Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_M08
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF302257-1|AAG15388.1|  183|Drosophila melanogaster NC2beta prot...   188   6e-48
AE014134-2547|AAF53428.1|  183|Drosophila melanogaster CG4185-PA...   188   6e-48
DQ138728-1|ABA86334.1|  169|Drosophila melanogaster CG4185 protein.   187   1e-47
AY094930-1|AAM11283.1|  156|Drosophila melanogaster RH50436p pro...    58   1e-08
AY070968-1|AAL48590.1|  156|Drosophila melanogaster RE06807p pro...    58   1e-08
AE014134-3154|AAF53839.2|  156|Drosophila melanogaster CG10447-P...    58   1e-08

>AF302257-1|AAG15388.1|  183|Drosophila melanogaster NC2beta
           protein.
          Length = 183

 Score =  188 bits (459), Expect = 6e-48
 Identities = 96/130 (73%), Positives = 101/130 (77%)
 Frame = +1

Query: 130 LCPPPSXAXXLTLPXASINKMXKXLVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQ 309
           L PP +    LTLP ASINK+ K LVP+VRVA ESRELILNCC+EFIHLISSEANEVCN 
Sbjct: 8   LLPPSAEDDELTLPRASINKIIKELVPTVRVANESRELILNCCSEFIHLISSEANEVCNM 67

Query: 310 SNKKTINAEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGIPXXXXXX 489
            NKKTINAEHVL AL+RLGF DY  EAEAVL DCK VAAKRRRQSTRLENLGIP      
Sbjct: 68  RNKKTINAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKRRRQSTRLENLGIPEEELLR 127

Query: 490 XXXXXFAKAR 519
                FAKAR
Sbjct: 128 QQQELFAKAR 137


>AE014134-2547|AAF53428.1|  183|Drosophila melanogaster CG4185-PA
           protein.
          Length = 183

 Score =  188 bits (459), Expect = 6e-48
 Identities = 96/130 (73%), Positives = 101/130 (77%)
 Frame = +1

Query: 130 LCPPPSXAXXLTLPXASINKMXKXLVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQ 309
           L PP +    LTLP ASINK+ K LVP+VRVA ESRELILNCC+EFIHLISSEANEVCN 
Sbjct: 8   LLPPSAEDDELTLPRASINKIIKELVPTVRVANESRELILNCCSEFIHLISSEANEVCNM 67

Query: 310 SNKKTINAEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGIPXXXXXX 489
            NKKTINAEHVL AL+RLGF DY  EAEAVL DCK VAAKRRRQSTRLENLGIP      
Sbjct: 68  RNKKTINAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKRRRQSTRLENLGIPEEELLR 127

Query: 490 XXXXXFAKAR 519
                FAKAR
Sbjct: 128 QQQELFAKAR 137


>DQ138728-1|ABA86334.1|  169|Drosophila melanogaster CG4185 protein.
          Length = 169

 Score =  187 bits (456), Expect = 1e-47
 Identities = 95/128 (74%), Positives = 100/128 (78%)
 Frame = +1

Query: 136 PPPSXAXXLTLPXASINKMXKXLVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSN 315
           PP +    LTLP ASINK+ K LVP+VRVA ESRELILNCC+EFIHLISSEANEVCN  N
Sbjct: 2   PPSAEDDELTLPRASINKIIKELVPTVRVANESRELILNCCSEFIHLISSEANEVCNMRN 61

Query: 316 KKTINAEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGIPXXXXXXXX 495
           KKTINAEHVL AL+RLGF DY  EAEAVL DCK VAAKRRRQSTRLENLGIP        
Sbjct: 62  KKTINAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKRRRQSTRLENLGIPEEELLRQQ 121

Query: 496 XXXFAKAR 519
              FAKAR
Sbjct: 122 QELFAKAR 129


>AY094930-1|AAM11283.1|  156|Drosophila melanogaster RH50436p
           protein.
          Length = 156

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +1

Query: 166 LPXASINKMXKXLVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
           LP  +I K+ K  VP + ++A ++RE I  C +EFI  ISSEA E     N+KT+N + +
Sbjct: 43  LPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDL 102

Query: 343 LTALDRLGFSDY 378
           L A   LGF +Y
Sbjct: 103 LVAFSNLGFDNY 114


>AY070968-1|AAL48590.1|  156|Drosophila melanogaster RE06807p
           protein.
          Length = 156

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +1

Query: 166 LPXASINKMXKXLVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
           LP  +I K+ K  VP + ++A ++RE I  C +EFI  ISSEA E     N+KT+N + +
Sbjct: 43  LPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDL 102

Query: 343 LTALDRLGFSDY 378
           L A   LGF +Y
Sbjct: 103 LVAFSNLGFDNY 114


>AE014134-3154|AAF53839.2|  156|Drosophila melanogaster CG10447-PA
           protein.
          Length = 156

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +1

Query: 166 LPXASINKMXKXLVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 342
           LP  +I K+ K  VP + ++A ++RE I  C +EFI  ISSEA E     N+KT+N + +
Sbjct: 43  LPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDL 102

Query: 343 LTALDRLGFSDY 378
           L A   LGF +Y
Sbjct: 103 LVAFSNLGFDNY 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,292,608
Number of Sequences: 53049
Number of extensions: 399629
Number of successful extensions: 993
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)