Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_M11
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 77 3e-15
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 60 5e-10
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 43 7e-05
SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|c... 33 0.071
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 27 2.7
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 27 3.5
SPAC1952.15c |rec24|mug6|meiotic recombination protein Rec24|Sch... 26 8.1
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 77.0 bits (181), Expect = 3e-15
Identities = 39/128 (30%), Positives = 63/128 (49%)
Frame = +1
Query: 316 RSKHTAIAYKDAIYVFGGDNGKSMLNDLIRFDIREKSWTKMGCMGIPPAPRYHHSAVVHR 495
R+ H A + D +Y+FGG +G + NDL + ++ +W+K+ G+ P PR H+A V
Sbjct: 243 RAGHVAFTFSDKLYIFGGTDGANFFNDLWCYHPKQSAWSKVETFGVAPNPRAGHAASVVE 302
Query: 496 SSMFVFGGYTGDILANSNLTNKNDLFEYKFQNAQWVRWKFTGQEPVPRSAHGAAVYXDKL 675
++VFGG D T NDL+ ++ + W + P PRS+H + L
Sbjct: 303 GILYVFGGRASD------GTFLNDLYAFRLSSKHWYKLSDLPFTPSPRSSHTLSCSGLTL 356
Query: 676 WIFAGYDG 699
+ G G
Sbjct: 357 VLIGGKQG 364
Score = 71.7 bits (168), Expect = 1e-13
Identities = 52/181 (28%), Positives = 71/181 (39%), Gaps = 4/181 (2%)
Frame = +1
Query: 316 RSKHTAIAYKDAIYVFGG----DNGKSMLNDLIRFDIREKSWTKMGCMGIPPAPRYHHSA 483
R H +I +A VFGG D N L + W K G P+ RY H+
Sbjct: 134 RLGHASILIGNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVWQKANASGARPSGRYGHTI 193
Query: 484 VVHRSSMFVFGGYTGDILANSNLTNKNDLFEYKFQNAQWVRWKFTGQEPVPRSAHGAAVY 663
S + +FGG D N + DL +++W P R+ H A +
Sbjct: 194 SCLGSKICLFGGRLLDYYFNDLVCF--DLNNLNTSDSRWELASVVNDPPPARAGHVAFTF 251
Query: 664 XDKLWIFAGYDGNARLNDMWTIDLVGETHQWEKVEQKGECPPTCCNFPVAVAXXKMFVFS 843
DKL+IF G DG ND+W + W KVE G P +V ++VF
Sbjct: 252 SDKLYIFGGTDGANFFNDLWCYH--PKQSAWSKVETFGVAPNPRAGHAASVVEGILYVFG 309
Query: 844 G 846
G
Sbjct: 310 G 310
Score = 67.3 bits (157), Expect = 3e-12
Identities = 50/210 (23%), Positives = 84/210 (40%), Gaps = 7/210 (3%)
Frame = +1
Query: 250 GPFETVHKWKRMSECYEFVGAKRSKHTAIAYKDA---IYVFGGDNGKSM-LNDLIRFDIR 417
G T W +++ R H + Y + IY+FGG S NDL ++
Sbjct: 58 GSHITASPWSKLTVRGSSNVLPRYSHASHLYAEGGQEIYIFGGVASDSQPKNDLWVLNLA 117
Query: 418 EKSWTKMGCMGIPPAPRYHHSAVVHRSSMFVFGGYTGDILANSNLTNKNDLFEYKFQNAQ 597
+T + +G P+PR H++++ ++ VFGG T +A+ N L+ +
Sbjct: 118 TSQFTSLRSLGETPSPRLGHASILIGNAFIVFGGLTNHDVAD---RQDNSLYLLNTSSLV 174
Query: 598 WVRWKFTGQEPVPRSAHGAAVYXDKLWIFAGYDGNARLNDMWTIDLVG---ETHQWEKVE 768
W + +G P R H + K+ +F G + ND+ DL +WE
Sbjct: 175 WQKANASGARPSGRYGHTISCLGSKICLFGGRLLDYYFNDLVCFDLNNLNTSDSRWELAS 234
Query: 769 QKGECPPTCCNFPVAVAXXKMFVFSGXSGA 858
+ PP K+++F G GA
Sbjct: 235 VVNDPPPARAGHVAFTFSDKLYIFGGTDGA 264
Score = 49.2 bits (112), Expect = 8e-07
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 274 WKRMSECYEFVGAKRSKHTAIAYKDAIYVFGGD-NGKSMLNDLIRFDIREKSWTKMGCMG 450
W ++ E + R+ H A + +YVFGG + + LNDL F + K W K+ +
Sbjct: 280 WSKV-ETFGVAPNPRAGHAASVVEGILYVFGGRASDGTFLNDLYAFRLSSKHWYKLSDLP 338
Query: 451 IPPAPRYHHSAVVHRSSMFVFGGYTGDILANSNL 552
P+PR H+ ++ + GG G ++SN+
Sbjct: 339 FTPSPRSSHTLSCSGLTLVLIGGKQGKGASDSNV 372
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 59.7 bits (138), Expect = 5e-10
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Frame = +1
Query: 316 RSKHTAIAYKDAIYVFGGDNGKSML------NDLIRFDIREKSWTKMGCMGIPPAPRYHH 477
R H+ + D IY+FGG + ++ N L ++ + W + P+PR H
Sbjct: 113 RVGHSIVCSADTIYLFGGCDSETDSTFEVGDNSLYAYNFKSNQWNLVSTQSPLPSPRTGH 172
Query: 478 SAVVHRSSMFVFGG-----YTGDI------------------LANSNLTNKNDLFEYKFQ 588
S ++ S +++FGG Y DI AN+N K ++ E+
Sbjct: 173 SMLLVDSKLWIFGGECQGKYLNDIHLFDTKGVDRRTQSELKQKANANNVEKANM-EFDET 231
Query: 589 NAQWVRWKFTGQEPVPRSAHGAAVYXDKLWIFAGYDGNARLNDMWTIDLVGETHQWEKVE 768
+ W P PRS H + K+++ G++ L+D+W DL ET W +V
Sbjct: 232 DWSWETPFLHSSSPPPRSNHSVTLVQGKIFVHGGHNDTGPLSDLWLFDL--ETLSWTEVR 289
Query: 769 QKGECP 786
G P
Sbjct: 290 SIGRFP 295
Score = 55.2 bits (127), Expect = 1e-08
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Frame = +1
Query: 286 SECYEFVGAKRSKHTAIAYKDAIYVFGGDNGKSMLNDLIRFDIREKSWTKMGCMGIPPAP 465
++ +++ K + A + +Y+ GG + N L + D+ + +P
Sbjct: 52 NQSFKWEAVKPASCLDAANEKFMYLHGGREKSGISNSLFKLDLDSCTVYSHNRGEDNDSP 111
Query: 466 -RYHHSAVVHRSSMFVFGGYTGDILANSNLTNKNDLFEYKFQNAQWVRWKFTGQEPVPRS 642
R HS V ++++FGG + + + + N L+ Y F++ QW P PR+
Sbjct: 112 ARVGHSIVCSADTIYLFGGCDSETDSTFEVGD-NSLYAYNFKSNQWNLVSTQSPLPSPRT 170
Query: 643 AHGAAVYXDKLWIFAGYDGNARLNDMWTIDLVG 741
H + KLWIF G LND+ D G
Sbjct: 171 GHSMLLVDSKLWIFGGECQGKYLNDIHLFDTKG 203
Score = 54.8 bits (126), Expect = 2e-08
Identities = 38/134 (28%), Positives = 61/134 (45%)
Frame = +1
Query: 199 EQLRNPNELDISLRMEFGPFETVHKWKRMSECYEFVGAKRSKHTAIAYKDAIYVFGGDNG 378
+Q N N ++ MEF ET W+ + RS H+ + I+V GG N
Sbjct: 213 KQKANANNVE-KANMEFD--ETDWSWETPF-LHSSSPPPRSNHSVTLVQGKIFVHGGHND 268
Query: 379 KSMLNDLIRFDIREKSWTKMGCMGIPPAPRYHHSAVVHRSSMFVFGGYTGDILANSNLTN 558
L+DL FD+ SWT++ +G P PR H A +++++GG N L
Sbjct: 269 TGPLSDLWLFDLETLSWTEVRSIGRFPGPREGHQATTIDDTVYIYGGRD-----NKGLI- 322
Query: 559 KNDLFEYKFQNAQW 600
N+L+ + + +W
Sbjct: 323 LNELWAFNYSQQRW 336
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 42.7 bits (96), Expect = 7e-05
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Frame = +1
Query: 457 PAPRYHHSAVVHRSSMFVFGGYTGDILANSNLTNKNDLFEYKFQNAQWVRWKFTG-QEPV 633
P P S + + FV+GG D L N+ L N D++ W + ++ G Q+P+
Sbjct: 29 PKPLIGESVIKYGDEAFVYGGR--DAL-NAQLVN--DMYVVDLNTCSWKQVEYQGNQKPI 83
Query: 634 PRSAHGAAVYXDKLWIFAGYDGNAR------LNDMWTIDLVGETHQWEKV 765
PR H ++ +KL F G N LND+ D+ ET QW +
Sbjct: 84 PRYFHSGDLWNNKLIFFGGMGFNDDTKCLYVLNDIDIYDI--ETKQWSHI 131
>SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 716
Score = 32.7 bits (71), Expect = 0.071
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Frame = +1
Query: 310 AKRSKHTAIAY-KD-AIYVFGGDNGKSMLNDLIRFDIREKSWTKMGCMGIPPAPRYHHSA 483
++RS H + KD IY++GG +G +D +++ + W GI P R H
Sbjct: 261 SRRSGHQMVYNPKDNCIYLYGGWDGVKTFSDFWIYNVDKDLWIMENEYGI-PGERVCHRM 319
Query: 484 VVHRS--SMFVFGGYTGDILANSNLTN-KNDLFEYKFQNAQWVRWKF-TGQEPVPRSA-- 645
V+ S +++ G Y G + + D +E+ W + T ++ P +
Sbjct: 320 VIDTSQQKLYLLGNYFGSSRETEVPPDARTDFWEFDISKKVWTCLSYDTSKDGGPAAIFD 379
Query: 646 HGAAV 660
HG +V
Sbjct: 380 HGMSV 384
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 27.5 bits (58), Expect = 2.7
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 712 NDMWTIDLVGETHQWEKVEQKG 777
N+MWT+D +G+ + W++ E G
Sbjct: 559 NEMWTLDDMGKLYVWQEDEIMG 580
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 499 MNDVPQLNDDILGLEVYPYSP 437
+ND+PQLN +G V+ ++P
Sbjct: 586 LNDIPQLNSSTIGSYVHSHNP 606
>SPAC1952.15c |rec24|mug6|meiotic recombination protein
Rec24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 350
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 135 KVYVEIRRKRNQNAEHCKDDNRTTTEPK 218
K Y+E RK ++ EHC+ T EP+
Sbjct: 47 KDYIEALRKGIEDQEHCEKYASTLLEPR 74
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,739,021
Number of Sequences: 5004
Number of extensions: 83926
Number of successful extensions: 211
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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