Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_M14
(895 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 97 5e-19
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 97 5e-19
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 93 1e-17
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 87 6e-16
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 52 3e-05
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 50 8e-05
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 47 6e-04
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 35 2.4
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 34 5.6
UniRef50_UPI0000F2E300 Cluster: PREDICTED: hypothetical protein;... 33 7.4
UniRef50_A7PC16 Cluster: Chromosome chr2 scaffold_11, whole geno... 33 7.4
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 97.1 bits (231), Expect = 5e-19
Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = +1
Query: 142 HKVHKVFTVQKVQGKGTL-PRXXSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD- 315
H+ HKV +K GK +L + RY RKQ GYGGQ+KPIF IVLRLEC +
Sbjct: 18 HQPHKVTQYKK--GKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEP 75
Query: 316 -CKVRSQVALKXCKHFELGGDKKRKGQMIQF 405
C+ + +A+K CKHFELGGDKKRKGQ+IQF
Sbjct: 76 NCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 97.1 bits (231), Expect = 5e-19
Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = +1
Query: 142 HKVHKVFTVQKVQGKGTL-PRXXSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD- 315
H+ HKV +K GK +L + RY RKQ GYGGQ+KPIF IVLRLEC +
Sbjct: 18 HQPHKVTQYKK--GKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEP 75
Query: 316 -CKVRSQVALKXCKHFELGGDKKRKGQMIQF 405
C+ + +A+K CKHFELGGDKKRKGQ+IQF
Sbjct: 76 NCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +1
Query: 142 HKVHKVFTVQKVQGKGTLPRXXSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCK 321
H HKV T K + + RY RKQ G+GGQ+KPIF IVLR+EC +CK
Sbjct: 19 HTNHKV-TQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECK 77
Query: 322 VRSQVALKXCKHFELGGDKKRKGQMIQF 405
+ Q+ +K CKHFELGG KK +GQ+IQF
Sbjct: 78 HKKQLPIKRCKHFELGGQKKSRGQVIQF 105
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 87.0 bits (206), Expect = 6e-16
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 124 AKNVXCHKVHKVFTVQKVQGKGTLP-RXXSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLR 300
+K H +HKV +K GK +L + RY RKQ GYGGQ+KP+F IVLR
Sbjct: 60 SKECRKHTLHKVTQYKK--GKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLR 117
Query: 301 LECADCKVRSQVALKXCKHFELGGDKKRKG 390
L+C CK SQ +K CKHFE+GGDKK KG
Sbjct: 118 LQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 52.4 bits (120), Expect = 2e-05
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1
Query: 289 IVLRLECADCKVRSQVALKXCKHFELGGDKKRKG 390
IVL+L+C CK SQ +K CKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 51.6 bits (118), Expect = 3e-05
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 142 HKVHKVFTVQKVQGKGTLP-RXXSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADC 318
H HKVF +K GK +L + RY RKQQG+GGQ+KP+F + ++EC C
Sbjct: 2 HTPHKVFQYKK--GKDSLHVQGKRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKC 58
Query: 319 KVRSQVALKXC 351
K+ + C
Sbjct: 59 KIAQSLRESTC 69
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 50.0 bits (114), Expect = 8e-05
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 145 KVH-KVFTVQKVQGKGTL-PRXXSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADC 318
KVH ++ + + GK +L + RY RKQQGYGGQ+KP+F ++L C C
Sbjct: 16 KVHVEMKSYEYKPGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQVKNTKKPSIKLSCEIC 75
Query: 319 KVRSQVALKXCKHFEL 366
K +LK K F++
Sbjct: 76 KKEFIKSLKRTKRFQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 47.2 bits (107), Expect = 6e-04
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +1
Query: 211 RYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKXCKHFELGGDKKRK 387
RY RKQ+G+GG+ KPI I LR C CK + L + FE +KK+K
Sbjct: 40 RYDRKQKGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKKK 98
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 42.3 bits (95), Expect = 0.016
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = +2
Query: 233 VTVVSPNPSSKRRQKPLRKLCSVLSVQIAR*DHRLH*XDASTLSSVVTR 379
VTVV P+ SS RR +P R+L SV S AR DAST SSVVTR
Sbjct: 54 VTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVTR 102
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1
Query: 544 DPXMIXYIDXFGQTTTXMQ 600
DP MI YID FGQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 33.9 bits (74), Expect = 5.6
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 337 ALKXCKHFELGGDKKRKG 390
+++ CKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 33.9 bits (74), Expect = 5.6
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 142 HKVHKVFTVQKVQGKGTLPRXXSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADC 318
H H V V+K + L R+ R GYGG +P F I LRL C +C
Sbjct: 17 HTSHSVERVRKRKAS-ELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDEC 74
>UniRef50_UPI0000F2E300 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 197
Score = 33.5 bits (73), Expect = 7.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 102 PKQRRPSCKKCXMPQSPQGXHSTKSPRKRHAAQGXQP 212
P + P+C+ + G H T +PRKR A+QG +P
Sbjct: 107 PTNKEPTCRLHEQLRLRTGSHRTTTPRKRLASQGSRP 143
>UniRef50_A7PC16 Cluster: Chromosome chr2 scaffold_11, whole genome
shotgun sequence; n=6; Magnoliophyta|Rep: Chromosome
chr2 scaffold_11, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 410
Score = 33.5 bits (73), Expect = 7.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 75 AXTQKWCXFPKQRRPSCKKCXMPQSPQGXHSTKSPR 182
A + KWC K RRP C C P P+ K P+
Sbjct: 293 AISTKWCCRIKLRRPKCPACWKPSCPKCCCRPKCPK 328
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,035,205
Number of Sequences: 1657284
Number of extensions: 8758621
Number of successful extensions: 16040
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16025
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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