Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_M06
         (878 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    28   0.43 
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    27   1.00 
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    27   1.00 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   4.0  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    24   7.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   9.3  

>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
 Frame = +2

Query: 344 ISQVVIVQWKKRHYRSYAFFTMIAMWSIPVMISFKNGWWRFVSIWSVFTLLTALVIRKSS 523
           I Q + + +K +    Y  F       + VM+S+ + W    +  +   L    V+  ++
Sbjct: 208 IYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTT 267

Query: 524 IKP-MSATTPRLVYKWFYLIYKVCCFVGVFGYIL 622
           I   + ++ PR+ Y     IY V CFV VF  +L
Sbjct: 268 ISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 301


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 26.6 bits (56), Expect = 1.00
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +2

Query: 392 YAFFTMIAMWSIPVMISFKNGWWRFVSIWS---VFTLLTALVIRKSSIKPMSATTPRLVY 562
           Y  FT++ M+ IP++I        F++I S   +F + T+ V R +  +       RL++
Sbjct: 349 YTTFTLVFMFIIPLLILIGTYLSTFMTISSSEKIFRIDTSAVDRTTYYRRSDTNRQRLIH 408

Query: 563 K 565
           K
Sbjct: 409 K 409


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 26.6 bits (56), Expect = 1.00
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +2

Query: 392 YAFFTMIAMWSIPVMISFKNGWWRFVSIWS---VFTLLTALVIRKSSIKPMSATTPRLVY 562
           Y  FT++ M+ IP++I        F++I S   +F + T+ V R +  +       RL++
Sbjct: 350 YTTFTLVFMFIIPLLILIGTYLSTFMTISSSEKIFRIDTSAVDRTTYYRRSDTNRQRLIH 409

Query: 563 K 565
           K
Sbjct: 410 K 410


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -2

Query: 721 EVQAVKQKQYSYVHPDLGLLSEHQVDAEHCKHH 623
           ++  +   Q+ + HP L  + +H     H  HH
Sbjct: 112 KINLLNHHQHHHQHPHLPHVQQHHPSVHHPAHH 144


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +2

Query: 275 HELHKGHESMHTTMVLILIG-ALVISQVVIVQW--KKRHYRS 391
           + L++  +  +   V++++  +LVISQ+V ++W   KR  R+
Sbjct: 99  YALYERQKFAYFAAVIVIVSFSLVISQIVSIRWYLNKRKIRN 140


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 475 N*NKSPPTVFKAYHDWDGPHGDHC 404
           N N++     K  H+  GPH D C
Sbjct: 843 NCNRTTGECLKCIHNTAGPHCDQC 866


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,824
Number of Sequences: 2352
Number of extensions: 17654
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)