Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_M09
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0372 - 22624556-22624649,22625235-22625335,22626348-226264...    41   0.001
12_01_0611 - 5034481-5034709,5034863-5035020,5035231-5035475,503...    29   3.7  
07_03_0172 + 14697741-14697869,14697878-14697998,14698134-146982...    28   8.5  
01_05_0275 - 20300994-20301150,20301582-20301670,20302779-203029...    28   8.5  

>09_06_0372 -
           22624556-22624649,22625235-22625335,22626348-22626457,
           22626541-22626619,22626709-22626800,22627220-22627289
          Length = 181

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 18/39 (46%), Positives = 30/39 (76%)
 Frame = +3

Query: 696 KKRGEVSAYSVFNENCVSIDGTLKXEQFEKEIRYGAGQY 812
           +++G+VSAYS+FNE+   + GTL  E+ +++IR  AGQ+
Sbjct: 145 RQQGDVSAYSIFNEDFRELPGTLNAERIDRDIR--AGQF 181


>12_01_0611 -
           5034481-5034709,5034863-5035020,5035231-5035475,
           5036686-5036983,5037644-5038482,5039763-5039823
          Length = 609

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +1

Query: 265 LRMEAKLKEYRALRRRKELVENTKEKIRKSKDKIVNFLIPQV 390
           ++ E  L+E RA  R+ ++   + E  R+ K+KI NF+  QV
Sbjct: 505 IKFEKLLQEERAKARQSDVDSGSTEDRRQRKEKIQNFIDCQV 546


>07_03_0172 +
           14697741-14697869,14697878-14697998,14698134-14698226,
           14700888-14700946,14701003-14701599,14702813-14703020,
           14703102-14703178,14703263-14703302,14703413-14703473,
           14704120-14704189,14705014-14705235
          Length = 558

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 271 MEAKLKEYRALRRRKELVENTKEKIRKSKDKIVNFLIPQVFLDMTK 408
           +++ L++YR  R R EL E + EK   SK+ I +  +     D+T+
Sbjct: 423 VKSHLQKYRTARYRPELSEGSSEKKAASKEDIPSIDLKGGNFDLTE 468


>01_05_0275 -
           20300994-20301150,20301582-20301670,20302779-20302937,
           20303015-20303255,20303453-20303569,20304804-20304866,
           20305009-20305118,20306418-20306495
          Length = 337

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/72 (26%), Positives = 35/72 (48%)
 Frame = -1

Query: 517 HLLLKLYHSGLQFVEVGISEVFVLHFQ*AKPLLRFYLWSCLKKLVVSGS*QFYLSTFLSF 338
           H ++K+  SG+ F  VG+S + +      K  ++ +L+    ++    S  + L  FL F
Sbjct: 133 HGIVKI--SGIVFCAVGVSVLALYQGPDLKSFIKHHLFPHTNRVGTHSSRNWILGIFLQF 190

Query: 337 LSYFQLILFGVL 302
           L+     L+ VL
Sbjct: 191 LATLMWALWAVL 202


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,455,271
Number of Sequences: 37544
Number of extensions: 275679
Number of successful extensions: 593
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)