Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_M02
         (877 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      26   1.3  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   7.0  
AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription fact...    24   7.0  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -1

Query: 553 CRPFAINLSRNVGLMLVFFLYLYHPTISLAVLESNS 446
           C P A  L   +GLMLVF+ Y  HP I    L+S +
Sbjct: 422 CFPIATFLV-GIGLMLVFYRYC-HPNIISRQLQSRT 455


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
 Frame = -1

Query: 712 KLPVTSSIYSYISKQLIFPNL*VNVWVDAAEDVLFVRLQVTNVFFP*YFSKYFCRPFAIN 533
           K P  SSI S + +  IFP     +W      +      + + F      + F   F IN
Sbjct: 8   KFPDLSSITSDLEEHEIFPTSNAIIWTTVTHILCAYLCYIFSKFACKIQIQSFSMAFPIN 67

Query: 532 LS--RNVGLMLVF 500
           L+    V L+LVF
Sbjct: 68  LAVPVTVTLLLVF 80


>AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription factor
           proboscipedia protein.
          Length = 76

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 571 YFSKYFCRPFAINLSRNVGL 512
           +F+KY CRP  I ++ ++ L
Sbjct: 44  HFNKYLCRPRRIEIAASLDL 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,606
Number of Sequences: 2352
Number of extensions: 15249
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)