Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_M10
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.014
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.032
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.056
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.073
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.097
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.39
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.2
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 3.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 1/76 (1%)
Frame = +2
Query: 674 PPRXTPXKXXPXPXXXXXPTPXXPXKGXPPPXPNXXXXPXXXXXXXXXGPPPXXXQPXPP 853
PP P P P P G PP P P P PP
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 854 XXPPPXSPP-PXPKXG 898
PP +PP P P G
Sbjct: 1191 VPPPSEAPPVPKPSVG 1206
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/73 (27%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
Frame = +2
Query: 677 PRXTPXKXXPX-PXXXXXPTPXXPXKGXPPPXPNXXXXPXXXXXXXXXGPPPXXXQPXPP 853
P P P P P P K P P P+ P P P P P
Sbjct: 995 PLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPK 1054
Query: 854 XXP-PPXSPPPXP 889
P +PPP P
Sbjct: 1055 SSSGAPSAPPPVP 1067
Score = 29.9 bits (64), Expect = 0.52
Identities = 21/87 (24%), Positives = 23/87 (26%), Gaps = 2/87 (2%)
Frame = +2
Query: 638 KTXPXNPETXXXPPRXTPXKXXPXPXXXXXPTPXXPXKGXP--PPXPNXXXXPXXXXXXX 811
K P + PP P P P P G P PP
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Query: 812 XXGPPPXXXQPXPPXXPPPXSPPPXPK 892
PP PP P + PP PK
Sbjct: 1080 SGAPPVPAPSGIPPVPKPSVAAPPVPK 1106
Score = 29.5 bits (63), Expect = 0.68
Identities = 24/88 (27%), Positives = 25/88 (28%), Gaps = 4/88 (4%)
Frame = +2
Query: 641 TXPXNPETXXXPPRXTPXKXXPX-PXXXXXPT---PXXPXKGXPPPXPNXXXXPXXXXXX 808
T P P PP P P P+ P P PP P P
Sbjct: 1039 TAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPS 1098
Query: 809 XXXGPPPXXXQPXPPXXPPPXSPPPXPK 892
P P PP P P PP PK
Sbjct: 1099 VAAPPVPKPSVAVPPV-PAPSGAPPVPK 1125
Score = 29.1 bits (62), Expect = 0.90
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 188 PPPPXXXXXPCPPPPXXXXPPPPXXXPPPPP 280
P PP P P P P PP PP P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 1/74 (1%)
Frame = +2
Query: 674 PPRXTPXKXXPXPXXXXXPTPXXPXKGXPP-PXPNXXXXPXXXXXXXXXGPPPXXXQPXP 850
P P P P P P PP P P+ P PP
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG---APPVPKPSVAA 1130
Query: 851 PXXPPPXSPPPXPK 892
P P P PP PK
Sbjct: 1131 PPVPVPSGAPPVPK 1144
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/81 (23%), Positives = 19/81 (23%)
Frame = +2
Query: 647 PXNPETXXXPPRXTPXKXXPXPXXXXXPTPXXPXKGXPPPXPNXXXXPXXXXXXXXXGPP 826
P P PP P P P PP P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 827 PXXXQPXPPXXPPPXSPPPXP 889
P PP P PP P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVP 1192
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/84 (27%), Positives = 23/84 (27%), Gaps = 3/84 (3%)
Frame = +2
Query: 647 PXNPETXXXPPRXTPX---KXXPXPXXXXXPTPXXPXKGXPPPXPNXXXXPXXXXXXXXX 817
P P PP P P P P P P G PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK-PAAGVPPVPPPSEAPPVPKPSVGV- 1207
Query: 818 GPPPXXXQPXPPXXPPPXSPPPXP 889
PP PP P PP P
Sbjct: 1208 -PPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 1/41 (2%)
Frame = +1
Query: 190 PPPXXXXXPXPPP-PXXXXPPPPXXXPPPPPXXXXXPXXXP 309
P P P PPP P P PP PP P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/73 (26%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = +2
Query: 674 PPRXTPXKXXPXPXXXXXPTPXXPXKGXPP-PXPNXXXXPXXXXXXXXXGPPPXXXQPXP 850
PP P P P G PP P P+ P PP P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAV--PPVPAPSGAP 1121
Query: 851 PXXPPPXSPPPXP 889
P P + PP P
Sbjct: 1122 PVPKPSVAAPPVP 1134
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Frame = +1
Query: 193 PPXXXXXPXPPPPXXXXP-PPPXXXPP-PPPXXXXXPXXXP 309
PP P P P P PPP PP P P P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/74 (27%), Positives = 20/74 (27%), Gaps = 2/74 (2%)
Frame = +2
Query: 677 PRXTPXKXXPXPXXXXXPTPXXPXK--GXPPPXPNXXXXPXXXXXXXXXGPPPXXXQPXP 850
P P K P P P PP P PP P
Sbjct: 982 PTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 851 PXXPPPXSPPPXPK 892
P P P S PP PK
Sbjct: 1042 PV-PIPTSTPPVPK 1054
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/82 (24%), Positives = 21/82 (25%), Gaps = 1/82 (1%)
Frame = +2
Query: 647 PXNPETXXXPPRXTPXKXXPXPXXXXXPTPXXPXKGXPPPXPNXXXXPXXXXXXXXXGPP 826
P P PP P P P P PP P P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPV 1133
Query: 827 PXXXQPXPPXXPPPXSPP-PXP 889
P P P +PP P P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAP 1155
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 191 PPPXXXXXPCPPPPXXXXPPPPXXXPPPPP 280
P P P P P P PP PP P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/73 (26%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = +2
Query: 674 PPRXTPXKXXPXPXXXXXPTPXXPXKGXPP-PXPNXXXXPXXXXXXXXXGPPPXXXQPXP 850
PP P + P P P P PP P P+ P PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP--VPVPTAKAPPVPAPSSEA 1246
Query: 851 PXXPPPXSPPPXP 889
P P S P P
Sbjct: 1247 PSVSTPRSSVPSP 1259
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/47 (27%), Positives = 13/47 (27%)
Frame = +1
Query: 190 PPPXXXXXPXPPPPXXXXPPPPXXXPPPPPXXXXXPXXXPXXXGGEP 330
P P P P P P P PP P P G P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Frame = +2
Query: 185 LPPPPXXXXXPCPPPPXXXXPP---PPXXXPPPPP 280
+PP P P PP PP P PP PP
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 190 PPPXXXXXPXPPPPXXXXPPPPXXXPPPPP 279
P P P PPP P P PP P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.014
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 188 PPPPXXXXXPCP-PPPXXXXPPPPXXXPPPPP 280
PPPP P P P P PP P PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
Score = 35.1 bits (77), Expect = 0.014
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 188 PPPPXXXXXPCPPPPXXXXPPPPXXXPPPPP 280
PP P P PPPP P PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.1 bits (72), Expect = 0.056
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 728 PTPXXPXKGXPPPXPNXXXXPXXXXXXXXXGPPPXXXQPXPPXXPPPXSPPPXP 889
P P P P P P P GPPP P PP PPP P
Sbjct: 732 PPPPPPAVIVPTPAP--APIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.1 bits (72), Expect = 0.056
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +1
Query: 190 PPPXXXXXPXPPP-PXXXXPPPPXXXPPPPPXXXXXPXXXP 309
P P P PPP P PPPP PPPP P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPP---PPPPGVAGAGPPPPP 779
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +1
Query: 730 NPXXPXKGXPPPTXXPXXXXXXGXXXXXXGPPPAXXPTXPPXXXPPPXPP 879
+P P PT P GPPP P PPP PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Frame = +1
Query: 214 PXPPPPXXXXP---PPPXXXPPPPPXXXXXPXXXP 309
P PPPP P P P PPP P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 3/33 (9%)
Frame = +1
Query: 190 PPPXXXXXPXPPPPXXXXPPPP---XXXPPPPP 279
PPP P P PPP PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.032
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 214 PXPPPPXXXXPPPPXXXPPPPP 279
P PPPP PP PPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 821 PPPXXXQPXPPXXPPPXSPPPXPKXG 898
PPP P PP PP PPP P G
Sbjct: 9 PPPP---PPPPGFEPPSQPPPPPPPG 31
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.056
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 196 PXXXXXPXPPPPXXXXPPPPXXXPPP--PPXXXXXP 297
P P PPPP PPPP P P PP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 32.7 bits (71), Expect = 0.073
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 193 PPXXXXXPXPPPPXXXXPPPPXXXPPPPPXXXXXPXXXP 309
PP PP PPPP PPPP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 29.5 bits (63), Expect = 0.68
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +1
Query: 709 PXXXXXTNPXXPXKGXPPPTXXPXXXXXXGXXXXXXGPPPAXXPTXPPXXXPPPXPPS 882
P T P P PP P PP P PP PPP P S
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPM--PAGPPSAPPPPLPAS 1738
Score = 29.5 bits (63), Expect = 0.68
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 190 PPPXXXXXPXPPPPXXXXPPPPXXXPPPPP 279
PPP P PP PP PPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.1 bits (62), Expect = 0.90
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 188 PPPPXXXXXPCPPPPXXXXPPPPXXXPPPP 277
PPPP PPP P P PPPP
Sbjct: 1707 PPPPPMSVP--PPPSAPPMPAGPPSAPPPP 1734
Score = 29.1 bits (62), Expect = 0.90
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +2
Query: 821 PPPXXXQPXPPXXPP-PXSPPPXP 889
PPP P PP PP P PP P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 3/47 (6%)
Frame = +2
Query: 758 PPPXPNXXXXPXXXXXXXXXGP---PPXXXQPXPPXXPPPXSPPPXP 889
PP P P P PP P P PP PPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/48 (29%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Frame = +2
Query: 641 TXPXNPETXXXPPRXTPXKXXPX----PXXXXXPTPXXPXKGXPPPXP 772
T P P++ P P P P P P P PPP P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +2
Query: 185 LPPPPXXXXXPCPPPPXXXXPPPPXXXPPPP 277
+PPPP P PP P P P P
Sbjct: 1714 VPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/46 (28%), Positives = 13/46 (28%)
Frame = +1
Query: 193 PPXXXXXPXPPPPXXXXPPPPXXXPPPPPXXXXXPXXXPXXXGGEP 330
P P P P PPPPP P P G P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.073
Identities = 19/79 (24%), Positives = 23/79 (29%)
Frame = +2
Query: 647 PXNPETXXXPPRXTPXKXXPXPXXXXXPTPXXPXKGXPPPXPNXXXXPXXXXXXXXXGPP 826
P P++ PP P + P P P PP P+ P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPS---PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Query: 827 PXXXQPXPPXXPPPXSPPP 883
P PP PPP
Sbjct: 187 APSLPSAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 6/46 (13%)
Frame = +1
Query: 190 PPPXXXXXPXPPPPXXXXPPP-PXXXPP-----PPPXXXXXPXXXP 309
PP P PPP PP P PP PPP P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +2
Query: 188 PPPPXXXXXPCPPPPXXXXPPPPXXXPPPPP 280
P P P PP PPP PP P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 5/34 (14%)
Frame = +1
Query: 190 PPPXXXXXPXPPPPXXXX-----PPPPXXXPPPP 276
PPP P PP PP P PPPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +2
Query: 185 LPPPPXXXXXPCPPPPXXXXPPP-PXXXPPPP 277
L PP P PPP PP P PP P
Sbjct: 137 LRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.097
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = -3
Query: 408 GAXXGXFFXXFGXPPPXXPXXXXXXXGFPPXXXXXXXXXXXXXGGGGGXXXGGGGXXXXG 229
G G F G PPP P GF GGG G GG G G
Sbjct: 187 GGGFGGFGGGSGGPPPG-PGGFGGFGGF--GGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 228 GGGXGXXXXXGGGG 187
GG G GGG
Sbjct: 244 PGGFGGGLGGFGGG 257
Score = 31.1 bits (67), Expect = 0.22
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 335 FXGSPPXXXGXXXGXXXXXGGGGGXXXGGGGXXXXGGGGXGXKXXXG 195
F G P G G GG GG G GG GGG G G
Sbjct: 226 FGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXGXXXXXGGGG 187
G GGG GGG GGG G GG G
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.39
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 308 GXXXGXXXXXGGGGGXXXGGGGXXXXGGGGXGXKXXXGGGAK 183
G G GGG G GG G GG G GGAK
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 308 GXXXGXXXXXGGGGGXXXGGG-GXXXXGGGGXGXKXXXGGGA 186
G G GGG G GGG G G GG G GG+
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGS 60
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 308 GXXXGXXXXXGGGGGXXXGGGGXXXXGGGGXGXKXXXGGGAK 183
G G GG GG G GG GGG G + GGA+
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGG---FGGGRGGARGGGRGGAR 44
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGGGGXGXKXXXGGGAK 183
GG G G GG GG G + GGAK
Sbjct: 41 GGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = -1
Query: 320 PXXXGXXXGXXXXXGGGGGXXXG-GGGXXXXGGGGXGXKXXXGGG 189
P G G GG G G GGG GGG G GG
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +2
Query: 188 PPP---PXXXXXPCPPPPXXXXPPPPXXXPPPPP 280
PPP P P P PPPP PPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPP---PPPPP 197
Score = 26.2 bits (55), Expect = 6.4
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 4/68 (5%)
Frame = +2
Query: 674 PPRXTPXKXXPXPXXXXXPTPXXPXKGXPPPXPNXXXXPXXXXXXXXXGP----PPXXXQ 841
PP TP + P P P P PP N P G PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPT-----LPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPAT 278
Query: 842 PXPPXXPP 865
P P PP
Sbjct: 279 PSQPPRPP 286
Score = 24.2 bits (50), Expect(2) = 2.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 842 PXPPXXPPPXSPP 880
P PP PPP PP
Sbjct: 236 PAPPPPPPPTLPP 248
Score = 21.4 bits (43), Expect(2) = 2.7
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +2
Query: 827 PXXXQPXPPXXPPP 868
P P PP PPP
Sbjct: 184 PSDYNPPPPPPPPP 197
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/84 (23%), Positives = 22/84 (26%)
Frame = +2
Query: 647 PXNPETXXXPPRXTPXKXXPXPXXXXXPTPXXPXKGXPPPXPNXXXXPXXXXXXXXXGPP 826
P PE P R P P P P P P PP
Sbjct: 611 PVAPEVPSVPQRPAVPVVPEAPSVPQPPAA--PVVPEVPSVPQRPAVPVVPEAPSVPQPP 668
Query: 827 PXXXQPXPPXXPPPXSPPPXPKXG 898
P P P P + P P+ G
Sbjct: 669 AAPVVPEVPSVPQPPAVPVVPEAG 692
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/80 (26%), Positives = 24/80 (30%), Gaps = 5/80 (6%)
Frame = +2
Query: 653 NPETXXXPPRXTPXKXXPXPXXXXXPT--PXXPX--KGXPPPXPNXXXXPXXXXXXXXXG 820
N PP TP P P+ P P PP P+ P
Sbjct: 408 NASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP 467
Query: 821 P-PPXXXQPXPPXXPPPXSP 877
P PP P P P P +P
Sbjct: 468 PLPPAAPAPPPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Frame = +3
Query: 675 PPAXHPQXXXPP-PPXKXNQPXPXXKRGXP--PHXXTXXXXXXGXPXXXXXAPPRXXXNX 845
PP P P PP P G P P P APP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 846 XPPXXPPPXPPLP 884
PP P P P P
Sbjct: 475 APPPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/63 (25%), Positives = 17/63 (26%), Gaps = 1/63 (1%)
Frame = +2
Query: 704 PXPXXXXXPTPXXPXKGXPPPXPNXXXXPXXXXXXXXXGPP-PXXXQPXPPXXPPPXSPP 880
P P P PP P PP P PP P +PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 881 PXP 889
P P
Sbjct: 478 PAP 480
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 188 PPPPXXXXXPCPPPPXXXXPPPPXXXPPPPP 280
P PP P P PP P P PPP
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 193 PPXXXXXPXPPPPXXXXPPPPXXXPPPPPXXXXXP 297
PP P P PP P P PPP P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 8/39 (20%)
Frame = +2
Query: 188 PPPPXX---XXXPCPPPPXXXXPPPPXXXPP-----PPP 280
PPPP P PP PPPP P PPP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 185 LPPPPXXXXXPCPPPPXXXXPPPPXXXPPP 274
+P PP P PPPP P PPP
Sbjct: 351 IPLPPQGRSAPPPPPP--RSAPSTGRQPPP 378
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.151 0.545
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,977,031
Number of Sequences: 5004
Number of extensions: 35210
Number of successful extensions: 685
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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