Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_M04
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 94 1e-19
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 94 1e-19
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 72 6e-13
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 72 6e-13
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 71 1e-12
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 66 4e-11
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 66 4e-11
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 66 4e-11
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 66 4e-11
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 66 4e-11
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 66 4e-11
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 66 4e-11
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 64 2e-10
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 62 7e-10
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 61 1e-09
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 57 1e-08
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 57 2e-08
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 56 3e-08
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 56 3e-08
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 53 3e-07
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 52 5e-07
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 52 5e-07
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 52 5e-07
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 52 7e-07
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 52 7e-07
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 52 7e-07
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 52 7e-07
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 51 9e-07
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 51 9e-07
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 51 1e-06
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 51 1e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 50 3e-06
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 48 7e-06
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 48 7e-06
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 48 7e-06
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 46 3e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 46 3e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 44 1e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 44 1e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 44 2e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 43 3e-04
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 42 8e-04
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 41 0.001
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 41 0.001
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 41 0.001
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 40 0.002
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 40 0.002
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 0.003
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 40 0.003
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 40 0.003
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 39 0.004
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 39 0.004
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 39 0.004
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 38 0.007
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 38 0.007
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 38 0.007
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 38 0.007
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 38 0.007
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 38 0.009
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 37 0.016
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 37 0.016
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 36 0.038
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 36 0.050
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 36 0.050
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 35 0.066
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.066
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 35 0.066
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 35 0.066
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.066
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.087
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 35 0.087
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 35 0.087
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 35 0.087
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 33 0.20
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 33 0.35
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.35
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.35
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.47
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.62
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.62
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 32 0.62
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 32 0.62
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 32 0.62
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.62
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.62
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 32 0.62
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 31 0.81
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 31 0.81
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 31 0.81
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.9
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 30 1.9
U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 1.9
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 30 1.9
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 30 1.9
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 30 1.9
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical pr... 30 2.5
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 30 2.5
CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical ... 30 2.5
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.5
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 30 2.5
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 30 2.5
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 30 2.5
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 30 2.5
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 29 3.3
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 29 3.3
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 3.3
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 29 5.7
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 29 5.7
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 29 5.7
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical ... 29 5.7
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 5.7
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 28 7.6
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 28 7.6
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 7.6
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 28 7.6
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 28 7.6
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 7.6
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 94.3 bits (224), Expect = 1e-19
Identities = 42/100 (42%), Positives = 66/100 (66%)
Frame = +3
Query: 429 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVD 608
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +D
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 609 GQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 728
G+ + ++ STS++R PGM P +C+RC H + +CP+
Sbjct: 62 GKVVNIKKSTSKLRPTPGM--PNRCFRCQSDEHRTPQCPQ 99
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 374
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 375 QAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPE 476
+ + I+ + S+ P+ +D+ R P+
Sbjct: 63 KVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 94.3 bits (224), Expect = 1e-19
Identities = 42/100 (42%), Positives = 66/100 (66%)
Frame = +3
Query: 429 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVD 608
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +D
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 609 GQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 728
G+ + ++ STS++R PGM P +C+RC H + +CP+
Sbjct: 62 GKVVNIKKSTSKLRPTPGM--PNRCFRCQSDEHRTPQCPQ 99
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 374
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 375 QAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPE 476
+ + I+ + S+ P+ +D+ R P+
Sbjct: 63 KVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 71.7 bits (168), Expect = 6e-13
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Frame = +3
Query: 174 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 332
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 51 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 110
Query: 333 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELF 491
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D + +LF
Sbjct: 111 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLF 170
Query: 492 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 632
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 171 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 223
Score = 50.4 bits (115), Expect = 2e-06
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Frame = +3
Query: 339 AIQNLNGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 515
A+ +N E +HG+ ++I ++ A + IF+ NL + + F FG ++
Sbjct: 26 AMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILS 85
Query: 516 CDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDP 674
C + + YGFVH + +AI+++NGM++ G+ + V R ++ +G+
Sbjct: 86 CKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGET 145
Query: 675 EQ----CYRCGRGGHWSKE 719
+ Y G H++KE
Sbjct: 146 AKQFTNVYVKNFGDHYNKE 164
Score = 50.4 bits (115), Expect = 2e-06
Identities = 34/185 (18%), Positives = 77/185 (41%), Gaps = 32/185 (17%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 359
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 211
Query: 360 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 482
+ G +K+ +++K ++V NL + ++
Sbjct: 212 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 271
Query: 483 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 641
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 272 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQR 331
Query: 642 RVRQR 656
+ +R
Sbjct: 332 KEDRR 336
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 71.7 bits (168), Expect = 6e-13
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Frame = +3
Query: 174 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 332
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 333 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELF 491
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D + +LF
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLF 233
Query: 492 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 632
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 234 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 286
Score = 59.3 bits (137), Expect = 4e-09
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 20/194 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 353
+++G+L E+ L F G V+ + R+ Y +V+ + A+ +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 354 NGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV- 527
N E +HG+ ++I ++ A + IF+ NL + + F FG ++ C +
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 528 ------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQ--- 680
+ YGFVH + +AI+++NGM++ G+ + V R ++ +G+ +
Sbjct: 154 DEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFT 213
Query: 681 -CYRCGRGGHWSKE 719
Y G H++KE
Sbjct: 214 NVYVKNFGDHYNKE 227
Score = 50.4 bits (115), Expect = 2e-06
Identities = 34/185 (18%), Positives = 77/185 (41%), Gaps = 32/185 (17%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 359
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 360 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 482
+ G +K+ +++K ++V NL + ++
Sbjct: 275 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 334
Query: 483 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 641
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 335 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQR 394
Query: 642 RVRQR 656
+ +R
Sbjct: 395 KEDRR 399
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 70.5 bits (165), Expect = 1e-12
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Frame = +3
Query: 174 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 332
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 333 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELF 491
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D + ++F
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVF 233
Query: 492 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 632
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 234 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 286
Score = 59.3 bits (137), Expect = 4e-09
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 20/194 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 353
+++G+L E+ L F G V+ + R+ Y +V+ + A+ +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 354 NGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV- 527
N E +HG+ ++I ++ A + IF+ NL + + F FG ++ C +
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 528 ------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQ--- 680
+ YGFVH + +AI+++NGM++ G+ + V R ++ +G+ +
Sbjct: 154 DEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFT 213
Query: 681 -CYRCGRGGHWSKE 719
Y G H++KE
Sbjct: 214 NVYVKNFGDHYNKE 227
Score = 48.8 bits (111), Expect = 5e-06
Identities = 33/185 (17%), Positives = 76/185 (41%), Gaps = 32/185 (17%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 359
+++ N D + L +F K+G + C+++ + +GFV N + A+Q L+
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 360 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 482
+ G +K+ +++K ++V NL + ++
Sbjct: 275 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 334
Query: 483 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 641
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V +
Sbjct: 335 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIGQR 394
Query: 642 RVRQR 656
+ +R
Sbjct: 395 KEDRR 399
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 67.3 bits (157), Expect = 1e-11
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 25/181 (13%)
Frame = +3
Query: 192 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQ 347
F +F+G+LS + L+ F K+G V E ++R+ YGFV N+Q AI
Sbjct: 135 FHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIA 194
Query: 348 NLNGELVHGQAIKIEAAKSR---------------KAPSTPTTKIFVGNLTDKTRAPEVR 482
+NG+ + +A++ A + + T ++VGN++ +T ++R
Sbjct: 195 GMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLR 254
Query: 483 ELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 656
+LF +G + E I + Y FV + AI E+NG + G +V+ S R +
Sbjct: 255 DLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAGN--QVRCSWGRTQAV 312
Query: 657 P 659
P
Sbjct: 313 P 313
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVGREAIQNLNGELVH 371
+++GN+S +TT+ADLR LF YG + E I + Y FV E ++ +AI +NG+ +
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMA 298
Query: 372 GQAIKIEAAKSRKAPS 419
G ++ +++ P+
Sbjct: 299 GNQVRCSWGRTQAVPN 314
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 159 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 305
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 306 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 485
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 486 LFQKFGTVVECDIVRN 533
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 390 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 533
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 353
+FI +L ++DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 354 NGELVHGQAIKIEAAKSRKAP 416
NG + + +K++ R P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 534 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 644
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 159 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 305
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 306 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 485
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 486 LFQKFGTVVECDIVRN 533
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 390 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 533
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 353
+FI +L ++DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 354 NGELVHGQAIKIEAAKSRKAP 416
NG + + +K++ R P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 534 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 644
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 159 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 305
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 306 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 485
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 486 LFQKFGTVVECDIVRN 533
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 390 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 533
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 353
+FI +L ++DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 430 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 489
Query: 354 NGELVHGQAIKIEAAKSRKAP 416
NG + + +K++ R P
Sbjct: 490 NGFQIGSKRLKVQLKVDRGNP 510
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 534 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 644
+GFV + +AI +NG + + +KVQL R
Sbjct: 471 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 507
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 159 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 305
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 306 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 485
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 486 LFQKFGTVVECDIVRN 533
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 390 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 533
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 159 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 305
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 306 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 485
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 486 LFQKFGTVVECDIVRN 533
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 390 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 533
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 159 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 305
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 306 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 485
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 486 LFQKFGTVVECDIVRN 533
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 390 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 533
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 159 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 305
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 306 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 485
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 486 LFQKFGTVVECDIVRN 533
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 390 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 533
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 353
+FI +L ++DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 354 NGELVHGQAIKIEAAKSRKAP 416
NG + + +K++ R P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 534 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 644
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 63.7 bits (148), Expect = 2e-10
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----YGFVHMENEQVGREAIQNLNGE 362
+++GNL TE + LF + G+V + ++ + Y FV + +A+Q +N
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKR 107
Query: 363 LVHGQAIKIEAA-----KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 527
L+ + +K+ A + K +T +FVG+L+ + ++RE FQ FG V + ++
Sbjct: 108 LLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVI 167
Query: 528 RN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 644
R+ YGFV + AI+++NG + + ++ +T +
Sbjct: 168 RDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
Score = 58.4 bits (135), Expect = 6e-09
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Frame = +3
Query: 168 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENE 323
SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 127 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 186
Query: 324 QVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFVG 446
+ AI+ +NG+ + + I+ A + S T ++VG
Sbjct: 187 EEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVG 246
Query: 447 NLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 614
N+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 247 NIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 303
Score = 32.3 bits (70), Expect = 0.47
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = +3
Query: 366 VHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---- 533
+H + + E P T ++VGNL + LF + G+V + ++ +
Sbjct: 26 MHSKLAEREGFHLGNGSDEPRT-LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSND 84
Query: 534 -YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 656
Y FV G + A++ +N ++ + MKV + +Q+
Sbjct: 85 PYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQQ 126
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 61.7 bits (143), Expect = 7e-10
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----YGFVHMENEQVGREAIQNLNGE 362
+F+ NL T+ L LF + G V++ I+ Y FV + A+Q+ NG
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHNGR 101
Query: 363 LVHGQAIKIEAAKSRKAP----STPTTK----IFVGNLTDKTRAPEVRELFQKFGTVVEC 518
+ + + + A + P S P T +FVG+L + + ++RE F KFG V E
Sbjct: 102 ELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEA 161
Query: 519 DIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDP 674
I+R+ YGFV D AI E+NG + + ++ +T + + G
Sbjct: 162 KIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGGD 221
Query: 675 EQCYRCGRGG 704
R G GG
Sbjct: 222 RGDRRGGGGG 231
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 168 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENE 323
SK + F +F+G+L + LR F K+G V E I+R+ YGFV
Sbjct: 124 SKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRR 183
Query: 324 QVGREAIQNLNGELVHGQAIK 386
+ AI +NG + + I+
Sbjct: 184 EDAERAIDEMNGAWLGRRTIR 204
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 60.9 bits (141), Expect = 1e-09
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 353
++IG+L +EA L F G V+ + R+ Y +V+ + A+ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 354 NGELVHGQAIKIE-AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV- 527
N E++HG+ ++I + + A IF+ NL V + F FG ++ C +
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 528 ------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGD 671
+ YGFVH + AI+++NGM++ + + V R ++ +G+
Sbjct: 179 DDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGE 232
Score = 54.8 bits (126), Expect = 8e-08
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 21/187 (11%)
Frame = +3
Query: 159 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHME 317
+P ++ G G IFI NL + F +G ++ C + + YGFVH E
Sbjct: 136 DPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Query: 318 NEQVGREAIQNLNGELVHGQAIKI-------EAAKSRKAPSTPTTKIFVGNLTDKTRAPE 476
E + AI+ +NG L+ + + + + K T +FV N + +
Sbjct: 194 TEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEK 253
Query: 477 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 635
+ +F KFG + ++ + +GFV A+++LN +++G K LS
Sbjct: 254 LSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCK--LS 311
Query: 636 TSRVRQR 656
R +++
Sbjct: 312 VCRAQKK 318
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 60.9 bits (141), Expect = 1e-09
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 353
++IG+L +EA L F G V+ + R+ Y +V+ + A+ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 354 NGELVHGQAIKIE-AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV- 527
N E++HG+ ++I + + A IF+ NL V + F FG ++ C +
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 528 ------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGD 671
+ YGFVH + AI+++NGM++ + + V R ++ +G+
Sbjct: 179 DDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGE 232
Score = 54.8 bits (126), Expect = 8e-08
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 21/187 (11%)
Frame = +3
Query: 159 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHME 317
+P ++ G G IFI NL + F +G ++ C + + YGFVH E
Sbjct: 136 DPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Query: 318 NEQVGREAIQNLNGELVHGQAIKI-------EAAKSRKAPSTPTTKIFVGNLTDKTRAPE 476
E + AI+ +NG L+ + + + + K T +FV N + +
Sbjct: 194 TEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEK 253
Query: 477 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 635
+ +F KFG + ++ + +GFV A+++LN +++G K LS
Sbjct: 254 LSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCK--LS 311
Query: 636 TSRVRQR 656
R +++
Sbjct: 312 VCRAQKK 318
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 58.4 bits (135), Expect = 6e-09
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Frame = +3
Query: 168 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENE 323
SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 14 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 73
Query: 324 QVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFVG 446
+ AI+ +NG+ + + I+ A + S T ++VG
Sbjct: 74 EEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVG 133
Query: 447 NLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 614
N+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 134 NIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 190
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +3
Query: 408 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 563
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 15 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74
Query: 564 DVNDAIKELNGMMVDGQPMKVQLSTSR 644
+ AI+++NG + + ++ +T +
Sbjct: 75 EAERAIEQMNGQWLGRRTIRTNWATRK 101
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 58.4 bits (135), Expect = 6e-09
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Frame = +3
Query: 168 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENE 323
SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 24 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 83
Query: 324 QVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFVG 446
+ AI+ +NG+ + + I+ A + S T ++VG
Sbjct: 84 EEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVG 143
Query: 447 NLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 614
N+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 144 NIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 200
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +3
Query: 408 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 563
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 25 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84
Query: 564 DVNDAIKELNGMMVDGQPMKVQLSTSR 644
+ AI+++NG + + ++ +T +
Sbjct: 85 EAERAIEQMNGQWLGRRTIRTNWATRK 111
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 58.4 bits (135), Expect = 6e-09
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Frame = +3
Query: 168 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENE 323
SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 95 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 154
Query: 324 QVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFVG 446
+ AI+ +NG+ + + I+ A + S T ++VG
Sbjct: 155 EEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVG 214
Query: 447 NLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 614
N+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 215 NIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 271
Score = 42.3 bits (95), Expect = 4e-04
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 377
+++GNL TE + LF + G+V + ++ F M+ +N + GQ
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVI----FDEMK-----------VNWAVEPGQ 92
Query: 378 AIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------- 533
+ K +T +FVG+L+ + ++RE FQ FG V + ++R+
Sbjct: 93 -------QQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 145
Query: 534 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 644
YGFV + AI+++NG + + ++ +T +
Sbjct: 146 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 182
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGMM 602
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 603 VDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGRDP 782
+ G +V+LST + R G G GRGG P R+ R R GRD
Sbjct: 64 ICGVRARVELSTGQRRGGGGRGGGFG----GRGGGGRDRSPYRGDRGRSRSRSRDRGRDR 119
Query: 783 TLRRRRHPS 809
+ R R S
Sbjct: 120 SRDRSRDRS 128
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 56.8 bits (131), Expect = 2e-08
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Frame = +3
Query: 180 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGR 335
G + I L T+ ++R LF G + C +VR+ YGFV+ E+
Sbjct: 38 GESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDAL 97
Query: 336 EAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 515
A+ + NG + + IK+ A+ + ++V + E+ +F+ FG ++
Sbjct: 98 RAVSSFNGLRLQNKTIKVSYARPSN-DQIKGSNLYVSGIPKSMTLHELESIFRPFGQIIT 156
Query: 516 CDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGD 671
I+ + GFV D + + AIK LNG + G ++ T + P +
Sbjct: 157 SRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPSGCSEQI---TVKFANNPASNN 213
Query: 672 PE 677
P+
Sbjct: 214 PK 215
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +3
Query: 183 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREA 341
T + +F+ NLS T + L LF ++G +V I+R+ Y FV M N A
Sbjct: 371 TAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNA 430
Query: 342 IQNLNGELVHGQAIKI 389
+ +LNG + G+ +++
Sbjct: 431 MLSLNGTNLAGKTLQV 446
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Frame = +3
Query: 357 GELVHGQAIKIEAAKSRKAPSTPTTK--IFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 530
G H Q + A+ + P + T +FV NL+ T + +LF +FG +V I+R
Sbjct: 348 GLAAHAQLSALSASVAATLPPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILR 407
Query: 531 N-------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 641
+ Y FV + + +A+ LNG + G+ ++V +S
Sbjct: 408 DLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVFKSS 451
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Frame = +3
Query: 324 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 503
Q G+ + G A+ + P P ++ V N+ + R P+++ +F+KFG
Sbjct: 119 QQGQPVVATTAGSTNGSAAVTQPDPSTSSGPDGPK-RLHVSNIPFRFRDPDLKTMFEKFG 177
Query: 504 TVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 656
V + +I+ N +GFV ++ D A +EL+G M++G+ ++V +T+RV +
Sbjct: 178 VVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSK 234
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +3
Query: 186 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 347
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 348 NLNGELVHGQAIKIEAAKSR 407
L+G ++ G+ I++ A +R
Sbjct: 211 ELHGSMIEGRKIEVNCATAR 230
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Frame = +3
Query: 324 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 503
Q G+ + G A+ + P P ++ V N+ + R P+++ +F+KFG
Sbjct: 119 QQGQPVVATTAGSTNGSAAVTQPDPSTSSGPDGPK-RLHVSNIPFRFRDPDLKTMFEKFG 177
Query: 504 TVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 656
V + +I+ N +GFV ++ D A +EL+G M++G+ ++V +T+RV +
Sbjct: 178 VVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSK 234
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +3
Query: 186 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 347
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 348 NLNGELVHGQAIKIEAAKSR 407
L+G ++ G+ I++ A +R
Sbjct: 211 ELHGSMIEGRKIEVNCATAR 230
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 52.8 bits (121), Expect = 3e-07
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 20/186 (10%)
Frame = +3
Query: 177 PGTGTFK-IFIGNLSDKTTEADLRPLFE-----KYGTVVECDIV-RNYGFVHMENEQVGR 335
PGT + IF+ NL TTE ++R E ++ D+V R + +V MEN+Q +
Sbjct: 587 PGTEDARTIFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQ 646
Query: 336 EAIQNLNGELVHGQAIKIEAAKSRK------APSTPTTKIFVGNLTDKTRAPEVRELFQK 497
+A+ + V G+ + I A K + + +K+FV N+ + E++ LF K
Sbjct: 647 QALLK-DRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSK 705
Query: 498 FGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 656
FGTV V + FV D + + +M+ + ++V LS V++
Sbjct: 706 FGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALSNPPVKKD 765
Query: 657 PGMGDP 674
G P
Sbjct: 766 KSHGKP 771
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 52.0 bits (119), Expect = 5e-07
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 183 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGREAIQNLNG 359
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + ++G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDG 172
Query: 360 ELVHGQAIKIEAA 398
++HG+ +++ A
Sbjct: 173 RIIHGRQVRVRFA 185
Score = 48.0 bits (109), Expect = 9e-06
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 408 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDAIK 584
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 585 ELNGMMVDGQPMKVQLS 635
++G ++ G+ ++V+ +
Sbjct: 169 AIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 52.0 bits (119), Expect = 5e-07
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 183 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGREAIQNLNG 359
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + ++G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDG 172
Query: 360 ELVHGQAIKIEAA 398
++HG+ +++ A
Sbjct: 173 RIIHGRQVRVRFA 185
Score = 48.0 bits (109), Expect = 9e-06
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 408 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDAIK 584
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 585 ELNGMMVDGQPMKVQLS 635
++G ++ G+ ++V+ +
Sbjct: 169 AIDGRIIHGRQVRVRFA 185
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 52.0 bits (119), Expect = 5e-07
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKELNGM 599
K++VGNL R EV ++F K+G + DI G FV + D DA++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 600 MVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHW--SKECPKALGPD-RNGFRDRAF 770
DG+ ++V+ + + PG G P Q RGG + + + GP R G+R
Sbjct: 70 EFDGRRIRVEFTRGVGPRGPG-GRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVE 128
Query: 771 GRDPT 785
G PT
Sbjct: 129 GLPPT 133
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 180 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 347
G+ K+++GNL E ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 348 NLNGELVHGQAIKIE 392
+G G+ I++E
Sbjct: 65 ARDGYEFDGRRIRVE 79
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 51.6 bits (118), Expect = 7e-07
Identities = 35/124 (28%), Positives = 57/124 (45%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 611
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 612 QPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGRDPTLR 791
+ + + S + R G GD GRGG G R+ F DR + R P R
Sbjct: 64 ERVILDYS----KPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRF-DR-YDRGPPRR 117
Query: 792 RRRH 803
R+
Sbjct: 118 ESRY 121
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 374
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 375 QAIKIEAAKSR 407
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 51.6 bits (118), Expect = 7e-07
Identities = 35/124 (28%), Positives = 57/124 (45%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 611
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 612 QPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGRDPTLR 791
+ + + S + R G GD GRGG G R+ F DR + R P R
Sbjct: 64 ERVILDYS----KPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRF-DR-YDRGPPRR 117
Query: 792 RRRH 803
R+
Sbjct: 118 ESRY 121
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 374
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 375 QAIKIEAAKSR 407
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 51.6 bits (118), Expect = 7e-07
Identities = 35/124 (28%), Positives = 57/124 (45%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 611
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 612 QPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGRDPTLR 791
+ + + S + R G GD GRGG G R+ F DR + R P R
Sbjct: 64 ERVILDYS----KPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRF-DR-YDRGPPRR 117
Query: 792 RRRH 803
R+
Sbjct: 118 ESRY 121
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 374
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 375 QAIKIEAAKSR 407
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 51.6 bits (118), Expect = 7e-07
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKELNGM 599
K++VGNL R EV ++F K+G + DI G FV + D DA++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 600 MVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHW--SKECPKALGPD-RNGFRDRAF 770
DG+ ++V+ T V R G P Q RGG + + + GP R G+R
Sbjct: 70 EFDGRRIRVEF-TRGVGPRGPSGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVE 128
Query: 771 GRDPT 785
G PT
Sbjct: 129 GLPPT 133
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 180 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 347
G+ K+++GNL E ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 348 NLNGELVHGQAIKIE 392
+G G+ I++E
Sbjct: 65 ARDGYEFDGRRIRVE 79
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELN 593
++ V N+ K R P++ +F+K G VV+ +I+ N +GFV + D + A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 594 GMMVDGQPMKVQLSTSRVRQR 656
G ++G+ ++V L+T RV +
Sbjct: 161 GTTIEGRRVEVNLATQRVHNK 181
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +3
Query: 186 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 347
G ++ + N+ K E DL +FEK G VV+ +I+ N +GFV M+N A
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 348 NLNGELVHGQAIKIEAAKSR 407
NG + G+ +++ A R
Sbjct: 158 EFNGTTIEGRRVEVNLATQR 177
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELN 593
++ V N+ K R P++ +F+K G VV+ +I+ N +GFV + D + A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 594 GMMVDGQPMKVQLSTSRVRQR 656
G ++G+ ++V L+T RV +
Sbjct: 161 GTTIEGRRVEVNLATQRVHNK 181
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +3
Query: 186 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 347
G ++ + N+ K E DL +FEK G VV+ +I+ N +GFV M+N A
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 348 NLNGELVHGQAIKIEAAKSR 407
NG + G+ +++ A R
Sbjct: 158 EFNGTTIEGRRVEVNLATQR 177
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGMM 602
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 603 VDGQPMKVQLSTSRVRQRPGMG 668
+ G +V+LST + R G G
Sbjct: 64 ICGVRARVELSTGQRRGGGGRG 85
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGMM 602
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 603 VDGQPMKVQLSTSRVRQRPGMG 668
+ G +V+LST + R G G
Sbjct: 64 ICGVRARVELSTGQRRGGGGRG 85
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 50.4 bits (115), Expect = 2e-06
Identities = 34/185 (18%), Positives = 77/185 (41%), Gaps = 32/185 (17%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 359
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 214
Query: 360 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 482
+ G +K+ +++K ++V NL + ++
Sbjct: 215 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 274
Query: 483 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 641
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 275 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQR 334
Query: 642 RVRQR 656
+ +R
Sbjct: 335 KEDRR 339
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Frame = +3
Query: 312 MENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELF 491
M G I+NL+ V + + + + T ++V N D + +LF
Sbjct: 114 MRRSGAGNIFIKNLDKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLF 173
Query: 492 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 632
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 174 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 226
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 49.6 bits (113), Expect = 3e-06
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 353
I++G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 354 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC-DIVR 530
N ++G+ IK+ A + + IFVGNL + + + F FG +++ I+R
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 134
Query: 531 NY------GFVHLD-ATGDVND-AIKELNGMMVDGQPMKVQLSTSR 644
+ GF ++ A+ + +D A++ +NG + + + V + R
Sbjct: 135 DVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR 180
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 49.6 bits (113), Expect = 3e-06
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 353
I++G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 354 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC-DIVR 530
N ++G+ IK+ A + + IFVGNL + + + F FG +++ I+R
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 144
Query: 531 NY------GFVHLD-ATGDVND-AIKELNGMMVDGQPMKVQLSTSR 644
+ GF ++ A+ + +D A++ +NG + + + V + R
Sbjct: 145 DVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR 190
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 48.4 bits (110), Expect = 7e-06
Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 350
KIF+G L+ TT+ +R + ++G + + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 351 ----LNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC 518
++G+ V + K+R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 519 DIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDP 674
+I+ R +GFV D V+ + + MV+G V+ S+ +
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQ-KSHMVNGHRCDVRKGLSKDEMSKAQMNR 202
Query: 675 EQCYRCGR 698
++ R GR
Sbjct: 203 DRETRGGR 210
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 48.4 bits (110), Expect = 7e-06
Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 350
KIF+G L+ TT+ +R + ++G + + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 351 ----LNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC 518
++G+ V + K+R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 519 DIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDP 674
+I+ R +GFV D V+ + + MV+G V+ S+ +
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQ-KSHMVNGHRCDVRKGLSKDEMSKAQMNR 202
Query: 675 EQCYRCGR 698
++ R GR
Sbjct: 203 DRETRGGR 210
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 48.4 bits (110), Expect = 7e-06
Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 350
KIF+G L+ TT+ +R + ++G + + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 351 ----LNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC 518
++G+ V + K+R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 519 DIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDP 674
+I+ R +GFV D V+ + + MV+G V+ S+ +
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQ-KSHMVNGHRCDVRKGLSKDEMSKAQMNR 202
Query: 675 EQCYRCGR 698
++ R GR
Sbjct: 203 DRETRGGR 210
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 46.8 bits (106), Expect = 2e-05
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 19/168 (11%)
Frame = +3
Query: 222 KTTEADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGRE-AIQNLNGELVHGQ 377
KTT+ + FE GTVV C+I R +GFV M + VG + + + ++ G+
Sbjct: 183 KTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS--VGEQNKVLAIPQHMIDGR 240
Query: 378 AIKIEAAKSRKAPSTPT-TKIFVGNLTDKTRAPEVRELF-----QKFGTVVECDI----- 524
++ R P+ ++IFVG LTDK ++R++F T V D+
Sbjct: 241 RCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKP 300
Query: 525 VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMG 668
R + FV L ++ + + I + V+G + + ++ R +G
Sbjct: 301 FRGFAFVTL-SSAEAAERIVSKGSLTVNGLSVGLSIAQPREENNQSVG 347
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 353
+F+GN+S +E +R +F K G V+ +V + YGF+ + Q AI+NL
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 354 NGELVHGQAIKIEAA 398
NG + G+ +++++A
Sbjct: 80 NGYELSGRILRVDSA 94
Score = 36.3 bits (80), Expect = 0.029
Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Frame = +3
Query: 435 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKEL 590
+FVGN++ +R +F K G V+ +V + YGF+ AI+ L
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 591 NGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDR 746
NG + G+ ++V + + G + EC P+R
Sbjct: 80 NGYELSGRILRVDSAAGGMNMEE-FGSSSNAPAPVEENPYGPECDAGKAPER 130
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 46.4 bits (105), Expect = 3e-05
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 353
KIF+G +S + DL F +YG V + + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 354 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 509
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 90 REQTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 46.4 bits (105), Expect = 3e-05
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 353
KIF+G +S + DL F +YG V + + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 354 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 509
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 90 REQTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 44.4 bits (100), Expect = 1e-04
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Frame = +3
Query: 186 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 341
G + I NLS +TT DLR FE+YG + + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 342 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRA-PEVREL 488
+ +G+LV G+ +++ AK + PS G +T A P+V EL
Sbjct: 77 LDRTDGKLVDGRELRVTLAKYDR-PSDERGGRGGGGGRRRTAAEPDVAEL 125
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +3
Query: 405 RKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDA 557
R AP T + + NL+ +T ++R F+++G + + I R+ +GFV
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 558 TGDVNDAIKELNGMMVDGQPMKVQLS 635
D A+ +G +VDG+ ++V L+
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +3
Query: 186 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 341
G + I NLS +TT DLR FE+YG + + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 342 IQNLNGELVHGQAIKIEAAK 401
+ +G+LV G+ +++ AK
Sbjct: 77 LDRTDGKLVDGRELRVTLAK 96
Score = 39.1 bits (87), Expect = 0.004
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 15/147 (10%)
Frame = +3
Query: 405 RKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDA 557
R AP T + + NL+ +T ++R F+++G + + I R+ +GFV
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 558 TGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECP--KA 731
D A+ +G +VDG+ ++V L+ RP E+ R G GG P ++
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLAK---YDRP---SDERGGRGGGGGRRRSRSPRRRS 123
Query: 732 LGP----DRNGFRDRAFGRDPTLRRRR 800
P R+ R R+ R P R RR
Sbjct: 124 RSPRYSRSRSPRRSRSRTRSPPSRDRR 150
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----------YGFVHMENEQVGREA 341
K+F+G + E DLR LFE++G + E I+++ + H ++ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 342 IQNLNGELVHGQAIKIEAAKSRKAPSTP-----TTKIFVGNLTDKTRAPEVRELFQKFGT 506
+ + +A++++ A + P++P K+F+G L+ + EVR LF FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 507 VVECDIVR 530
+ E ++R
Sbjct: 150 LDEVTVLR 157
Score = 37.9 bits (84), Expect = 0.009
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 10/148 (6%)
Frame = +3
Query: 246 PLFEKYGTVVECDIVRNYGFV--HMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPS 419
P YG++ NY + ME++ A+Q ++ A + R+
Sbjct: 368 PAASSYGSLAAAAAAANYSSLLSGMESQHNAAAALQL--AQIQQQAAAALPMVTPREVLG 425
Query: 420 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVND 575
+F+ +L + E+ ++F FG +V + + +GFV D
Sbjct: 426 PDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQA 485
Query: 576 AIKELNGMMVDGQPMKVQLSTSRVRQRP 659
AI +NG + + +KVQL R RP
Sbjct: 486 AITAMNGFQIGMKRLKVQLKRPRNESRP 513
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 533
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/66 (24%), Positives = 40/66 (60%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 374
+++IG L ++ ++ D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 375 QAIKIE 392
+ + +E
Sbjct: 63 ERVILE 68
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 611
++++G L ++ +V F+ +G + + + +GFV D +DA+ +LNG + G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 612 QPMKVQLSTSRV---RQRPGMG 668
+ + ++ +V +R G G
Sbjct: 63 ERVILEFPRRKVGYNEERSGSG 84
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----------YGFVHMENEQVGREA 341
K+F+G + E DLR LFE++G + E I+++ + H ++ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 342 IQNLNGELVHGQAIKIEAAKSRKAPSTP-----TTKIFVGNLTDKTRAPEVRELFQKFGT 506
+ + +A++++ A + P++P K+F+G L+ + EVR LF FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 507 VVECDIVR 530
+ E ++R
Sbjct: 150 LDEVTVLR 157
Score = 37.9 bits (84), Expect = 0.009
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 10/148 (6%)
Frame = +3
Query: 246 PLFEKYGTVVECDIVRNYGFV--HMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPS 419
P YG++ NY + ME++ A+Q ++ A + R+
Sbjct: 368 PAASSYGSLAAAAAAANYSSLLSGMESQHNAAAALQL--AQIQQQAAAALPMVTPREVLG 425
Query: 420 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVND 575
+F+ +L + E+ ++F FG +V + + +GFV D
Sbjct: 426 PDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQA 485
Query: 576 AIKELNGMMVDGQPMKVQLSTSRVRQRP 659
AI +NG + + +KVQL R RP
Sbjct: 486 AITAMNGFQIGMKRLKVQLKRPRNESRP 513
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 533
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +3
Query: 192 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 347
F +++GN +TTE DL F + G V IV R + FV E + A+
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63
Query: 348 NLNGELVHGQAIKIEAAKSR 407
NG +G+A+++ A++R
Sbjct: 64 QFNGVDFNGRALRVNLAQNR 83
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 377
++I N+ + TE L LF++Y ++ V++Y F+H +A++ NG+ + G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 378 AIKIEAAK 401
++ AK
Sbjct: 439 VVEASLAK 446
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/67 (22%), Positives = 38/67 (56%)
Frame = +3
Query: 435 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQ 614
+++ N+ + ++ ELF+++ ++ V++Y F+H + D A++E NG ++G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 615 PMKVQLS 635
++ L+
Sbjct: 439 VVEASLA 445
Score = 35.1 bits (77), Expect = 0.066
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 350
+I++G++ E L PLFEK G + + ++ R Y FV N++ A +
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 351 LNG-ELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 485
+G E+ G+ +K+ S T++F+GN+ E+ E
Sbjct: 261 YDGHEISTGKPLKVNV-------SIANTRLFIGNIPKTKSKDEILE 299
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 41.5 bits (93), Expect = 8e-04
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 16/171 (9%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVEC--DIVRNYGFVHMENEQVGREAIQNLNGELV 368
++++G S + +R L + E DIV N H V ++ N L
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLLA 69
Query: 369 H--GQAIKIEAAKSRKAPS----TPTTKIFVGNLTDKTRAPEVRELFQKFGT----VVEC 518
G K+ AK P+ + + +FV ++ P+ EL+Q FG VV+C
Sbjct: 70 KFSGLFTKVNFAKKEPKPAENVMSNISNVFVRGISRDM--PDT-ELYQAFGGITDGVVQC 126
Query: 519 DIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL----STSRVRQRP 659
+ YGFV D + I E++G ++G+ + V + R R+RP
Sbjct: 127 HVADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWARPDTVGRKRKRP 177
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 41.1 bits (92), Expect = 0.001
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Frame = +3
Query: 423 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 578
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 579 IKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK-ALGPDRNGF 755
+++ +++D + + V S S V Q Q +E PK P R
Sbjct: 299 FFKMDNVLIDDRRIHVDFSQS-VSQNYKYKPKSQ----------QQEAPKRRQSPQRRPE 347
Query: 756 RDRAFGRDPTLRRRRHPS 809
R+ R P+ RRRR PS
Sbjct: 348 VKRSHQRSPSPRRRRSPS 365
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 353
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 354 NGELVHGQAIKIEAAKS 404
+ L+ + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 41.1 bits (92), Expect = 0.001
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Frame = +3
Query: 423 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 578
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 579 IKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK-ALGPDRNGF 755
+++ +++D + + V S S V Q Q +E PK P R
Sbjct: 299 FFKMDNVLIDDRRIHVDFSQS-VSQNYKYKPKSQ----------QQEAPKRRQSPQRRPE 347
Query: 756 RDRAFGRDPTLRRRRHPS 809
R+ R P+ RRRR PS
Sbjct: 348 VKRSHQRSPSPRRRRSPS 365
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 353
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 354 NGELVHGQAIKIEAAKS 404
+ L+ + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 41.1 bits (92), Expect = 0.001
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Frame = +3
Query: 423 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 578
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
Query: 579 IKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK-ALGPDRNGF 755
+++ +++D + + V S S V Q Q +E PK P R
Sbjct: 230 FFKMDNVLIDDRRIHVDFSQS-VSQNYKYKPKSQ----------QQEAPKRRQSPQRRPE 278
Query: 756 RDRAFGRDPTLRRRRHPS 809
R+ R P+ RRRR PS
Sbjct: 279 VKRSHQRSPSPRRRRSPS 296
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 353
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 354 NGELVHGQAIKIEAAKS 404
+ L+ + I ++ ++S
Sbjct: 234 DNVLIDDRRIHVDFSQS 250
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +3
Query: 423 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDA 578
P+ + V NL+ T ++R++F +FG + +CD+V R +GF++ + D A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 579 IKELNGMMVDGQPMKVQLSTSRVRQRPGMG 668
+L +DG ++V S ++ P G
Sbjct: 134 RDKLCNTDLDGHKIRVDFSLTKRGHSPTPG 163
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Frame = +3
Query: 210 NLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGEL 365
NLS TTE DLR +F ++G + +CD+V R +GF++ + A L
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTD 141
Query: 366 VHGQAIKIEAAKSRKAPSTPTTKIFVGN 449
+ G I+++ + +++ S PT ++G+
Sbjct: 142 LDGHKIRVDFSLTKRGHS-PTPGQYMGD 168
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Frame = +3
Query: 486 LFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRV 647
+F+K G VV+ +I+ N +GFV + D + A E NG ++G+ ++V L+T RV
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 60
Query: 648 RQR 656
+
Sbjct: 61 HNK 63
Score = 35.9 bits (79), Expect = 0.038
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 249 LFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 407
+FEK G VV+ +I+ N +GFV M+N A NG + G+ +++ A R
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Frame = +3
Query: 396 AKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLD 554
A++ +A P +FVG + +T ++R F+ +G + + +V R Y F+
Sbjct: 93 AENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYS 152
Query: 555 ATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQ 653
+++ A K+ +G+ VDG+ + V R ++
Sbjct: 153 DKAEMHTAYKKADGIKVDGKRLVVDYERGRTQK 185
Score = 35.1 bits (77), Expect = 0.066
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 356
+F+G ++ +T+E+ LR FE YG + + +V R Y F+ ++ A + +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 357 GELVHGQAIKIEAAKSRKAPSTPTTKIFVG-NLTDKTRAP----EVRELFQKFG 503
G V G+ + ++ + R + ++ G T KTR E RE+ FG
Sbjct: 166 GIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKTREAKSVIEEREIASGFG 219
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Frame = +3
Query: 396 AKSRKAPS----TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV---------RNY 536
A R++P+ +P ++ + NL+ + E+F +G + D+ R Y
Sbjct: 118 ASPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGY 177
Query: 537 GFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 644
G+V D D +IK ++G +DG + V+++ R
Sbjct: 178 GYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMTIGR 213
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV---------RNYGFVHMENEQVGREAIQ 347
++ I NLS + L +F YG + D+ R YG+V +N + ++I+
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 348 NLNGELVHGQAIKIEAAKSRKA 413
+++G + G A+ +E R++
Sbjct: 194 HMDGGQIDGMAVHVEMTIGRQS 215
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Frame = +3
Query: 189 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME--NEQVGREAI 344
T +F+GN+ E ++R +FE++G V E DI Y FV + ++ + +A
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 345 QNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV--VEC 518
+ G +KI KS+ + ++FVG L +++ F +FG V ++
Sbjct: 228 EQDRPIRAGGSRMKIGYGKSQ-----VSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDY 282
Query: 519 DIVRNYGFVHLDATGDVNDAIKELNGMMV 605
D + Y +V + T +A + L G +
Sbjct: 283 DHGQPYAYVVYENTHTSQEACRSLRGACI 311
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Frame = +3
Query: 189 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME--NEQVGREAI 344
T +F+GN+ E ++R +FE++G V E DI Y FV + ++ + +A
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 345 QNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV--VEC 518
+ G +KI KS+ + ++FVG L +++ F +FG V ++
Sbjct: 228 EQDRPIRAGGSRMKIGYGKSQ-----VSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDY 282
Query: 519 DIVRNYGFVHLDATGDVNDAIKELNGMMV 605
D + Y +V + T +A + L G +
Sbjct: 283 DHGQPYAYVVYENTHTSQEACRSLRGACI 311
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Frame = +3
Query: 189 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME--NEQVGREAI 344
T +F+GN+ E ++R +FE++G V E DI Y FV + ++ + +A
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 345 QNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV--VEC 518
+ G +KI KS+ + ++FVG L +++ F +FG V ++
Sbjct: 205 EQDRPIRAGGSRMKIGYGKSQ-----VSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDY 259
Query: 519 DIVRNYGFVHLDATGDVNDAIKELNGMMV 605
D + Y +V + T +A + L G +
Sbjct: 260 DHGQPYAYVVYENTHTSQEACRSLRGACI 288
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +3
Query: 183 TGTFKIFIGNLSDKTTEADLRPLFEKYGTV----VECD----IVRNYGFVHMENEQVGRE 338
+G F +++GN +TTE +L F G + + CD R + F+ E +
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 339 AIQNLNGELVHGQAIKIEAA 398
A++ +NG +G+ +++ A
Sbjct: 62 AVEQMNGAEFNGRPLRVNLA 81
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +3
Query: 435 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKEL 590
++VGN +T E+ F G + IV R + F+ G A++++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 591 NGMMVDGQPMKVQLS 635
NG +G+P++V L+
Sbjct: 67 NGAEFNGRPLRVNLA 81
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 353
I+IG LS +E D+ +F +YG V+ +++R+ + F+ ++++ A+ N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 354 NGELVHGQAIKIEAAKSRKAP 416
NG +H + I+++ + K P
Sbjct: 100 NGISLHKRMIRVDHVEEYKVP 120
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 342 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKT-RAPEVRELFQKFGTVVEC 518
I NL G I + S K P ++F+GN+ ++ ELF+ FG ++
Sbjct: 56 ILNLVGSAAVNSDISYDT--SSKDPHMIRARVFIGNIARAIITRDDIIELFRPFGKIIAV 113
Query: 519 DIV--RNYGFVHLDATGDVNDAIKELNGM 599
+ + +GFV + G +++ + LNGM
Sbjct: 114 NYFAQQGFGFVQFNEAGSADESCRSLNGM 142
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 39.1 bits (87), Expect = 0.004
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN----EQVGRE 338
K+FIG LS TT+ L F ++G VV+ ++R+ +GFV + E +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 339 AIQNLNGELVHG-QAIKIEAAKSRKAP------STPTTKIFVGNLTDKTRAPE-VRELFQ 494
L G+ V +AI E S P P K+ + +T+ + + +R F+
Sbjct: 110 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 169
Query: 495 KFGTVVECDIV---RNYGFV 545
FGT+ + +I+ R GFV
Sbjct: 170 TFGTLDQVEILGQPRGLGFV 189
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 39.1 bits (87), Expect = 0.004
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN----EQVGRE 338
K+FIG LS TT+ L F ++G VV+ ++R+ +GFV + E +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 339 AIQNLNGELVHG-QAIKIEAAKSRKAP------STPTTKIFVGNLTDKTRAPE-VRELFQ 494
L G+ V +AI E S P P K+ + +T+ + + +R F+
Sbjct: 130 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 189
Query: 495 KFGTVVECDIV---RNYGFV 545
FGT+ + +I+ R GFV
Sbjct: 190 TFGTLDQVEILGQPRGLGFV 209
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 39.1 bits (87), Expect = 0.004
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN----EQVGRE 338
K+FIG LS TT+ L F ++G VV+ ++R+ +GFV + E +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 339 AIQNLNGELVHG-QAIKIEAAKSRKAP------STPTTKIFVGNLTDKTRAPE-VRELFQ 494
L G+ V +AI E S P P K+ + +T+ + + +R F+
Sbjct: 131 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 190
Query: 495 KFGTVVECDIV---RNYGFV 545
FGT+ + +I+ R GFV
Sbjct: 191 TFGTLDQVEILGQPRGLGFV 210
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/84 (26%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +3
Query: 183 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGRE 338
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++V +
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-D 189
Query: 339 AIQNLNGELVHGQAIKIEAAKSRK 410
+ ++ ++G+ ++ + A+ ++
Sbjct: 190 KVCEIHFHEINGKMVECKKAQPKE 213
Score = 34.7 bits (76), Expect = 0.087
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 533
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = +3
Query: 420 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVND 575
T TKIFVG L T + E F++FG + E ++ R YGFV +
Sbjct: 32 TMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAER 91
Query: 576 AIKELNGMMVDGQPMKVQLS 635
A K+ N ++DG+ V L+
Sbjct: 92 ACKDPN-PIIDGRKANVNLA 110
Score = 35.9 bits (79), Expect = 0.038
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 350
KIF+G L T++ L FE++G + E ++ R YGFV M++ A ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 351 LNGELVHGQAIKIEAAKSRKAPST 422
N ++ G+ + A P T
Sbjct: 96 PN-PIIDGRKANVNLAYLGAKPRT 118
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +3
Query: 192 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 347
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 348 NLNGELVHGQAIKI 389
+N + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +3
Query: 192 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 347
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 348 NLNGELVHGQAIKI 389
+N + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/84 (26%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +3
Query: 183 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGRE 338
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++V +
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-D 189
Query: 339 AIQNLNGELVHGQAIKIEAAKSRK 410
+ ++ ++G+ ++ + A+ ++
Sbjct: 190 KVCEIHFHEINGKMVECKKAQPKE 213
Score = 34.7 bits (76), Expect = 0.087
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 533
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 651 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNG 752
QR G G CY CG GH+S++CP A +G
Sbjct: 59 QRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSG 92
Score = 33.5 bits (73), Expect = 0.20
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 654 RPGMGDPEQCYRCGRGGHWSKECPK 728
R G G CY C GH+S++CPK
Sbjct: 28 RRGGGGGSTCYNCQETGHFSRDCPK 52
Score = 32.7 bits (71), Expect = 0.35
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 675 EQCYRCGRGGHWSKECPKA 731
++CY CGR GH S+EC ++
Sbjct: 107 QKCYNCGRSGHISRECTES 125
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 639 SRVRQRPGMGDPEQCYRCGRGGHWSKECP 725
SR G + ++CY+C GH S++CP
Sbjct: 119 SRECTESGSAEEKRCYQCQETGHISRDCP 147
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 37.1 bits (82), Expect = 0.016
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 183 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC 281
TG ++F+GNL ++ E +L+ LF +G + EC
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAEC 145
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 408 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHL 551
K T ++FVGNL ++ + E++ELF G + EC + + + F+ L
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRL 157
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +3
Query: 192 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 347
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 348 NLNGELVHGQAIK 386
+N + GQ ++
Sbjct: 267 GMNMFDLGGQYLR 279
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 35.9 bits (79), Expect = 0.038
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Frame = +3
Query: 306 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 485
+ +E E E IQN + + A + +KA + +F+GN+ + EV E
Sbjct: 22 MEIEAESAILEQIQNKMAKNLESAAYVPPTEEEQKAIDAKS--VFIGNVDFNSTIEEVEE 79
Query: 486 LFQKFGTVVECDI--------VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 641
F+ G +V I +N+ ++ D + + +A+ +NG + +P+ V T+
Sbjct: 80 HFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNGSLFRSRPIVV---TA 135
Query: 642 RVRQRPGMG 668
+ PGMG
Sbjct: 136 KRTNIPGMG 144
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 35.5 bits (78), Expect = 0.050
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 654 RPGMGDPEQCYRCGRGGHWSKECPKALG-PDRNG 752
R G G P C+ C GH S+ CPK +G D +G
Sbjct: 161 RRGRGGPGHCFHCQEHGHISRMCPKKVGETDEHG 194
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.050
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 353
+++G ++ TE L F +G VV I R +GFV + + AI N+
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 354 NGELVHGQAIKIEAAKSRKA 413
N + G+ I++ A+ KA
Sbjct: 73 NESELFGKTIRVNFARPPKA 92
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVECDI--------VRNYGFVHMENEQVGREAIQNL 353
+F+ N+ ++ TE D+ F +YG + + ++ Y V E ++ EAI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 354 NGELVHGQAIKIE 392
N + GQ +K++
Sbjct: 117 NDTDLLGQNVKVD 129
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 338
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 590
+IFVG T E+RE F+KF V + +V++ YGF+ + T D + I++L
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 125
Query: 591 NGMMVDGQPMKVQL 632
++ + K+ L
Sbjct: 126 TPKQLEFRSRKLNL 139
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 35.1 bits (77), Expect = 0.066
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Frame = +3
Query: 306 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 485
+ +E E + IQN + + A + +KA + +F+GN+ + E+ E
Sbjct: 16 MEIEAESAILQQIQNKMAKHLESAAYVPPTEEEQKAIDAKS--VFIGNVDFNSTIEEIEE 73
Query: 486 LFQKFGTVVECDI--------VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 641
F+ G +V+ I +N+ ++ D + + +A+ +NG + +P+ V T+
Sbjct: 74 HFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNGSLFRSRPIVV---TA 129
Query: 642 RVRQRPGMG 668
+ PGMG
Sbjct: 130 KRTNIPGMG 138
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 35.1 bits (77), Expect = 0.066
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 747 CGRGP-APSGTPWTSGPRGHSGSTAR-GRPCPAAAGHDSSTTA 625
CG GP PSG P T G G+ GS G P A G +S T A
Sbjct: 138 CGVGPPGPSGAPGTDGNPGNDGSPGNPGTPGQDAVGDESPTAA 180
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 338
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 590
+IFVG T E+RE F+KF V + +V++ YGF+ + T D + I++L
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 126
Query: 591 NGMMVDGQPMKVQL 632
++ + K+ L
Sbjct: 127 TPKQLEFRSRKLNL 140
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein
T23F6.4 protein.
Length = 872
Score = 34.7 bits (76), Expect = 0.087
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 28/142 (19%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEK-YGTVVEC--------------DIVRNYGFVHMENEQVG 332
+F+ NL+ TT+ L LF K YG +V+ + +GFV
Sbjct: 643 LFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTAFDA 702
Query: 333 REAIQNLNGELVHGQAIKIEAAKSRKAPSTPT-------------TKIFVGNLTDKTRAP 473
+ A++++ GEL+ G +++++ + A TK+ V NL +
Sbjct: 703 KTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECTKLLVRNLPFEASVK 762
Query: 474 EVRELFQKFGTVVECDIVRNYG 539
EV LF+ FG V I + G
Sbjct: 763 EVETLFETFGAVKTIRIPKKPG 784
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 189 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 290
T ++F+ NL T E DL+ LF+KYG V E +V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Frame = +3
Query: 189 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI-------VRNYGFVHMENEQVGREAIQ 347
T ++ + NL TE LR FEKYG + + + R + FV +E A+
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 348 NLNGELVHGQAIKIEAAK 401
N + + + +E +
Sbjct: 62 KSNQTFFNSKKLTVEECR 79
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +3
Query: 426 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFVHLDATGDVNDAIK 584
TT++ V NL ++R+ F+K+G + + + R + FV G ++A+
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 585 ELNGMMVDGQPMKVQ 629
+ N + + + V+
Sbjct: 62 KSNQTFFNSKKLTVE 76
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 534 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 635
+GFV D A+K++ G ++DG +++++S
Sbjct: 691 FGFVQFYTAFDAKTALKDMQGELLDGHSLELKIS 724
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 669 DPEQCYRCGRGGHWSKECPKALGP--DRNGFRDRAFG 773
+P CY C + GH S++CP+ P RNGF + G
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 669 DPEQCYRCGRGGHWSKECPKALGP--DRNGF 755
+P CY C + GH S++CP+ P RNGF
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 672 PEQCYRCGRGGHWSKECPKALGP 740
P C+ CG GH S ECP P
Sbjct: 472 PRGCFNCGEQGHRSNECPNPAKP 494
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 669 DPEQCYRCGRGGHWSKECPKALGP--DRNGFRDRAFG 773
+P CY C + GH S++CP+ P RNGF + G
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 669 DPEQCYRCGRGGHWSKECPKALGP--DRNGF 755
+P CY C + GH S++CP+ P RNGF
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 672 PEQCYRCGRGGHWSKECPKALGP 740
P C+ CG GH S ECP P
Sbjct: 472 PRGCFNCGEQGHRSNECPNPAKP 494
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 669 DPEQCYRCGRGGHWSKECPKALGP--DRNGFRDRAFG 773
+P CY C + GH S++CP+ P RNGF + G
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 669 DPEQCYRCGRGGHWSKECPKALGP--DRNGF 755
+P CY C + GH S++CP+ P RNGF
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 672 PEQCYRCGRGGHWSKECPKALGP 740
P C+ CG GH S ECP P
Sbjct: 472 PRGCFNCGEQGHRSNECPNPAKP 494
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCPA 655
P P+G GP GH GS+ GRP PA
Sbjct: 223 PGPAGPRGAPGPAGHPGSSGGGRPGPA 249
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Frame = +3
Query: 192 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR--------NYGFVHMENEQVGREAIQ 347
F++F G+L ++ ++ L F KY + + +VR YGFV + + A++
Sbjct: 203 FRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMR 262
Query: 348 NLNGELVHGQAIKI 389
++G+ V + IK+
Sbjct: 263 EMDGKYVGNRPIKL 276
Score = 32.7 bits (71), Expect = 0.35
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKE 587
++F G+L ++ + + F+K+ + + +VR YGFV + D A++E
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 588 LNGMMVDGQPMKVQLSTSRVR 650
++G V +P+K++ S + R
Sbjct: 264 MDGKYVGNRPIKLRKSAWKER 284
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.35
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 195 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 293
KI + N+S K T++ L+ F +YG + C + R
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 32.7 bits (71), Expect = 0.35
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 651 QRPGMGDPEQCYRCGRGGHWSKECP 725
+R M E C RC GHW ECP
Sbjct: 657 ERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 672 PEQCYRCGRGGHWSKECPKALGP 740
P C+ CG GH SKEC K P
Sbjct: 569 PRGCHNCGEEGHISKECDKPKVP 591
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 32.7 bits (71), Expect = 0.35
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 651 QRPGMGDPEQCYRCGRGGHWSKECP 725
+R M E C RC GHW ECP
Sbjct: 657 ERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 672 PEQCYRCGRGGHWSKECPKALGP 740
P C+ CG GH SKEC K P
Sbjct: 569 PRGCHNCGEEGHISKECDKPKVP 591
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 648 RQRPGMGDPEQCYRCGRGGHWSKECPKAL 734
R+RP P QC+ CG GH S CPK +
Sbjct: 603 RERP----PPQCFTCGEMGHISTYCPKRI 627
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Frame = +3
Query: 648 RQRPGM--GDPEQ---CYRCGRGGHWSKECPKAL 734
R++PG+ G P C RC + GHW K CP L
Sbjct: 142 RRQPGIMTGPPPPTYTCNRCSQPGHWYKNCPMKL 175
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 622
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = -1
Query: 738 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 622
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 738 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 622
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 622
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = -1
Query: 738 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 622
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 738 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 622
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 198 IFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 353
+FI +L ++DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 337 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 396
Query: 354 NGELVHGQAIKIEAAKSRKAP 416
NG + + +K++ R P
Sbjct: 397 NGFQIGSKRLKVQLKVDRGNP 417
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 534 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 644
+GFV + +AI +NG + + +KVQL R
Sbjct: 378 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 414
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 672 PEQCYRCGRGGHWSKECPKALGP 740
P C+ CG GH S ECP P
Sbjct: 261 PRGCFNCGEQGHRSNECPNPAKP 283
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 669 DPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 773
+P CY C + GH S+EC + P R G R FG
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP-REG-RTGGFG 213
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 672 PEQCYRCGRGGHWSKECPKALGP 740
P C+ CG GH S ECP P
Sbjct: 261 PRGCFNCGEQGHRSNECPNPAKP 283
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 669 DPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 773
+P CY C + GH S+EC + P R G R FG
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP-REG-RTGGFG 213
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 622
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = -1
Query: 738 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 622
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 738 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 622
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 622
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = -1
Query: 738 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 622
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 738 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 622
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 672 PEQCYRCGRGGHWSKECPKALGP 740
P C+ CG GH S ECP P
Sbjct: 261 PRGCFNCGEQGHRSNECPNPAKP 283
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 669 DPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 773
+P CY C + GH S+EC + P R G R FG
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP-REG-RTGGFG 213
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 31.5 bits (68), Expect = 0.81
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 9/134 (6%)
Frame = +3
Query: 435 IFVGNLTDKTRAPEVRELFQK-FGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 590
++VGNL EV ELF FG V+ + Y +V V +A++
Sbjct: 165 VYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQASVCNALQN- 223
Query: 591 NGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNG-FRDRA 767
+G +P+K+Q S + +P EQ E +A+ RNG RDR
Sbjct: 224 DGFEFKERPLKIQHSRVAI-IKPQAKTDEQAL---------GEIEEAIRMGRNGDDRDRR 273
Query: 768 FGRDPTLRRRRHPS 809
R P RRRR PS
Sbjct: 274 RSRSP--RRRRSPS 285
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 31.5 bits (68), Expect = 0.81
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 9/134 (6%)
Frame = +3
Query: 435 IFVGNLTDKTRAPEVRELFQK-FGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 590
++VGNL EV ELF FG V+ + Y +V V +A++
Sbjct: 165 VYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQASVCNALQN- 223
Query: 591 NGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNG-FRDRA 767
+G +P+K+Q S + +P EQ E +A+ RNG RDR
Sbjct: 224 DGFEFKERPLKIQHSRVAI-IKPQAKTDEQAL---------GEIEEAIRMGRNGDDRDRR 273
Query: 768 FGRDPTLRRRRHPS 809
R P RRRR PS
Sbjct: 274 RSRSP--RRRRSPS 285
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 31.5 bits (68), Expect = 0.81
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 621 KVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKA 731
+V + R G P CY+C GH SK+CP++
Sbjct: 293 QVDADDKKKDSRKGNYRPPYCYKCKVVGHVSKDCPQS 329
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
Frame = +3
Query: 648 RQRPGM--GDPEQ---CYRCGRGGHWSKECP 725
R++PG+ G P C RC + GHW K CP
Sbjct: 142 RRQPGIMTGPPPPTYTCNRCSQPGHWYKNCP 172
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 622
P P G P GP G SG A G P + G D AP
Sbjct: 114 PCPQGPPGPPGPPGPSGD-AGGNGNPGSPGQDGQPGAP 150
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 622
P P G P GP G SG A G P + G D AP
Sbjct: 147 PCPQGPPGPPGPPGPSGD-AGGNGNPGSPGQDGQPGAP 183
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -1
Query: 744 GRG-PAPSGTPWTSGPRGHSGSTARGRPCPAAAG 646
GRG P PSG P + GP G G G P AG
Sbjct: 202 GRGLPGPSGAPGSQGPPGAPGQPGSGN-APGPAG 234
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 744 GRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSS 634
G P P+G P +GP G G + P A G+D +
Sbjct: 227 GNAPGPAGPPGPAGPNGQPGHPGQDGQ-PGAPGNDGT 262
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 587
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 588 LNGMMVDGQPMKVQLS 635
LNGM + + + VQL+
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical
protein B0222.2 protein.
Length = 477
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 384 KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATG 563
K++ + RK PS K +V L D+TR + R + + F T ++ GF H
Sbjct: 278 KLQNVQQRKTPSGKIRKFYVWLLPDRTRV-DGRNITKLFST-IQVFTACFAGFAH--GAN 333
Query: 564 DVNDAIKEL 590
DV++AI L
Sbjct: 334 DVSNAIAPL 342
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 738 GPAPSGTPWTSGPRGHSGSTARGRPCP 658
GP P+G P GP G GS +P P
Sbjct: 250 GPGPAGPPGPPGPPGQDGSGGAAQPGP 276
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 587
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 588 LNGMMVDGQPMKVQLS 635
LNGM + + + VQL+
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 587
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 325
Query: 588 LNGMMVDGQPMKVQLS 635
LNGM + + + VQL+
Sbjct: 326 LNGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 432 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 587
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 328
Query: 588 LNGMMVDGQPMKVQLS 635
LNGM + + + VQL+
Sbjct: 329 LNGMQLGDKQLVVQLA 344
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAPS 619
P+P G P SGP G +G+ A G P P +S+ P+
Sbjct: 183 PSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPA 222
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCP 658
P P G P T+GP G +G CP
Sbjct: 262 PGPDGNPGTAGPPGKAGGEGEKGICP 287
>Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.2 protein.
Length = 306
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 747 CGRGP-APSGTPWTSGPRGHSGSTARGRP-CPAAAGHDSSTTAP 622
C GP P+G P GP G++G A G+P P AG + AP
Sbjct: 162 CPAGPPGPAGNPGPKGPSGNAG--ADGQPGAPGNAGAAGAPGAP 203
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 747 CGRGPAPSGTPWTSGPRGHSGSTARGRP-CPAAAGHD 640
CG G + +G P + GP G GS GRP P G D
Sbjct: 113 CGCGTSAAGPPGSPGPDGQEGS--NGRPGAPGTNGPD 147
>CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical
protein C52D10.13 protein.
Length = 281
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSG-STARGRPCPAAAGHDSSTTAPSWAV 610
P+P G P GP+G G S A G P PA + P+ V
Sbjct: 139 PSPVGPPGPPGPKGPDGESGAPGEPGPAGRPGNKGAPGPAGPV 181
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 622
P P G P +GP G +G+ G P P A G P
Sbjct: 184 PGPGGKPGPAGPPGENGN--NGEPQPGAPGEPGQPGQP 219
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 435 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 542
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 435 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 542
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 435 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 542
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 144
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 435 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 542
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 744 GRG-PAPSGTPWTSGPRGHSGSTARGRPCPAAAG 646
GRG P PSG P GP G G G P AG
Sbjct: 202 GRGLPGPSGAPGPQGPPGAPGQPGSGN-APGPAG 234
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 744 GRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSS 634
G P P+G P +GP G G + P A G+D +
Sbjct: 227 GNAPGPAGPPGPAGPNGQPGHPGQDGQ-PGAPGNDGT 262
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 738 GPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTA 625
GP P+G P +GP G+ G + P G D +++A
Sbjct: 196 GPGPAGPPGPAGPPGNDGQPGQ----PGGPGQDGASSA 229
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -1
Query: 738 GPAPSGTPWTSGPR---GHSGSTARGRPCP 658
GP P+G P +GP G SGS + G P P
Sbjct: 234 GPGPAGPPGPAGPAGPDGQSGSGSAGGPGP 263
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSST 631
P P G P GP+G +G A GRP PA + T
Sbjct: 173 PGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGT 208
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSST 631
P P G P GP+G +G A GRP PA + T
Sbjct: 167 PGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGT 202
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 678 QCYRCGRGGHWSKEC-PKALGPDRNGFRDRA 767
QC+ C GH ++ C KA R G+ D+A
Sbjct: 575 QCHYCKNVGHMARNCKKKAFAEKRKGYEDQA 605
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCP 658
P P G P T+GP G +G CP
Sbjct: 263 PGPDGNPGTAGPPGKAGGEGEKGICP 288
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPS 619
P P G P +GP G+ G A G P P +S+ P+
Sbjct: 187 PGPPGPPGPAGPAGNDG--AAGTPGPDGPAGESTYPEPA 223
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 738 GPAPSGTPWTSGPRGHSGSTARGRPCPAAAG 646
GP P+G P +GP G G++ P AAG
Sbjct: 224 GPGPAGPPGPAGPPGPDGASPTA--APGAAG 252
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +3
Query: 399 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI-----VRNYGFVHLDATG 563
+ K P +++ NL K E+ E+F KFG V + + R FV +
Sbjct: 9 RGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIF 68
Query: 564 DVNDAIKELNGMMVDGQPMKV 626
D A + L+G V + + V
Sbjct: 69 DAKTACEHLSGYNVSNRYLVV 89
>Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical
protein K08C9.4 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRP--CPAAAGHDSSTTAP 622
P P G P GP G G+ P AAG D AP
Sbjct: 154 PGPDGQPGQDGPAGIDGAPGEAGPQGDAGAAGQDGEAGAP 193
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 291 RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 407
+ + +V ENEQ AI LNG + +K+ A+ R
Sbjct: 53 KGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQR 91
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -1
Query: 738 GPAPSGTPWTSGPRGHSGST---ARGRPCPAAA 649
GP +GTP T G G++G+ A PCPA A
Sbjct: 239 GPGNAGTPGTPGAPGNAGAPGGDAAYCPCPARA 271
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 588 LNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 728
L G Q ++ S + + + D CY+CG GH++ C K
Sbjct: 222 LPGQTRQNQDHHHRVDLSLIPDKKNLSDVT-CYKCGEKGHYANRCHK 267
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Frame = +3
Query: 417 STP--TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGD 566
STP +T +++ L T +RE+ K+G + + + YGFV ++
Sbjct: 75 STPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQA 134
Query: 567 VNDAIKELNGMMVDGQPMKVQ 629
A+ LN V Q K+Q
Sbjct: 135 AAAAVDGLNTEGVQAQMAKLQ 155
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 651 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAF 770
QRP G CY C R H ++ C +A P++ R AF
Sbjct: 196 QRPDCGTLF-CYHCKREWHSNQTCDEARRPEKRKSRGLAF 234
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 651 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAF 770
QRP G CY C R H ++ C +A P++ R AF
Sbjct: 196 QRPDCGTLF-CYHCKREWHSNQTCDEARRPEKRKSRGLAF 234
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 651 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAF 770
QRP G CY C R H ++ C +A P++ R AF
Sbjct: 196 QRPDCGTLF-CYHCKREWHSNQTCDEARRPEKRKSRGLAF 234
>AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical
protein H04J21.1 protein.
Length = 1032
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 172 LDYGLLCTKNNKYITQVKNMN 110
LD+ LL T N ++T +KN+N
Sbjct: 271 LDFSLLTTSPNSFLTSIKNLN 291
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGST-ARGRP-CPAAAGHDSS 634
P P G P SG GHSG+ G P P A G D++
Sbjct: 231 PGPQGPPGPSGQPGHSGNDGVPGTPGNPGAPGGDAA 266
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 372 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 509
GQ + + +K S+P +FVGN++DK +R++ + G V
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNV 73
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 372 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 509
GQ + + +K S+P +FVGN++DK +R++ + G V
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNV 73
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 622
P P G P GP G SG A P + G D AP
Sbjct: 147 PCPQGPPGPPGPPGPSGD-AGSNGNPGSPGQDGQPGAP 183
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 738 GPAPSGTPWTSGPRGHSGSTARGRPCPAAAGH 643
GP G P GP GH G P P GH
Sbjct: 180 GPGQPGQPGPHGPNGHPGKPGSQGP-PGPPGH 210
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 747 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 622
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 747 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 622
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +3
Query: 417 STPT-TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDV 569
+TP+ T +++ L T +RE+ K+G + + + YGFV ++
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 161
Query: 570 NDAIKELNGMMVDGQPMKVQ 629
A+ LN V Q K+Q
Sbjct: 162 AAAVDGLNTEGVQAQMAKLQ 181
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 735 PAPSGTPWTSGPRGHSGSTARGRPCP 658
P P GTP G G GS A PCP
Sbjct: 257 PGPMGTPGGPGEPGIPGSDAAYCPCP 282
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 738 GPA-PSGTPWTSGPRGHSGSTARGRPCPAAAGHDS 637
GPA +G P GP G+ GS P PA D+
Sbjct: 235 GPAGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDA 269
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 747 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 622
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 747 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 622
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 738 GPA-PSGTPWTSGPRGHSGSTARGRPCPAAAGHDS 637
GPA +G P GP G+ GS P PA D+
Sbjct: 245 GPAGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDA 279
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 53 FVAEFVTYTCVGNSWSLFGVHIFNLCY 133
F+ +T++ + N+ F VHI N+CY
Sbjct: 189 FIIGLLTFSVIFNTTRFFEVHISNVCY 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,154,695
Number of Sequences: 27780
Number of extensions: 403412
Number of successful extensions: 2498
Number of sequences better than 10.0: 157
Number of HSP's better than 10.0 without gapping: 1609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2357
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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