Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_M08
(860 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 85 5e-17
06_01_1181 + 10148653-10149405 68 1e-11
02_05_0591 - 30183105-30183869 65 8e-11
03_04_0055 + 16891212-16891848,16893166-16893206 64 1e-10
05_05_0135 - 22626163-22626198,22626391-22626441,22626516-226266... 64 2e-10
01_06_1252 - 35748000-35748173,35748243-35748375,35749771-357498... 63 2e-10
07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343 61 1e-09
05_07_0196 + 28352320-28352522,28352679-28352808,28353774-283538... 60 2e-09
01_07_0092 - 41021743-41022276 60 2e-09
08_01_0498 - 4327502-4328395 60 3e-09
01_07_0091 - 41013837-41014271 56 3e-08
09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439 52 4e-07
02_05_0592 - 30210219-30210757,30210898-30210919 42 6e-04
06_03_1339 + 29445324-29445395,29445487-29445598,29445673-294457... 30 2.7
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 85.4 bits (202), Expect = 5e-17
Identities = 40/86 (46%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Frame = +1
Query: 160 LTLPXASINKMXKXLVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAE 336
++LP +++ K+ K ++P VRVA ++++L++ CC EFI+L+SSE+NEVC++ +KKTI E
Sbjct: 14 VSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSSESNEVCSREDKKTIAPE 73
Query: 337 HVLTALDRLGFSDYTIEAEAVLKDCK 414
HVL AL LGF +Y E +A + K
Sbjct: 74 HVLRALQDLGFREYIEEVQAAYEHHK 99
>06_01_1181 + 10148653-10149405
Length = 250
Score = 67.7 bits (158), Expect = 1e-11
Identities = 29/81 (35%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +1
Query: 166 LPXASINK-MXKXLVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
+P A++ + M + L P +++ +++E+I C +EFI ++ EAN+ C++ ++KT+ AE +
Sbjct: 36 MPIANVIRIMRRVLPPHAKISDDAKEVIQECVSEFISFVTGEANDRCHREHRKTVTAEDL 95
Query: 343 LTALDRLGFSDYTIEAEAVLK 405
+ A+DRLGF DY A L+
Sbjct: 96 VWAMDRLGFDDYVPPLTAYLR 116
>02_05_0591 - 30183105-30183869
Length = 254
Score = 64.9 bits (151), Expect = 8e-11
Identities = 28/72 (38%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +1
Query: 166 LPXASINKMXKXLVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
+P A++ ++ + ++P+ +++ +++E I C +E+I I+ EANE C + +KTI AE V
Sbjct: 37 MPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDV 96
Query: 343 LTALDRLGFSDY 378
L A+ RLGF DY
Sbjct: 97 LWAMSRLGFDDY 108
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 64.5 bits (150), Expect = 1e-10
Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +1
Query: 166 LPXASINKMXKXLVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
LP A+++++ K +P+ +++ +++E + C +EFI I+ EA++ C + +KTIN + +
Sbjct: 29 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 88
Query: 343 LTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQST 447
L A+ LGF DY + L + + +R ST
Sbjct: 89 LWAMTTLGFEDYVDPLKHYLHKFREIEGERAAAST 123
>05_05_0135 -
22626163-22626198,22626391-22626441,22626516-22626608,
22627249-22627254,22628051-22628180,22628333-22628583
Length = 188
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/72 (38%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +1
Query: 166 LPXASINKMXKXLVPSV-RVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
LP A+I+++ K +P+ ++A +++E + C +EFI I+SEA++ C + +KTIN + +
Sbjct: 43 LPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDL 102
Query: 343 LTALDRLGFSDY 378
L A+ LGF DY
Sbjct: 103 LWAMATLGFEDY 114
>01_06_1252 -
35748000-35748173,35748243-35748375,35749771-35749847,
35750465-35750509,35750584-35750679,35751125-35751130,
35751259-35751388,35751510-35751706
Length = 285
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/72 (38%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +1
Query: 166 LPXASINKMXKXLVPSV-RVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
LP A+I+++ K VP+ ++A +++E + C +EFI ++SEA++ C + +KTIN E +
Sbjct: 25 LPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGEDL 84
Query: 343 LTALDRLGFSDY 378
L A+ LGF +Y
Sbjct: 85 LFAMGTLGFEEY 96
>07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343
Length = 229
Score = 61.3 bits (142), Expect = 1e-09
Identities = 25/72 (34%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 166 LPXASINKMXKXLVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
LP A+++++ K +P+ +++ +++E + C +EFI I+ EA++ C + +KTIN + +
Sbjct: 27 LPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 86
Query: 343 LTALDRLGFSDY 378
L A+ LGF DY
Sbjct: 87 LWAMTTLGFEDY 98
>05_07_0196 +
28352320-28352522,28352679-28352808,28353774-28353851,
28355562-28355664,28356109-28356302,28356501-28356518
Length = 241
Score = 60.5 bits (140), Expect = 2e-09
Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 166 LPXASINKMXKXLVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
LP A+I ++ + VP + ++A +S+E + C +EFI I+SEA++ C + +KTIN + +
Sbjct: 27 LPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKTINGDDL 86
Query: 343 LTALDRLGFSDY 378
+ ++ LGF DY
Sbjct: 87 IWSMGTLGFEDY 98
>01_07_0092 - 41021743-41022276
Length = 177
Score = 60.5 bits (140), Expect = 2e-09
Identities = 24/72 (33%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +1
Query: 166 LPXASINKMXKXLVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
LP A++ ++ K ++P + +++ E++E + C +EFI ++ EA++ C++ +KT+N + V
Sbjct: 39 LPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDV 98
Query: 343 LTALDRLGFSDY 378
A LGF DY
Sbjct: 99 CWAFGALGFDDY 110
>08_01_0498 - 4327502-4328395
Length = 297
Score = 59.7 bits (138), Expect = 3e-09
Identities = 25/72 (34%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +1
Query: 166 LPXASINKMXKXLVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
LP A+++++ K +P+ +++ ES+E + C +EFI ++ EA++ C + +KTIN + +
Sbjct: 63 LPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEASDKCQREKRKTINGDDL 122
Query: 343 LTALDRLGFSDY 378
L A+ LGF Y
Sbjct: 123 LWAMTTLGFEAY 134
>01_07_0091 - 41013837-41014271
Length = 144
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 166 LPXASINKMXKX-LVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
LP A++ ++ K L P +++ ++E I C TEFI ++ EA+E C + +KT+N + V
Sbjct: 9 LPIANVGRIMKDGLPPQAKISKRAKETIQECATEFISFVTGEASERCRRERRKTVNGDDV 68
Query: 343 LTALDRLGFSDY 378
A+ LG Y
Sbjct: 69 CHAMRSLGLDHY 80
>09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439
Length = 167
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/62 (37%), Positives = 40/62 (64%)
Frame = +1
Query: 265 FIHLISSEANEVCNQSNKKTINAEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQS 444
FIH +S+ AN++C +S ++TINA+ VL ALD + F ++ L++ + A RR ++
Sbjct: 76 FIHYLSATANDMCKESKRQTINADDVLKALDEMEFPEFVEPLNTSLQEFRNKNAARRSET 135
Query: 445 TR 450
T+
Sbjct: 136 TQ 137
>02_05_0592 - 30210219-30210757,30210898-30210919
Length = 186
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 166 LPXASINKMXKXLVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
LP A++ ++ K ++P ++ ++ L +C EF+ + EA+E +++T+ E
Sbjct: 34 LPMANLVRLIKKVLPGKAKIGGAAKGLTHDCAVEFVGFVGDEASEKAKAEHRRTVAPEDY 93
Query: 343 LTALDRLGFSDYTIEAEAVL 402
L + LGF Y +A +
Sbjct: 94 LGSFGDLGFDRYVDPMDAYI 113
>06_03_1339 +
29445324-29445395,29445487-29445598,29445673-29445756,
29446156-29446182,29446879-29446966,29447070-29447151,
29447414-29447434,29448412-29448605,29449419-29449560,
29449805-29449889,29450123-29450250,29450940-29451032,
29451095-29451327,29453384-29453564,29454122-29454169
Length = 529
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = +1
Query: 160 LTLPX-ASINKMXKXLVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAE 336
L LP A ++ + LV VR F R L C S+ + +VC + ++
Sbjct: 134 LCLPTEADVDDLILWLVGFVRKIFVLRASNLACELFVAQTDSAGSGDVCLSQDSDDVHIS 193
Query: 337 HVLTALDRL--GFSDYTIEAEAVLKDCKAVAAKRRR 438
+++DRL G DY + C+A R R
Sbjct: 194 ITTSSIDRLVSGLKDYALSHANTSDRCEACYMNRDR 229
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,777,146
Number of Sequences: 37544
Number of extensions: 221144
Number of successful extensions: 464
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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