Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_M10
(902 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 38 6e-04
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 33 0.016
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 33 0.016
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 31 0.036
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 31 0.048
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 30 0.084
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 29 0.15
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 29 0.26
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 28 0.45
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 28 0.45
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 26 1.8
EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calc... 25 2.4
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 25 2.4
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 25 3.1
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 25 4.2
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 24 7.3
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 24 7.3
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 9.6
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 37.5 bits (83), Expect = 6e-04
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXGXXXXXGGGG 187
G GGG GGGG G GG G GGGG
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGG 681
Score = 33.9 bits (74), Expect = 0.007
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -1
Query: 308 GXXXGXXXXXGGGGGXXXGGGGXXXXGGGGXGXKXXXGGG 189
G G GGGG GG G GGGG + GGG
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGG 690
Score = 31.1 bits (67), Expect = 0.048
Identities = 26/90 (28%), Positives = 27/90 (30%), Gaps = 4/90 (4%)
Frame = -3
Query: 897 PXXGXGGGXXGGGXX----GGXGWXXXGGGPXXXXXXXXXGXXXXXGCGGGXPFXGXXGV 730
P G GGG GGG GG G GGG G G GV
Sbjct: 650 PGSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGV 709
Query: 729 GXXXXXGXGXXFXGVXRGGXXXVSGFXGXV 640
G G G GG + G G V
Sbjct: 710 AGMMSTGAGVNRGG--DGGCGSIGGEVGSV 737
Score = 28.7 bits (61), Expect = 0.26
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXG 214
GGG G GGGG GGG G
Sbjct: 292 GGGVGGGGGGGGGGGGGGGSAG 313
Score = 28.7 bits (61), Expect = 0.26
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGGGGXG 213
GGG G GGGG GGG G
Sbjct: 292 GGGVGGGGGGGGGGGGGGGSAG 313
Score = 25.8 bits (54), Expect = 1.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXG 841
G GGG GGG GG G
Sbjct: 294 GVGGGGGGGGGGGGGG 309
Score = 25.8 bits (54), Expect = 1.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 878 GGXGGGXXXGGXVGXXAGGG 819
GG GG GG VG GGG
Sbjct: 722 GGDGGCGSIGGEVGSVGGGG 741
Score = 25.0 bits (52), Expect = 3.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 882 GGGXXGGGXXGGXGWXXXGGG 820
GGG GGG GG G GGG
Sbjct: 292 GGGVGGGGGGGGGG--GGGGG 310
Score = 25.0 bits (52), Expect = 3.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 296 GXXXXXGGGGGXXXGGGG 243
G GGGGG GGGG
Sbjct: 292 GGGVGGGGGGGGGGGGGG 309
Score = 25.0 bits (52), Expect = 3.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 296 GXXXXXGGGGGXXXGGGG 243
G GGGGG GGGG
Sbjct: 293 GGVGGGGGGGGGGGGGGG 310
Score = 25.0 bits (52), Expect = 3.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 273 GGGXXXGGGGXXXXGGGGXGXXXXXGGGG 187
G G GG G GG G GGGG
Sbjct: 716 GAGVNRGGDGGCGSIGGEVGSVGGGGGGG 744
Score = 24.2 bits (50), Expect = 5.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 252 GGGXXXXGGGGXGXXXXXGGGG 187
GGG GGGG G GGGG
Sbjct: 292 GGGVGGGGGGGGG---GGGGGG 310
Score = 23.8 bits (49), Expect = 7.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 888 GXGGGXXGGGXXGG 847
G GGG GGG GG
Sbjct: 297 GGGGGGGGGGGGGG 310
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 882 GGGXXGGGXXGGXGWXXXGGGP 817
GG GGG GG G GP
Sbjct: 293 GGVGGGGGGGGGGGGGGGSAGP 314
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXG 841
G GGG GGG G G
Sbjct: 298 GGGGGGGGGGGGGSAG 313
Score = 23.4 bits (48), Expect = 9.6
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXGXXXXXGGG 190
GGG G GGG G GGG
Sbjct: 679 GGGSGRSSSGGGMIGMHSVAAGAAVAAGGG 708
Score = 23.4 bits (48), Expect = 9.6
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGGGGXGXKXXXGGG 189
GGG G GGG G GGG
Sbjct: 679 GGGSGRSSSGGGMIGMHSVAAGAAVAAGGG 708
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 32.7 bits (71), Expect = 0.016
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXGXXXXXGGGGKKKXK 172
GGGGG GGGG GG G G G ++ K
Sbjct: 553 GGGGGGGGGGGGGGVGGGIGLSLGGAAGVDGSRRIK 588
Score = 29.9 bits (64), Expect = 0.11
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGGGGXGXKXXXGGGA 186
GGGGG GGGG GG G G GG A
Sbjct: 553 GGGGGGGGGGGG----GGVGGGIGLSLGGAA 579
Score = 26.2 bits (55), Expect = 1.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXGWXXXG 826
G GGG GGG GG G G
Sbjct: 557 GGGGGGGGGGVGGGIGLSLGG 577
Score = 26.2 bits (55), Expect = 1.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 878 GGXGGGXXXGGXVGXXAGG 822
GG GGG GG +G GG
Sbjct: 559 GGGGGGGGVGGGIGLSLGG 577
Score = 25.8 bits (54), Expect = 1.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXG 841
G GGG GGG GG G
Sbjct: 553 GGGGGGGGGGGGGGVG 568
Score = 25.0 bits (52), Expect = 3.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 296 GXXXXXGGGGGXXXGGGGXXXXGGGGXG 213
G GGGGG GGG GG G
Sbjct: 553 GGGGGGGGGGGGGGVGGGIGLSLGGAAG 580
Score = 24.6 bits (51), Expect = 4.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXGWXXXGG 823
G GGG GGG GG GG
Sbjct: 556 GGGGGGGGGGGVGGGIGLSLGG 577
Score = 23.4 bits (48), Expect = 9.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 881 EGGXGGGXXXGGXVGXXAGGG 819
+GG GGG GG G GGG
Sbjct: 552 KGGGGGGGGGGG--GGGVGGG 570
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 32.7 bits (71), Expect = 0.016
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXGXXXXXGGGGKKKXK 172
GGGGG GGGG GG G G G ++ K
Sbjct: 554 GGGGGGGGGGGGGGVGGGIGLSLGGAAGVDGSRRIK 589
Score = 29.9 bits (64), Expect = 0.11
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGGGGXGXKXXXGGGA 186
GGGGG GGGG GG G G GG A
Sbjct: 554 GGGGGGGGGGGG----GGVGGGIGLSLGGAA 580
Score = 26.2 bits (55), Expect = 1.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXGWXXXG 826
G GGG GGG GG G G
Sbjct: 558 GGGGGGGGGGVGGGIGLSLGG 578
Score = 26.2 bits (55), Expect = 1.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 878 GGXGGGXXXGGXVGXXAGG 822
GG GGG GG +G GG
Sbjct: 560 GGGGGGGGVGGGIGLSLGG 578
Score = 25.8 bits (54), Expect = 1.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXG 841
G GGG GGG GG G
Sbjct: 554 GGGGGGGGGGGGGGVG 569
Score = 25.0 bits (52), Expect = 3.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 296 GXXXXXGGGGGXXXGGGGXXXXGGGGXG 213
G GGGGG GGG GG G
Sbjct: 554 GGGGGGGGGGGGGGVGGGIGLSLGGAAG 581
Score = 24.6 bits (51), Expect = 4.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXGWXXXGG 823
G GGG GGG GG GG
Sbjct: 557 GGGGGGGGGGGVGGGIGLSLGG 578
Score = 23.4 bits (48), Expect = 9.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 881 EGGXGGGXXXGGXVGXXAGGG 819
+GG GGG GG G GGG
Sbjct: 553 KGGGGGGGGGGG--GGGVGGG 571
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 31.5 bits (68), Expect = 0.036
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 276 GGGGXXXGGGGXXXXGGGGXGXXXXXGGGGK 184
GGG GGGG GG G G G GG+
Sbjct: 58 GGGDDGYGGGGRGGRGGRGGGRGRGRGRGGR 88
Score = 29.1 bits (62), Expect = 0.19
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXGXXXXXGGGG 187
G GGG G GG G G G GGGG
Sbjct: 63 GYGGGGRGGRGGRGGGRGRGRGRGGRDGGGG 93
Score = 28.7 bits (61), Expect = 0.26
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 275 GGGGXXXGGGGXXXXGGGGXGXKXXXGGGAK 183
GGG GGGG GG G G G G +
Sbjct: 58 GGGDDGYGGGGRGGRGGRGGGRGRGRGRGGR 88
Score = 26.6 bits (56), Expect = 1.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXGXXXXXGGGG 187
G GG GGG G GG GGGG
Sbjct: 68 GRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98
Score = 25.4 bits (53), Expect = 2.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 296 GXXXXXGGGGGXXXGGGGXXXXGGGGXG 213
G G GGG G G GGGG G
Sbjct: 68 GRGGRGGRGGGRGRGRGRGGRDGGGGFG 95
Score = 24.6 bits (51), Expect = 4.2
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXGWXXXGGGPXXXXXXXXXGXXXXXGCGGG 757
G GGG G G G G GGG G G GGG
Sbjct: 56 GYGGGDDGYGGGGRGGRGGRGGG--RGRGRGRGGRDGGGGFGGG 97
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 255 GGGGXXXXGGGGXGXXXXXGGGGKKKXK 172
GGG GGG G GG G+ + +
Sbjct: 58 GGGDDGYGGGGRGGRGGRGGGRGRGRGR 85
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 31.1 bits (67), Expect = 0.048
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 276 GGGGXXXGGGGXXXXGG--GGXGXXXXXGGGGKKK 178
G GG GGG GG GG G GGGG+ +
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDR 235
Score = 30.7 bits (66), Expect = 0.063
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXGXXXXXGGGG 187
G GGG GGG GGG G GGGG
Sbjct: 201 GAGGGG--SGGGAPGGGGGSSGGPGPGGGGG 229
Score = 30.7 bits (66), Expect = 0.063
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXGWXXXGGGP 817
G GGG GGG GG G G GP
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGP 224
Score = 27.9 bits (59), Expect = 0.45
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -1
Query: 275 GGGGXXXGGGGXXXXGGGGXGXKXXXGGGAKKK 177
GGGG G G GG G GGG + +
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDR 235
Score = 25.8 bits (54), Expect = 1.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 320 PXXXGXXXGXXXXXGGGGGXXXGGGGXXXXGGGG 219
P G G GGGG GG G GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGS--SGGPGPGGGGGGG 231
Score = 25.8 bits (54), Expect = 1.8
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXX----XGGGGXGXK 207
G GGG GGGG GGGG G +
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGGGGGGR 233
Score = 25.4 bits (53), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXGWXXXGGG 820
G GGG GGG G GGG
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGG 228
Score = 25.0 bits (52), Expect = 3.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 270 GGXXXGGGGXXXXGGGGXG 214
GG GGG GGGG G
Sbjct: 162 GGRSSSGGGGGGGGGGGAG 180
Score = 25.0 bits (52), Expect = 3.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 269 GGXXXGGGGXXXXGGGGXG 213
GG GGG GGGG G
Sbjct: 162 GGRSSSGGGGGGGGGGGAG 180
Score = 25.0 bits (52), Expect = 3.1
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXGWXXXGGGPXXXXXXXXXGXXXXXGCGGGXPFXGXXGVGXXXXXG 709
G GGG GGG G G G GGG P G G G
Sbjct: 168 GGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPG-AGGGGSGGGAPGGGGGSSGGPGPGG 226
Query: 708 XG 703
G
Sbjct: 227 GG 228
Score = 23.8 bits (49), Expect = 7.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 878 GGXGGGXXXGGXVGXXAGGGP 816
GG GG GG G G GP
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGP 224
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 30.3 bits (65), Expect = 0.084
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 276 GGGGXXXGGGGXXXXGGGGXGXXXXXGGGG 187
GGG GG G GGG GGGG
Sbjct: 677 GGGSGAGGGAGSSGGSGGGLASGSPYGGGG 706
Score = 28.7 bits (61), Expect = 0.26
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXG 214
GGG G GGGG GGG G
Sbjct: 292 GGGVGGGGGGGGGGGGGGGSAG 313
Score = 28.7 bits (61), Expect = 0.26
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGGGGXG 213
GGG G GGGG GGG G
Sbjct: 292 GGGVGGGGGGGGGGGGGGGSAG 313
Score = 28.7 bits (61), Expect = 0.26
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 896 PXXXXEGGXGGGXXXGGXVGXXAGGG 819
P GG GGG GG G +GGG
Sbjct: 847 PLRGSSGGAGGGSSGGGGSGGTSGGG 872
Score = 27.9 bits (59), Expect = 0.45
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXGXXXXXGGGG 187
GG GG G G G G G GGG
Sbjct: 842 GGAGGPLRGSSGGAGGGSSGGGGSGGTSGGG 872
Score = 26.6 bits (56), Expect = 1.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 267 GXXXGGGGXXXXGGGGXGXXXXXGGG 190
G GG G GGGG G GGG
Sbjct: 549 GAGRGGVGSGIGGGGGGGGGGRAGGG 574
Score = 26.2 bits (55), Expect = 1.4
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 308 GXXXGXXXXXGGGGGXXXGGGGXXXXGGGGXGXKXXXGGGA 186
G G G GG G GG GGGG G + G GA
Sbjct: 540 GGSDGPEYEGAGRGGVGSGIGG---GGGGGGGGRAGGGVGA 577
Score = 26.2 bits (55), Expect = 1.4
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Frame = -1
Query: 308 GXXXGXXXXXGGGGGXXXGGGG----XXXXGGGGXGXKXXXGGGA 186
G G GGG G G GG GGGG GG A
Sbjct: 673 GGAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGGHHLSHHHGGAA 717
Score = 25.8 bits (54), Expect = 1.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXG 841
G GGG GGG GG G
Sbjct: 294 GVGGGGGGGGGGGGGG 309
Score = 25.8 bits (54), Expect = 1.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXGXXXXXGGGG 187
GGGGG GGG G GG G
Sbjct: 815 GGGGGAGASGGGFLITGDPSDTIGAGGGGAG 845
Score = 25.8 bits (54), Expect = 1.8
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGG-GGXGXKXXXGGGA 186
GG GG G G G GG G GGG+
Sbjct: 842 GGAGGPLRGSSGGAGGGSSGGGGSGGTSGGGS 873
Score = 25.8 bits (54), Expect = 1.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 897 PXXGXGGGXXGGGXXGGXGWXXXGGG 820
P G GG GG GG GGG
Sbjct: 847 PLRGSSGGAGGGSSGGGGSGGTSGGG 872
Score = 25.4 bits (53), Expect = 2.4
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXGXXXXXGGGG 187
G GG G G G G G GGGG
Sbjct: 533 GAGGMAGGGSDGPEYEGAGRGGVGSGIGGGG 563
Score = 25.4 bits (53), Expect = 2.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 276 GGGGXXXGGGGXXXXGGGGXGXXXXXGGGG 187
G GG GG GG G G G GG
Sbjct: 838 GAGGGGAGGPLRGSSGGAGGGSSGGGGSGG 867
Score = 25.0 bits (52), Expect = 3.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 882 GGGXXGGGXXGGXGWXXXGGG 820
GGG GGG GG G GGG
Sbjct: 292 GGGVGGGGGGGGGG--GGGGG 310
Score = 25.0 bits (52), Expect = 3.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 296 GXXXXXGGGGGXXXGGGG 243
G GGGGG GGGG
Sbjct: 292 GGGVGGGGGGGGGGGGGG 309
Score = 25.0 bits (52), Expect = 3.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 296 GXXXXXGGGGGXXXGGGG 243
G GGGGG GGGG
Sbjct: 293 GGVGGGGGGGGGGGGGGG 310
Score = 25.0 bits (52), Expect = 3.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = -3
Query: 888 GXGGGXXGG---GXXGGXGWXXXGGG 820
G GGG GG G GG G GGG
Sbjct: 838 GAGGGGAGGPLRGSSGGAGGGSSGGG 863
Score = 24.6 bits (51), Expect = 4.2
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 276 GGGGXXXGGGGXXXXGGGGXGXXXXXGGGGKKK 178
GG G GGGG GGGG G G +K
Sbjct: 553 GGVGSGIGGGG---GGGGGGRAGGGVGATGAEK 582
Score = 24.6 bits (51), Expect = 4.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXGWXXXGGG 820
G G G GGG GG G GGG
Sbjct: 554 GVGSGIGGGGGGGGGG--RAGGG 574
Score = 24.6 bits (51), Expect = 4.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXG 214
G GGG GGGG G G G
Sbjct: 558 GIGGGGGGGGGGRAGGGVGATG 579
Score = 24.6 bits (51), Expect = 4.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGGGGXG 213
G GGG GGGG G G G
Sbjct: 558 GIGGGGGGGGGGRAGGGVGATG 579
Score = 24.2 bits (50), Expect = 5.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 252 GGGXXXXGGGGXGXXXXXGGGG 187
GGG GGGG G GGGG
Sbjct: 292 GGGVGGGGGGGGG---GGGGGG 310
Score = 24.2 bits (50), Expect = 5.5
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Frame = -3
Query: 279 GGGGGXXXGG--GGXXXXGGGGXGXXXXXGGG 190
GGG G G GG GG G GGG
Sbjct: 841 GGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGG 872
Score = 23.8 bits (49), Expect = 7.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 888 GXGGGXXGGGXXGG 847
G GGG GGG GG
Sbjct: 297 GGGGGGGGGGGGGG 310
Score = 23.8 bits (49), Expect = 7.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 320 PXXXGXXXGXXXXXGGGGGXXXGGGGXXXXGGGG 219
P G G GGGG GGGG GG G
Sbjct: 545 PEYEGAGRGGVGSGIGGGGG--GGGGGRAGGGVG 576
Score = 23.8 bits (49), Expect = 7.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 882 GGGXXGGGXXGGXGWXXXGG 823
GGG GGG G G GG
Sbjct: 672 GGGAVGGGSGAGGGAGSSGG 691
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 882 GGGXXGGGXXGGXGWXXXGGGP 817
GG GGG GG G GP
Sbjct: 293 GGVGGGGGGGGGGGGGGGSAGP 314
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXG 841
G GGG GGG G G
Sbjct: 298 GGGGGGGGGGGGGSAG 313
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 29.5 bits (63), Expect = 0.15
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 827 PXXXQPXPPXXPPPXSPPPXPKXG 898
P P P PPP PPP P G
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAG 600
Score = 28.3 bits (60), Expect = 0.34
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 193 PPXXXXXPXPPPPXXXXPPPPXXXPPPP 276
P P PP PPPP PP P
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSP 597
Score = 27.5 bits (58), Expect = 0.59
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 223 PPPXXXXPPPPXXXPPPPP 279
PPP PPPP PPP P
Sbjct: 581 PPPAP--PPPPPMGPPPSP 597
Score = 27.1 bits (57), Expect = 0.78
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 182 FLPPPPXXXXXPCPPPPXXXXPPPPXXXPPPP 277
F P P P P PPP PPPP
Sbjct: 559 FFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPP 590
Score = 26.6 bits (56), Expect = 1.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 188 PPPPXXXXXPCPPPPXXXXPPP 253
P P P PPPP PPP
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPP 595
Score = 26.2 bits (55), Expect = 1.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 820 PPPAXXPTXPPXXXPPPXP 876
PPPA P PP PPP P
Sbjct: 581 PPPAPPP--PPPMGPPPSP 597
Score = 25.0 bits (52), Expect = 3.1
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 842 PXPPXXPPPXSPPPXPKXG 898
P P PP +PPP P G
Sbjct: 574 PNLPNAQPPPAPPPPPPMG 592
Score = 25.0 bits (52), Expect = 3.1
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 190 PPPXXXXXPXPPPPXXXXPPPPXXXPPPPPXXXXXPXXXPXXXGG 324
PPP P PPPP P P P P P GG
Sbjct: 581 PPPA----PPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGG 621
Score = 24.2 bits (50), Expect = 5.5
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 824 PPXXXQPXPPXXPPPXSPPPXPKXG 898
PP P PP PPP P G
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGG 605
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 214 PXPPPPXXXXPPPPXXXPPP 273
P PPP PP PPP
Sbjct: 532 PPPPPGGAVLNIPPQFLPPP 551
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 28.7 bits (61), Expect = 0.26
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXG 214
GGG G GGGG GGG G
Sbjct: 244 GGGVGGGGGGGGGGGGGGGSAG 265
Score = 28.7 bits (61), Expect = 0.26
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGGGGXG 213
GGG G GGGG GGG G
Sbjct: 244 GGGVGGGGGGGGGGGGGGGSAG 265
Score = 25.8 bits (54), Expect = 1.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXG 841
G GGG GGG GG G
Sbjct: 246 GVGGGGGGGGGGGGGG 261
Score = 25.0 bits (52), Expect = 3.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 882 GGGXXGGGXXGGXGWXXXGGG 820
GGG GGG GG G GGG
Sbjct: 244 GGGVGGGGGGGGGG--GGGGG 262
Score = 25.0 bits (52), Expect = 3.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 296 GXXXXXGGGGGXXXGGGG 243
G GGGGG GGGG
Sbjct: 244 GGGVGGGGGGGGGGGGGG 261
Score = 25.0 bits (52), Expect = 3.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 296 GXXXXXGGGGGXXXGGGG 243
G GGGGG GGGG
Sbjct: 245 GGVGGGGGGGGGGGGGGG 262
Score = 24.2 bits (50), Expect = 5.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 252 GGGXXXXGGGGXGXXXXXGGGG 187
GGG GGGG G GGGG
Sbjct: 244 GGGVGGGGGGGGG---GGGGGG 262
Score = 23.8 bits (49), Expect = 7.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 888 GXGGGXXGGGXXGG 847
G GGG GGG GG
Sbjct: 249 GGGGGGGGGGGGGG 262
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 882 GGGXXGGGXXGGXGWXXXGGGP 817
GG GGG GG G GP
Sbjct: 245 GGVGGGGGGGGGGGGGGGSAGP 266
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXG 841
G GGG GGG G G
Sbjct: 250 GGGGGGGGGGGGGSAG 265
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 27.9 bits (59), Expect = 0.45
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGG 223
GGGGG GGGG G G
Sbjct: 547 GGGGGGGGGGGGGGVIGSG 565
Score = 27.9 bits (59), Expect = 0.45
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGGG 222
GGGGG GGGG G G
Sbjct: 547 GGGGGGGGGGGGGGVIGSG 565
Score = 25.8 bits (54), Expect = 1.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXG 841
G GGG GGG GG G
Sbjct: 545 GVGGGGGGGGGGGGGG 560
Score = 24.6 bits (51), Expect = 4.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXG 214
G G GGGG GGGG G
Sbjct: 539 GPVGPAGVGGGGGGGGGGGGGG 560
Score = 24.6 bits (51), Expect = 4.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGGGGXG 213
G G GGGG GGGG G
Sbjct: 539 GPVGPAGVGGGGGGGGGGGGGG 560
Score = 24.2 bits (50), Expect = 5.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 296 GXXXXXGGGGGXXXGGGGXXXXGGGG 219
G G GGG GGGG GGGG
Sbjct: 539 GPVGPAGVGGGGGGGGGG----GGGG 560
Score = 23.8 bits (49), Expect = 7.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 275 GGGGXXXGGGGXXXXGGGG 219
GGGG GGGG G G
Sbjct: 547 GGGGGGGGGGGGGGVIGSG 565
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 27.9 bits (59), Expect = 0.45
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 220 PPPPXXXXPPPPXXXPPPPPXXXXXPXXXPXXXG 321
PP P PPP PP P P P G
Sbjct: 71 PPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMG 104
Score = 27.1 bits (57), Expect = 0.78
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +2
Query: 734 PXXPXKGXPPPXPNXXXXPXXXXXXXXXGPPPXXXQPXPPXXPPPXSPPPXP 889
P P PPP N P G PP P P PP P P
Sbjct: 71 PPKPNISIPPPTMNMPPRPGMIPGMP--GAPPLLMGPNGPLPPPMMGMRPPP 120
Score = 23.4 bits (48), Expect = 9.6
Identities = 15/65 (23%), Positives = 15/65 (23%)
Frame = +2
Query: 689 PXKXXPXPXXXXXPTPXXPXKGXPPPXPNXXXXPXXXXXXXXXGPPPXXXQPXPPXXPPP 868
P P P P P P P PPP PP P
Sbjct: 66 PFTAGPPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPT 125
Query: 869 XSPPP 883
PP
Sbjct: 126 MGMPP 130
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 25.8 bits (54), Expect = 1.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 252 GGGXXXXGGGGXGXXXXXGGGG 187
GGG GGG G GGGG
Sbjct: 183 GGGELTTGGGTNGCTKAGGGGG 204
Score = 25.4 bits (53), Expect = 2.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 276 GGGGXXXGGGGXXXXGGGGXGXXXXXGGG 190
GGG GGG GG G GGG
Sbjct: 183 GGGELTTGGGTNGCTKAGGGGGGTGTGGG 211
Score = 25.0 bits (52), Expect = 3.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 275 GGGGXXXGGGGXXXXGGGGXGXKXXXGGG 189
GGG GGG GG G GGG
Sbjct: 183 GGGELTTGGGTNGCTKAGGGGGGTGTGGG 211
Score = 23.8 bits (49), Expect = 7.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 308 GXXXGXXXXXGGGGGXXXGGG 246
G G GGGGG GGG
Sbjct: 191 GGTNGCTKAGGGGGGTGTGGG 211
>EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calcium
channel beta subunitprotein.
Length = 466
Score = 25.4 bits (53), Expect = 2.4
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 674 PPRXTPXKXXPXPXXXXXPTPXXPXKGXPPP 766
P R TP P P P+ P + PPP
Sbjct: 427 PVRPTPSVPRPLPSQEASPSGEQPGRMGPPP 457
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 25.4 bits (53), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 279 GGGGGXXXGGGGXXXXGGGGXG 214
GG GG G G GGGG G
Sbjct: 1484 GGYGGSPTKGAGGGGGGGGGKG 1505
Score = 25.4 bits (53), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 278 GGGGGXXXGGGGXXXXGGGGXG 213
GG GG G G GGGG G
Sbjct: 1484 GGYGGSPTKGAGGGGGGGGGKG 1505
Score = 25.4 bits (53), Expect = 2.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 897 PXXGXGGGXXGGGXXGGXG 841
P G GGG GGG G G
Sbjct: 1490 PTKGAGGGGGGGGGKGAAG 1508
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 25.0 bits (52), Expect = 3.1
Identities = 15/62 (24%), Positives = 15/62 (24%)
Frame = +2
Query: 704 PXPXXXXXPTPXXPXKGXPPPXPNXXXXPXXXXXXXXXGPPPXXXQPXPPXXPPPXSPPP 883
P P P P PP P PP P P PP P
Sbjct: 181 PNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGM 240
Query: 884 XP 889
P
Sbjct: 241 QP 242
Score = 24.6 bits (51), Expect = 4.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 888 GXGGGXXGGGXXGGXGW 838
G GGG GGG G W
Sbjct: 529 GGGGGGGGGGREGSQEW 545
Score = 24.2 bits (50), Expect = 5.5
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +2
Query: 188 PPPPXXXXXPCPPPPXXXXPPPPXXXPPPPP 280
PP P PP P P PP P P
Sbjct: 200 PPRTGTPTQPQPPRPGGMYPQPPGVPMPMRP 230
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 24.6 bits (51), Expect = 4.2
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 279 GGGGGXXXGGGG 244
GGGGG GGGG
Sbjct: 14 GGGGGGGGGGGG 25
Score = 24.6 bits (51), Expect = 4.2
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 278 GGGGGXXXGGGG 243
GGGGG GGGG
Sbjct: 14 GGGGGGGGGGGG 25
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.8 bits (49), Expect = 7.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 888 GXGGGXXGGGXXGG 847
G GGG GGG GG
Sbjct: 1714 GSGGGVGGGGDEGG 1727
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 23.8 bits (49), Expect = 7.3
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +1
Query: 319 GGEPXXXXXXXGXXGGGXTKXXKKXXXXRPXKPXXXGG 432
GGE G G G K K+ +P K GG
Sbjct: 916 GGEVGGGGGSGGEEGSGAPKERKRKGEKKPRKSQGGGG 953
Score = 23.4 bits (48), Expect = 9.6
Identities = 13/46 (28%), Positives = 15/46 (32%)
Frame = -1
Query: 296 GXXXXXGGGGGXXXGGGGXXXXGGGGXGXKXXXGGGAKKKXKXXXR 159
G GG GG G G + GGG +K K R
Sbjct: 917 GEVGGGGGSGGEEGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKAR 962
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.4 bits (48), Expect = 9.6
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = -1
Query: 308 GXXXGXXXXXGGGGGXXXGGGGXXXXGGGGXGXKXXXGGGAKK 180
G G G G G G GG G GGG K
Sbjct: 2030 GGGNGNENDDSGDGATGSGDNGSQHGGGSISGGGGTPGGGKSK 2072
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.312 0.151 0.545
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,827
Number of Sequences: 2352
Number of extensions: 15312
Number of successful extensions: 676
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
- SilkBase 1999-2023 -