Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_M05
(869 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 80 2e-15
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 78 1e-14
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 58 7e-09
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 55 6e-08
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 54 1e-07
09_04_0287 - 16407324-16407551,16407647-16407748,16407824-164079... 51 1e-06
03_05_0952 + 29103879-29103983,29104103-29104600,29104693-291047... 51 1e-06
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 50 2e-06
03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101... 50 2e-06
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 45 9e-05
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 40 0.003
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 34 0.13
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 33 0.22
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 33 0.30
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 30 2.1
05_01_0143 - 944169-947273 29 6.4
04_04_1704 - 35481041-35481461,35481682-35481810,35482291-354823... 29 6.4
03_01_0013 - 105281-105552,105762-105838,105839-106524,106655-10... 28 8.5
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 80.2 bits (189), Expect = 2e-15
Identities = 52/121 (42%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Frame = +2
Query: 425 RFDFLLKQTEIFSHFMTNTXXXXXXXXXXXXXXXXXXXXDTEPDGPGDHRHRKTEQEEDG 604
R +LL+QTEIF+HF + +P G G H + TE+EED
Sbjct: 160 RLKYLLQQTEIFAHFAKGNQSK-----------------EKKPRGRGRHASKMTEEEEDE 202
Query: 605 ELLAETNSKQKTI--FRFEASPHYIKNGEMRDYQVRGLNWMISLYENGINGILADENGSX 778
E L E R + P IK G+MRDYQ+ GLNW+I LYENGINGILADE G
Sbjct: 203 EYLKEEEDALAGSGGTRLLSQPSCIK-GKMRDYQLAGLNWLIRLYENGINGILADEMGLG 261
Query: 779 K 781
K
Sbjct: 262 K 262
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +3
Query: 768 MGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKS 866
MGL KTLQTISLLGY+ + + GPH+ + PKS
Sbjct: 258 MGLGKTLQTISLLGYLHEFRGITGPHMVVAPKS 290
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 77.8 bits (183), Expect = 1e-14
Identities = 51/121 (42%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +2
Query: 425 RFDFLLKQTEIFSHFMTNTXXXXXXXXXXXXXXXXXXXXDTEPDGPGDHRHRKTEQEEDG 604
R +LL+QTEIF+HF + + G G H + TE+EED
Sbjct: 214 RLKYLLQQTEIFAHFAKGNQST-----------------EKKSRGRGRHASKMTEEEEDE 256
Query: 605 ELLAETNSKQKTI--FRFEASPHYIKNGEMRDYQVRGLNWMISLYENGINGILADENGSX 778
E L E R + P IK G+MRDYQ+ GLNW+I LYENGINGILADE G
Sbjct: 257 EYLKEEEDALDGAGGTRLVSQPSCIK-GKMRDYQLAGLNWLIRLYENGINGILADEMGLG 315
Query: 779 K 781
K
Sbjct: 316 K 316
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +3
Query: 768 MGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKS 866
MGL KTLQTISLLGY+ + + GPH+ + PKS
Sbjct: 312 MGLGKTLQTISLLGYLHEFRGITGPHMVVAPKS 344
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 58.4 bits (135), Expect = 7e-09
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +2
Query: 662 PHYIKNGEMRDYQVRGLNWMISLYENGINGILADENGSXK 781
P Y++ G++R+YQ+ GL W++SLY N +NGILADE G K
Sbjct: 1020 PSYLQGGKLREYQMNGLRWLVSLYNNNLNGILADEMGLGK 1059
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 768 MGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKSL 869
MGL KT+Q ISLL Y+ KN GP + +VP S+
Sbjct: 1055 MGLGKTVQVISLLCYLMETKNDRGPFLVVVPSSV 1088
>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 55.2 bits (127), Expect = 6e-08
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +2
Query: 647 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGINGILADENGSXK 781
R P ++ G +RDYQ+ GL WM+SLY N +NGILADE G K
Sbjct: 949 RVTRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGK 993
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 768 MGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKSL 869
MGL KT+Q +SL+ Y+ K GPH+ IVP ++
Sbjct: 989 MGLGKTVQVMSLIAYLMEFKGNYGPHLIIVPNAV 1022
>05_01_0318 -
2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 54.4 bits (125), Expect = 1e-07
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2
Query: 662 PHYIKNGEMRDYQVRGLNWMISLYENGINGILADENGSXK 781
P ++ GE+R YQ+ GL WM+SL+ N +NGILADE G K
Sbjct: 457 PSALEGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGK 496
Score = 44.8 bits (101), Expect = 9e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 768 MGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKSL 869
MGL KT+QTI+L+ Y+ K V GPH+ I PK++
Sbjct: 492 MGLGKTIQTIALIAYLLEKKEVTGPHLIIAPKAV 525
>09_04_0287 -
16407324-16407551,16407647-16407748,16407824-16407922,
16408213-16408332,16408513-16408632,16408740-16408834,
16409109-16409365,16410134-16410309,16410401-16410587,
16410656-16411002,16411722-16411823,16411917-16412414,
16412520-16412624
Length = 811
Score = 50.8 bits (116), Expect = 1e-06
Identities = 18/34 (52%), Positives = 29/34 (85%)
Frame = +2
Query: 680 GEMRDYQVRGLNWMISLYENGINGILADENGSXK 781
G+++ YQ++G+ W+ISL++NG+NGILAD+ G K
Sbjct: 280 GKLKSYQIKGVKWLISLWQNGLNGILADQMGLGK 313
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 765 RMGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKS 866
+MGL KT+QTI L ++K K + GP++ I P S
Sbjct: 308 QMGLGKTIQTIGFLAHLK-GKGLDGPYLIIAPLS 340
>03_05_0952 +
29103879-29103983,29104103-29104600,29104693-29104794,
29105552-29105898,29105967-29106153,29106242-29106417,
29106976-29107065,29107066-29107322,29107593-29107687,
29107801-29107920,29108111-29108230,29108410-29108508,
29108588-29108689,29108884-29109111
Length = 841
Score = 50.8 bits (116), Expect = 1e-06
Identities = 18/34 (52%), Positives = 29/34 (85%)
Frame = +2
Query: 680 GEMRDYQVRGLNWMISLYENGINGILADENGSXK 781
G+++ YQ++G+ W+ISL++NG+NGILAD+ G K
Sbjct: 280 GKLKSYQIKGVKWLISLWQNGLNGILADQMGLGK 313
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 765 RMGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKS 866
+MGL KT+QTI L ++K K + GP++ I P S
Sbjct: 308 QMGLGKTIQTIGFLAHLK-GKGLDGPYLIIAPLS 340
>07_03_1567 -
27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 554 DGPGDHRHRKTEQEEDGELLAETNSKQK-TIFRFEASPHYIKNGEMRDYQVRGLNWMISL 730
D +++ R+ G+ + K K ++ R + P ++K G++RDYQ+ GLN++++
Sbjct: 552 DAIDEYKAREAATSILGKTVDFQRKKSKASLRRLDDQPEWLKGGKLRDYQLEGLNFLVNG 611
Query: 731 YENGINGILADENGSXK 781
+ N N ILADE G K
Sbjct: 612 WRNDTNVILADEMGLGK 628
Score = 38.7 bits (86), Expect = 0.006
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +3
Query: 768 MGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKS 866
MGL KT+Q++S+LG++ + + + GP + +VP S
Sbjct: 624 MGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLS 656
>03_02_1012 +
13207907-13207990,13209196-13209280,13209402-13210186,
13210262-13210462,13210580-13210690,13211105-13211487,
13211594-13211702,13211786-13211866,13212088-13212156,
13212379-13212467,13212619-13212780,13212859-13212916,
13213143-13213373,13213516-13213662,13213779-13214333,
13214562-13214819,13215096-13215203,13215760-13215854,
13215946-13216102,13216466-13216666,13217542-13217670,
13218292-13218567
Length = 1457
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +2
Query: 659 SPHYIKNGEMRDYQVRGLNWMISLYENGINGILADENGSXK 781
+P K G +++YQ++GL W+++ YE G+NGILADE G K
Sbjct: 561 TPELFK-GALKEYQLKGLQWLVNCYEQGLNGILADEMGLGK 600
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 699 KLEGLTG*YHCMKMVLMEFWLMRMGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKSL 869
+L+GL +C + L MGL KT+Q ++ L ++ KN+ GP + + P S+
Sbjct: 573 QLKGLQWLVNCYEQGLNGILADEMGLGKTVQAMAFLAHLAEDKNIWGPFLVVAPASV 629
Score = 32.3 bits (70), Expect = 0.52
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 416 RSKRFDFLLKQTEIFSHFMTN 478
+ +R +FLL QTE++SHFM N
Sbjct: 449 QQQRLNFLLSQTELYSHFMQN 469
>02_05_0366 -
28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 44.8 bits (101), Expect = 9e-05
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 662 PHYIKNGEMRDYQVRGLNWMISLYENGINGILADENGSXKNFANNFSTGIYETFXKRSWS 841
P +K+ +R+YQ GL+W++++YE +NGILADE G K S + K W
Sbjct: 661 PFLLKHS-LREYQHIGLDWLVAMYEKRLNGILADEMGLGKTIM-TISLLAHLACEKGIWG 718
Query: 842 SH 847
H
Sbjct: 719 PH 720
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 768 MGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKSL 869
MGL KT+ TISLL ++ K + GPH+ +VP S+
Sbjct: 695 MGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSV 728
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 768 MGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKSL 869
MGL KT+Q ++ L ++H N PGPH+ + P S+
Sbjct: 353 MGLGKTVQAVTYLTLLRHLYNDPGPHLIVCPASV 386
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 686 MRDYQVRGLNWMISLYENGING-ILADENGSXK 781
++ YQ+ G+N+++ L+ I G ILADE G K
Sbjct: 325 LKPYQLVGVNFLLLLHRKNIGGAILADEMGLGK 357
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 680 GEMRDYQVRGLNWMISLYENGINGILADENGSXK 781
G + DYQ++GL W+I ++ + ILADE G K
Sbjct: 532 GALYDYQLQGLQWLIDNFKTRRSVILADEMGLGK 565
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 626 SKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYENGINGILADENGSXK 781
S + I +++ SP ++ G + YQ+ GLN++ + + IL DE G K
Sbjct: 215 SVTREIRQYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGK 266
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 723 YHCMKMVLMEFWLMRMGLXKTLQTISLLGYMKHXKNVPGPHIXIVPKS 866
YH +++L + MGL KT+Q+I+ LG + K GPH+ + P S
Sbjct: 251 YHNKRVILGD----EMGLGKTIQSIAFLGSLFVDK--LGPHLVVAPLS 292
>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 33.1 bits (72), Expect = 0.30
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 683 EMRDYQVRGLNWMISLYENGINGILADENGSXK 781
E+R YQ G+NW+ L ++GIL D+ G K
Sbjct: 1801 ELRRYQQEGINWLAFLRRFKLHGILCDDMGLGK 1833
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 662 PHYIKNGEMRDYQVRGLNWMISLYENGINGILADENGSXK 781
P ++ G + +Q+ LNW+ + N ILADE G K
Sbjct: 599 PKELQGGMLFPHQLEALNWLRKCWYKSKNVILADEMGLGK 638
>05_01_0143 - 944169-947273
Length = 1034
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Frame = +2
Query: 560 PGDHRHRKTEQEED----GELLAETNSKQK 637
PGDH +K E E+D E ++E NS+QK
Sbjct: 574 PGDHNAKKEENEQDLSISDESISEGNSEQK 603
>04_04_1704 -
35481041-35481461,35481682-35481810,35482291-35482397,
35482515-35482583,35482825-35482936,35483013-35483131,
35483211-35483291,35483629-35483700,35484039-35484239,
35484442-35484528,35485284-35485523,35485991-35486455,
35487434-35487556,35487643-35487769,35487851-35487919,
35488061-35488189,35488628-35488722,35488808-35488876,
35489332-35489443,35489545-35489663,35489753-35489833,
35490898-35490969,35491052-35491267,35491524-35491601,
35491694-35491831,35492403-35492414,35492639-35492872,
35493076-35493130,35493222-35493352,35493813-35494546,
35494613-35494820
Length = 1634
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 695 YQVRGLNWMISLYENGINGILADENGSXKNF-ANNFSTGIYET 820
+Q GL W+ L+ G GIL D+ G K + F G++ +
Sbjct: 283 HQREGLRWLWVLHCRGTGGILGDDMGLGKTMQVSAFLAGLFHS 325
>03_01_0013 -
105281-105552,105762-105838,105839-106524,106655-106738,
106914-107114,107202-107309,107766-107855,108505-108551,
109096-109276,110010-110135,110220-110386,110877-111072
Length = 744
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 683 EMRDYQVRGLNWMISLYENGINGIL 757
E++ +QV G+ W+I Y+ G+N +L
Sbjct: 41 ELKPHQVDGVAWLIRRYQLGVNVLL 65
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,521,365
Number of Sequences: 37544
Number of extensions: 393603
Number of successful extensions: 1019
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -