Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_M09
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   4.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   4.2  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   7.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 367 QFYLSTFLSFLSYFQLILF 311
           Q Y S  L FL+YF  ILF
Sbjct: 74  QRYCSVLLVFLTYFFNILF 92


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 367 QFYLSTFLSFLSYFQLILF 311
           Q Y S  L FL+YF  ILF
Sbjct: 70  QRYCSVLLVFLTYFFNILF 88


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 541 AHLLRIPVHLLLKLYHSGLQFVEVGI 464
           AH    P+  + KL+ SGL+   VG+
Sbjct: 258 AHWAFAPIRWVAKLWDSGLRKPGVGV 283


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 558  IFCN*MVNRLYYLVIFVHVLLTD 626
            +F   M+N LY +VIF+  L  D
Sbjct: 1226 VFTFLMLNSLYVIVIFLLTLKKD 1248


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 558  IFCN*MVNRLYYLVIFVHVLLTD 626
            +F   M+N LY +VIF+  L  D
Sbjct: 1226 VFTFLMLNSLYVIVIFLLTLKKD 1248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,999
Number of Sequences: 336
Number of extensions: 3131
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)