIIRLTEDNNTLVKVVLEAANFEYFRCDEPKITVGVDMHTLHSHLKMINDDDPIVIYM 301
Query: 447 QDNADNVTFVFE-SPNQEKVSDYEMKLMNLDL--EHLGIPETEYSCTIRMPSSEFARICR 617
+ + ++ S N + + E++L +D+ + +P+TE+ I M S +F IC+
Sbjct: 302 KKDIQGSLYIRSLSENNDNSEEREIELFLMDIINPEIPVPKTEFQNRITMKSDKFHLICK 361
Query: 618 DLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQT 725
LSQ + I+ + F + G + T
Sbjct: 362 HLSQNSTFVEITSINNEILFKGQSEGGKVTMTYKDT 397
>UniRef50_A4YIY6 Cluster: DNA polymerase sliding clamp; n=1;
Metallosphaera sedula DSM 5348|Rep: DNA polymerase
sliding clamp - Metallosphaera sedula DSM 5348
Length = 245
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/156 (19%), Positives = 80/156 (51%)
Frame = +3
Query: 207 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 386
K V+EA+ L+ + TF +G+ + A+D +H+SL+ L + F+++ + G N
Sbjct: 12 KTVIEALSKLIDEVTFTFTSSGLDVVAVDRAHISLIKLHFPKEAFEEFDVEDQFRFGFNT 71
Query: 387 GSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETE 566
M K++ A K+ + +++++ ++ V + P +E + ++ + + ++ L + +
Sbjct: 72 QYMLKVMASAKRKEKIEMESREESEIVIRMLGEPPRE----FTIRNIEVPIQELPELKLD 127
Query: 567 YSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 674
+ ++ S F + +++ +S+ I T+ +K
Sbjct: 128 FDVKAKITSGGFKKAVSEIATVSDSVEIDATEMEIK 163
>UniRef50_P38252 Cluster: Putative uncharacterized protein YBR089W;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YBR089W - Saccharomyces
cerevisiae (Baker's yeast)
Length = 199
Score = 61.3 bits (142), Expect = 3e-08
Identities = 59/182 (32%), Positives = 76/182 (41%)
Frame = -2
Query: 712 LTFAEPMSPVAENFTPSFVHEITIDSPNCERSRQILANSELGMRIVQLYSVSGIPKCXXX 533
+T +P+SP A NF S V I I+S N ++SR IL NSE G V+ Y S I K
Sbjct: 15 MTEPDPISPSATNFIVSLVIMILIESLNWDKSRTILENSEDGNDRVESYCNSSIFKKSAS 74
Query: 532 XXXXXXXXXXXXXXFGLSKTNVTLSALSCAFIVTVSLSPAHLRIFDMLPRFMPIEMFLSQ 353
S + S + A V VS+ RI R +P S
Sbjct: 75 ISINFREYSAIRSFLVSSNNKMMESGVLSAISVNVSVLLPQRRILLSEVRSIPNVTGWSH 134
Query: 352 RYLSKPSARRVSDTRDT*ELSIACN*IPLSSQSKVACVSRSLIASSTFFKIELRSKRASN 173
Y K S +T T E S AC IP S K+ ++SL S K + S ASN
Sbjct: 135 LYSWKASTPISKETNRTLESSTACAMIPSSLHWKLTNWTQSLKPSIILLKRDASSNFASN 194
Query: 172 MF 167
+F
Sbjct: 195 IF 196
>UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7;
Thermococcaceae|Rep: DNA polymerase sliding clamp -
Pyrococcus furiosus
Length = 249
Score = 60.9 bits (141), Expect = 4e-08
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Frame = +3
Query: 210 KVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLG 389
++++ L+ +A F ++GI ++AMD S V L+ L L + F KY ++G+N+
Sbjct: 15 QLIDTASKLIDEAAFKVTEDGISMRAMDPSRVVLIDLNLPSSIFSKYEVVEPETIGVNMD 74
Query: 390 SMSKILKCAGDKDTVTI-KAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETE 566
+ KILK KDT+ + K ++N +T + +V +++ M +DL PE
Sbjct: 75 HLKKILKRGKAKDTLILKKGEENFLEITIQGTATRTFRVPLIDVEEMEVDL-----PELP 129
Query: 567 YSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKL 716
++ + + +D S +S+ + A G+ +KL
Sbjct: 130 FTAKVVVLGEVLKDAVKDASLVSDSIKFIARENEFIMKAEGETQEVEIKL 179
>UniRef50_Q8ZTY0 Cluster: DNA polymerase sliding clamp A; n=4;
Pyrobaculum|Rep: DNA polymerase sliding clamp A -
Pyrobaculum aerophilum
Length = 249
Score = 60.9 bits (141), Expect = 4e-08
Identities = 35/174 (20%), Positives = 82/174 (47%)
Frame = +3
Query: 213 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGS 392
++++I L+ +A F ++G+ L+A+D S ++V L + + F+++ + G+N
Sbjct: 17 IIDSISVLVEEANFLIRNDGLYLRALDVSRTAMVDLAIPKESFEEFPEVEELRFGLNFKE 76
Query: 393 MSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYS 572
+ K+L+ D ++++ ++ + + +S V E+ E L P+ Y+
Sbjct: 77 LKKLLRRVKKGDKISMEFEEGRVRIKLIGKSVRSIVVPSIEVV-----GEELPTPKVVYT 131
Query: 573 CTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASI 734
++ S A +D + + ++E + SA+ D G VKL + + +
Sbjct: 132 AMVKAASDVLATAVKDADAVADEVKFEASEEALIISASSDKGEVEVKLDKNSEL 185
>UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1;
Staphylothermus marinus F1|Rep: DNA polymerase sliding
clamp - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 248
Score = 59.3 bits (137), Expect = 1e-07
Identities = 38/170 (22%), Positives = 84/170 (49%), Gaps = 2/170 (1%)
Frame = +3
Query: 216 LEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSM 395
+ AI ++ + + +NGI+L+A+D S + +V + +G +Y D+ ++G+N+ +
Sbjct: 15 MNAIGKIIDEGAYKIQENGIRLRAIDPSRIVMVDFYIPREGLLEYEFDKEETIGVNMEDL 74
Query: 396 SKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSC 575
+KIL+ A D + ++ + A + +F ++ + +L L IP ++
Sbjct: 75 TKILRRAVKGDELELRTLE-AGRLAVIFLGRGTRMFIIPSLETIAEELPELKIP---FTV 130
Query: 576 TIRMPSSEFARICRDLSQFGESMVISCTKEGVKF--SATGDIGSANVKLA 719
+M S F + ++L +++ K+ K A+GDI A ++L+
Sbjct: 131 KAKMLPSTFRDVVKELEPISDAIEFRAIKDEQKIIAKASGDIVEAEIELS 180
>UniRef50_A1RXU8 Cluster: DNA polymerase sliding clamp; n=1;
Thermofilum pendens Hrk 5|Rep: DNA polymerase sliding
clamp - Thermofilum pendens (strain Hrk 5)
Length = 247
Score = 59.3 bits (137), Expect = 1e-07
Identities = 38/177 (21%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Frame = +3
Query: 207 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 386
K ++E++ ++ +A F G++L+A+D +++V L + ++ F++Y D+ + L
Sbjct: 13 KYIIESLATIVDEANFVASPEGLKLRALDPGRIAMVDLFIPSNLFEEYSVDQETKISAVL 72
Query: 387 GSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETE 566
+ K+LK A D ++ + +T S E+ ++ L+++ + L P+
Sbjct: 73 DDIDKVLKRAKSDDKISFEVSQGRLIITL---SGRAER--RFKFPLIDIAGQELPSPKLN 127
Query: 567 YSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLA-QTASI 734
++ +M S F +D S ES+ + E + A D G + + +T S+
Sbjct: 128 FTVAAKMLSDTFRDALKDASLVSESVKLKAEDESLWLLARSDKGEIESRFSIETGSL 184
>UniRef50_Q9YEZ5 Cluster: DNA polymerase sliding clamp B2; n=1;
Aeropyrum pernix|Rep: DNA polymerase sliding clamp B2 -
Aeropyrum pernix
Length = 249
Score = 56.4 bits (130), Expect = 9e-07
Identities = 33/172 (19%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 213 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC-DRNISMGMNLG 389
++ +I+ ++ + F G+ L+A+D SHV++V L F +Y ++ G++
Sbjct: 17 MVASIEKIIEEGVFVATGEGLSLRALDTSHVAMVDLYYPNTAFIEYDIGGESVEFGVSFD 76
Query: 390 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEY 569
+SK+L+ A +D + ++ + + +S + + + + + E L P+ +
Sbjct: 77 LLSKVLRRARKEDELVLEVE--GSRLAVKLKSRGER---TFRIPQVVMTYEKLPEPKVSF 131
Query: 570 SCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQT 725
+ RM S F RDL E++ + ++ + + ++ + ++L+Q+
Sbjct: 132 TVRARMLGSTFREAVRDLEPHSETLTLRALEDALLLVGSSEMATVEIELSQS 183
>UniRef50_Q4JAI6 Cluster: DNA polymerase sliding clamp 1; n=6;
Sulfolobaceae|Rep: DNA polymerase sliding clamp 1 -
Sulfolobus acidocaldarius
Length = 247
Score = 56.4 bits (130), Expect = 9e-07
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Frame = +3
Query: 204 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMN 383
LK ++E + + + F+ +GI+L A+D +HVSL+++ L + F +Y + G N
Sbjct: 11 LKNIVETLTKFIDEGLFEIGQDGIRLVAVDKAHVSLINIELYKELFKEYEVEDEFKFGFN 70
Query: 384 LGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPET 563
++KIL A K+ ++I++ D+ + V + + N+ + +PE
Sbjct: 71 SQYLAKILSIAKRKEEISIES-DSPERVKITLGG-----ALNRVFIINNIQVSPPEVPEV 124
Query: 564 --EYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGS 701
E+ + S F ++S +++ I ++ V G GS
Sbjct: 125 NLEFEVKASLSSKAFKTTINEISAVTDTVDIIAVEDKVILKGEGKEGS 172
>UniRef50_Q5UQH4 Cluster: Uncharacterized protein L823; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L823 - Mimivirus
Length = 323
Score = 54.4 bits (125), Expect = 4e-06
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Frame = +3
Query: 168 NMFEARLLRSSILKKVLEAIKDLLTQATF---DCDDNG--IQLQAMDNSHVSLVSLTLRA 332
N+ E + +LKK+L I ++ ++ F + ++ G I + DN + L+ L L+
Sbjct: 68 NILEIVTTKIDVLKKILRLIGEVTSECQFSFQNVNEGGRIIVTELHDNKTI-LLKLVLKG 126
Query: 333 DGFDKYRCDRN-ISMGMNLGSMSKILKCAGDKDTVT----IKAQDNADNVTFVFESPNQE 497
GFD Y+C ++ I+ + L + + L G DT T I + + + F+ N
Sbjct: 127 TGFDFYKCSKSKITARLYLPDIDEALGLIGVDDTNTNPIIISMKKDKETSIFITRIDNSG 186
Query: 498 KVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKF 677
E+ ++ +P+T + I + + +F +IC + + + IS T + V F
Sbjct: 187 FTEQVELPCRESVGLNIPLPKTTFQGKIVINAEKFRKICERICSVSDLIKISLTDKEVSF 246
Query: 678 SA 683
SA
Sbjct: 247 SA 248
>UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa
californica nucleopolyhedrovirus|Rep: 20.6 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 187
Score = 54.0 bits (124), Expect = 5e-06
Identities = 32/64 (50%), Positives = 37/64 (57%)
Frame = -2
Query: 358 SQRYLSKPSARRVSDTRDT*ELSIACN*IPLSSQSKVACVSRSLIASSTFFKIELRSKRA 179
S Y KPSA +DT T E+SI C P SQSKVAC SRSL S++ FK A
Sbjct: 10 SHLYFLKPSACSCNDTSATCEVSITCMLTPRLSQSKVACGSRSLKVSTSLFKTAPVLNSA 69
Query: 178 SNMF 167
SN+F
Sbjct: 70 SNIF 73
>UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp subunit - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 248
Score = 53.6 bits (123), Expect = 6e-06
Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Frame = +3
Query: 213 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGS 392
+L+AI ++ + NG++ A+D +HV+L+ + L + F +Y + + +G N+ +
Sbjct: 17 MLDAISKIVDELAMTITPNGVKAIALDPAHVALMVMELPPESFIEYEVEDEVKLGFNVAN 76
Query: 393 MSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPET--E 566
++KI+K D + I+ + D VT+ ++ +L+NLD+ +PE E
Sbjct: 77 IAKIIKRGKKGDKLDIEVDE--DRVTWSIVGATIKR-----YRLLNLDVPVPELPEAELE 129
Query: 567 YSCTIRMPSSEFARICRDLSQFGESM 644
+ + + F +D G+++
Sbjct: 130 FKVHVSLIVDPFKNALKDAEAVGDTV 155
>UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1;
Methanopyrus kandleri|Rep: DNA polymerase sliding clamp
- Methanopyrus kandleri
Length = 253
Score = 51.6 bits (118), Expect = 3e-05
Identities = 39/187 (20%), Positives = 85/187 (45%), Gaps = 2/187 (1%)
Frame = +3
Query: 174 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 353
F A + K A ++ +A +NGI +AMD SH+++ L + + FD+Y
Sbjct: 4 FRAYQEEARYFKYAFNAAGKVVEEAPLIVTENGIVSRAMDASHIAMAVLEMPWEMFDEYE 63
Query: 354 CDRN-ISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
+ + G+++ +++I++ A D +T++ +D + V S E+ E +L +
Sbjct: 64 PPSDELMYGLDMEEVTRIVRRARVTDEITLEGEDE-EEVIIKLGSSGYER----EFRLRS 118
Query: 531 LDLEHL-GIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSAN 707
+D++ + PE +++ + + RD +++ + F A G+ G
Sbjct: 119 IDIDDIPDEPELDFAVEVTVVPDFIQDAVRDADLVSDTVKVGAKGNTFYFKAEGERGRVI 178
Query: 708 VKLAQTA 728
K+ + A
Sbjct: 179 PKVQEGA 185
>UniRef50_UPI00015BB244 Cluster: DNA polymerase sliding clamp
subunit A; n=1; Ignicoccus hospitalis KIN4/I|Rep: DNA
polymerase sliding clamp subunit A - Ignicoccus
hospitalis KIN4/I
Length = 248
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Frame = +3
Query: 195 SSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISM 374
+ I + +++AI ++ + G++++A+D + V ++ + + AD F +Y + S+
Sbjct: 8 AKIFQSLVDAIGKIVDEVALVAKPEGVEMKAIDPAQVVMIRIYIPADAFSEYEVEEEESL 67
Query: 375 GMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFES--------PNQEKVSDYEMKLMN 530
G N+G + K K A + + ++ + V E PN E VS+ L N
Sbjct: 68 GFNIGDILKFFKRAKKGYKLELGSEAEGSKIRIVLEGALIKKYVIPNLEVVSEELPDLSN 127
Query: 531 LDLE 542
LD +
Sbjct: 128 LDFK 131
>UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5;
Thermoplasmatales|Rep: DNA polymerase sliding clamp -
Thermoplasma acidophilum
Length = 246
Score = 47.6 bits (108), Expect = 4e-04
Identities = 17/79 (21%), Positives = 46/79 (58%)
Frame = +3
Query: 204 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMN 383
LK++ + + ++++A F D+NG+ + A+D +HV+++ L + + F ++ D + ++
Sbjct: 11 LKEITDLLSTIVSEAKFRVDENGMSVTAVDPAHVAMIRLEVPKEAFVEFHTDGQEEIALD 70
Query: 384 LGSMSKILKCAGDKDTVTI 440
+ + +++ A + V I
Sbjct: 71 IDRLKSVIRLASSSENVGI 89
>UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2;
Nanoarchaeum equitans|Rep: DNA polymerase sliding clamp
- Nanoarchaeum equitans
Length = 249
Score = 46.8 bits (106), Expect = 7e-04
Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Frame = +3
Query: 204 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC--DRNISMG 377
LKK++ + DL+++ F + GI+L AMD + +++V ++ + F Y D+ I +
Sbjct: 11 LKKIVPIVADLISEGQFVATEEGIKLVAMDPASIAMVIWEMKPEAFIDYTIEGDKEI-IT 69
Query: 378 MNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 557
+++ + I+K ++ V + D N + +K + + L+ + IP
Sbjct: 70 VSMDDLKTIVKKLKQREMV-VWETDREKNKLKILARGTIKKT--FSIPLLEGEETETPIP 126
Query: 558 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEG-VKFSATGDIGSANVKLAQ 722
EY+ + + S I D S +S+ + A G++ V+L +
Sbjct: 127 SLEYNNVVELDSKAIKEIIDDASAIADSLKFKAEPPSKLIIKAEGEMKEMTVELTE 182
>UniRef50_A4YCS6 Cluster: Putative uncharacterized protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Putative
uncharacterized protein - Metallosphaera sedula DSM 5348
Length = 247
Score = 42.3 bits (95), Expect = 0.015
Identities = 34/169 (20%), Positives = 70/169 (41%)
Frame = +3
Query: 171 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 350
MF A S ++ +I + + T + + GI + + + V + + + D ++Y
Sbjct: 1 MFRAIYGSSRDFYYIVSSISKISDELTLNFTEEGIGSKYLTDDKVMMGVVEIGKDALEEY 60
Query: 351 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 530
++ IS+ +NLG + KIL + +V I + ++ E S +K
Sbjct: 61 SIEKPISVKLNLGELKKILSKMKGRSSVEITETNEGIRISMKDEKTGTR--SSLSIKAEK 118
Query: 531 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKF 677
+ + L P +S T+ + + + + Q GE + I + V F
Sbjct: 119 GEPQILKEPSVAHSVTMGIGGDILSILVDESMQVGEEVEIKAEDDHVSF 167
>UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9;
Francisella tularensis|Rep: Putative uncharacterized
protein - Francisella tularensis subsp. novicida
GA99-3549
Length = 279
Score = 35.5 bits (78), Expect = 1.8
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 333 DGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFV-FESPNQEKVSD 509
D F K+R +N+ +++G C D + +K ++ N+T + F + NQEK+S
Sbjct: 59 DSFSKFRGFKNV---LDIG-------CGAGSDLLVVKKYNDKANLTGIDFGNWNQEKLSK 108
Query: 510 YEMKLMNLDLEHLGIP 557
+ L+NLD+E +P
Sbjct: 109 NNINLINLDIEKDKLP 124
>UniRef50_Q9NA32 Cluster: Putative uncharacterized protein; n=3;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 169
Score = 35.5 bits (78), Expect = 1.8
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +3
Query: 306 SLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFES 485
S++ L +RA GF ++ + N M+ ++ GD + K++D N+T+V
Sbjct: 3 SVLRLAMRAKGFSRFLAETQAFPVKNRHFMTSSVRKTGDFEYEDPKSEDEVVNITYVLRD 62
Query: 486 PNQE----KVSDYEMKLMN-LDLEHLGIPETEYSCT 578
+ KV D M L + D+E G E +C+
Sbjct: 63 GTERKIRGKVGDNVMFLAHRYDIEMEGACEASLACS 98
>UniRef50_Q7D6X4 Cluster: Substrate--CoA ligase, putative; n=13;
Actinomycetales|Rep: Substrate--CoA ligase, putative -
Mycobacterium tuberculosis
Length = 1168
Score = 35.1 bits (77), Expect = 2.3
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -3
Query: 363 SYRSGTCQSHQLGE*VTRETHESCP*PVTEFHC 265
SY +G S GE + RE HE C PVT F C
Sbjct: 941 SYANGYANSKWAGEVLLREAHEQCGLPVTVFRC 973
>UniRef50_A7C6V8 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 161
Score = 34.3 bits (75), Expect = 4.1
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 SSILKKVLEAIKDLLTQA--TFDCDDNGIQLQAMDNSHVSLVSLTLRAD 335
S L+K+ ++DLLTQA T D + + L A++ + SL SLT + D
Sbjct: 53 SETLQKLTAKVRDLLTQALPTHDMEALSVSLDALEPTQTSLSSLTAQID 101
>UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 06 contig 1, DNA
sequence - Ostreococcus tauri
Length = 101
Score = 34.3 bits (75), Expect = 4.1
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -2
Query: 268 LSSQSKVACVSRSLIASSTFFKIELRSKRASNM 170
+ S SK+A V+RSL S TF +I KRASNM
Sbjct: 59 VGSASKLASVTRSLTESRTFLRIAPSVKRASNM 91
>UniRef50_Q550G9 Cluster: Proliferating cell nuclear antigen family
protein; n=2; Dictyostelium discoideum|Rep:
Proliferating cell nuclear antigen family protein -
Dictyostelium discoideum AX4
Length = 164
Score = 34.3 bits (75), Expect = 4.1
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +3
Query: 459 DNVTFVFESPNQEKVSDYEMKLMNLDL-EHLGIPET-EYSCTIRMPSSEFARICRDLSQF 632
++V F+ + +S++++ + +D+ E I E EY C + MPS+ + IC +L +
Sbjct: 5 EDVMFIRVIKSNGTISNFKVPEVCVDIKEKYEISENDEYQCEVLMPSNLLSDICNELKSY 64
Query: 633 GE-SMVISCTKEGVKFSATGDIGSANVKL 716
+ ++ I K + F I +A++ L
Sbjct: 65 KDLNLKIQVNKNNLLFKIDDSIINADIVL 93
>UniRef50_A5K9Z2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 898
Score = 34.3 bits (75), Expect = 4.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 390 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYE 515
S+ LK G DT+ K+ DNA+NV F+ Q ++D E
Sbjct: 855 SIYNTLKTKGKVDTLYFKSYDNAENVAFLMRQSKQRILADVE 896
>UniRef50_Q8PVV8 Cluster: Geranylgeranyl reductase; n=5;
Methanosarcina|Rep: Geranylgeranyl reductase -
Methanosarcina mazei (Methanosarcina frisia)
Length = 402
Score = 33.9 bits (74), Expect = 5.4
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +3
Query: 312 VSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPN 491
++L + FD + D+ G+++ S K+L C ++ V ++ N FV +
Sbjct: 99 IALLVSRKAFDNFLLDKARETGIDIHSGEKVLDCEEGEECVEVRTSQNTYLAKFVLIAEG 158
Query: 492 QEKVSDYEMK 521
E V Y ++
Sbjct: 159 SEGVLKYSVR 168
>UniRef50_Q1V1F8 Cluster: Putative uncharacterized protein; n=2;
Candidatus Pelagibacter ubique|Rep: Putative
uncharacterized protein - Candidatus Pelagibacter ubique
HTCC1002
Length = 197
Score = 33.5 bits (73), Expect = 7.1
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +3
Query: 396 SKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSC 575
++I+K + D A+ A +V F+ N +++S ++ ++L GI EY+
Sbjct: 124 NEIVKAVPEADVDRTSAEGKASSVQFIHFKLNDDQISKFKSDSATIEL---GIDHKEYTH 180
Query: 576 TIRMPSSEFARICRD 620
T ++ + +C D
Sbjct: 181 TTKLSENSIKSLCDD 195
>UniRef50_Q5JH70 Cluster: Oligosaccharyl transferase, STT3 subunit;
n=1; Thermococcus kodakarensis KOD1|Rep: Oligosaccharyl
transferase, STT3 subunit - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 1000
Score = 33.5 bits (73), Expect = 7.1
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 462 NVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSE 599
N T +FE+ N ++ D ++ + NL+++HL ET T+++P +E
Sbjct: 804 NGTLIFEAYNGTELVDRQVLVKNLNIDHLN--ETPVEVTVKIPQAE 847
>UniRef50_P38947 Cluster: Succinate-semialdehyde dehydrogenase
[NAD(P)+]; n=4; Bacteria|Rep: Succinate-semialdehyde
dehydrogenase [NAD(P)+] - Clostridium kluyveri
Length = 472
Score = 33.1 bits (72), Expect = 9.4
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 462 NVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFAR 608
N V P +KVS + ++LMN +L+ LG PE + PS E A+
Sbjct: 130 NTIIVAPHPKAKKVSAHTVELMNAELKKLGAPENIIQ-IVEAPSREAAK 177
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,510,398
Number of Sequences: 1657284
Number of extensions: 14405856
Number of successful extensions: 34611
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 33384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34574
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -