Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_L24
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.28
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.28
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.36
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.36
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.48
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.48
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 32 0.48
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 32 0.48
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.48
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.48
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.48
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 30 1.9
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 30 2.6
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 4.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.5
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 4.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 4.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 4.5
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 5.9
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 5.9
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 5.9
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 5.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 5.9
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 5.9
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 7.8
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 7.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/90 (31%), Positives = 28/90 (31%)
Frame = +1
Query: 559 PPPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFPPPXGXXXXFPKXWGKPXXKXFXXXA 738
PPPP P P PP P GG PPP G P G P
Sbjct: 713 PPPPPGLPPITGGP-PPPPPPGGLPPITGGPPPPPPPGGLP---PISGGPPPPPPPPGGC 768
Query: 739 PKGPKTQKXPXLGGFXXXPPXXXXDXKXAP 828
P P P GGF PP AP
Sbjct: 769 PPPP---PPPPPGGFKGGPPPPPPPGMFAP 795
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 711 GFPPXFGEXXXXPXGGGKXXPPPPXPGXXGFXGGXGXXXP 592
G PP G P G PPPP P GF GG P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXG 676
PPPPG G P PP P GG PPP G
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 8/59 (13%)
Frame = +2
Query: 524 GGXGXFFXXXKXPPPPGXXXFFXGXXXPXPPKX--------PXXPGXGGGGXXFPPPXG 676
GG PPPPG G P PP P PG GG PPP G
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXGXXXFSPKXGGNP 712
PPPPG G P PP P GG PPP P GG P
Sbjct: 714 PPPPGLPPI-TGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISGGPP 759
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/90 (31%), Positives = 28/90 (31%)
Frame = +1
Query: 559 PPPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFPPPXGXXXXFPKXWGKPXXKXFXXXA 738
PPPP P P PP P GG PPP G P G P
Sbjct: 713 PPPPPGLPPITGGP-PPPPPPGGLPPITGGPPPPPPPGGLP---PISGGPPPPPPPPGGC 768
Query: 739 PKGPKTQKXPXLGGFXXXPPXXXXDXKXAP 828
P P P GGF PP AP
Sbjct: 769 PPPP---PPPPPGGFKGGPPPPPPPGMFAP 795
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 711 GFPPXFGEXXXXPXGGGKXXPPPPXPGXXGFXGGXGXXXP 592
G PP G P G PPPP P GF GG P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXG 676
PPPPG G P PP P GG PPP G
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 8/59 (13%)
Frame = +2
Query: 524 GGXGXFFXXXKXPPPPGXXXFFXGXXXPXPPKX--------PXXPGXGGGGXXFPPPXG 676
GG PPPPG G P PP P PG GG PPP G
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXGXXXFSPKXGGNP 712
PPPPG G P PP P GG PPP P GG P
Sbjct: 714 PPPPGLPPI-TGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISGGPP 759
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/90 (31%), Positives = 28/90 (31%)
Frame = +1
Query: 559 PPPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFPPPXGXXXXFPKXWGKPXXKXFXXXA 738
PPPP P P PP P GG PPP G P G P
Sbjct: 296 PPPPPGLPPITGGP-PPPPPPGGLPPITGGPPPPPPPGGLP---PISGGPPPPPPPPGGC 351
Query: 739 PKGPKTQKXPXLGGFXXXPPXXXXDXKXAP 828
P P P GGF PP AP
Sbjct: 352 PPPP---PPPPPGGFKGGPPPPPPPGMFAP 378
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 711 GFPPXFGEXXXXPXGGGKXXPPPPXPGXXGFXGGXGXXXP 592
G PP G P G PPPP P GF GG P
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXG 676
PPPPG G P PP P GG PPP G
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 8/59 (13%)
Frame = +2
Query: 524 GGXGXFFXXXKXPPPPGXXXFFXGXXXPXPPKX--------PXXPGXGGGGXXFPPPXG 676
GG PPPPG G P PP P PG GG PPP G
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXGXXXFSPKXGGNP 712
PPPPG G P PP P GG PPP P GG P
Sbjct: 297 PPPPGLPPI-TGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISGGPP 342
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = -3
Query: 711 GFPPXFGEXXXXPXGGGKXXPPP--PXPGXXGFXGGXGXXXPK 589
G PP G P GG PPP PG G GG G PK
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPK 223
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = -3
Query: 711 GFPPXFGEXXXXPXGGGKXXPPP--PXPGXXGFXGGXGXXXPK 589
G PP G P GG PPP PG G GG G PK
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPK 503
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 559 PPPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFPPP 669
PPPP G + P P PP + P P G PPP
Sbjct: 287 PPPPPSSG-MWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPP 670
PPPP G P PP P P G G PPP
Sbjct: 350 PPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGG-GGXXFPPPXG 676
PPPPG G PP P G G GG PPP G
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXGXXXFSPKXGG 706
PPPP + G P PP+ P G G PPP P G
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYP----SAGPGMYPPPPPSRPPAPPSGHG 379
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 559 PPPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFPPP 669
PPPP G + P P PP + P P G PPP
Sbjct: 297 PPPPPSSG-MWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPP 670
PPPP G P PP P P G G PPP
Sbjct: 360 PPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGG-GGXXFPPPXG 676
PPPPG G PP P G G GG PPP G
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXGXXXFSPKXGG 706
PPPP + G P PP+ P G G PPP P G
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYP----SAGPGMYPPPPPSRPPAPPSGHG 389
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -3
Query: 705 PPXFGEXXXXPXGGGKXXPPPPXPGXXGFXGGXGXXXPKKXXXXPGGGG 559
PP + P GG PPP G GG G P PG GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 562 PPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFPPP-XGXXXXFPKXWGKP 711
PPP G F P P P P P + GG PPP G P +G P
Sbjct: 66 PPPVPNG--FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP 114
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = +3
Query: 561 PPPXGXGXFFXGPXPLXPXKXPXPXXXGGGXGFSPPXXGXXXFPQKXGETPXKXFXXXGP 740
PPP G G P P+ P P GG PP G P P
Sbjct: 75 PPPPGPGG-IPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAP-QPPRP 132
Query: 741 KRAQNPKXAPXGG 779
K NP A GG
Sbjct: 133 KTPVNPALAKLGG 145
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -3
Query: 705 PPXFGEXXXXPXGGGKXXPPPPXPGXXGFXGGXGXXXPKKXXXXPGGGG 559
PP + P GG PPP G GG G P PG GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/61 (26%), Positives = 21/61 (34%)
Frame = +3
Query: 597 PXPLXPXKXPXPXXXGGGXGFSPPXXGXXXFPQKXGETPXKXFXXXGPKRAQNPKXAPXG 776
P P P P G G+ PP + Q G+ P P++ Q P G
Sbjct: 714 PYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPG 773
Query: 777 G 779
G
Sbjct: 774 G 774
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/61 (26%), Positives = 21/61 (34%)
Frame = +3
Query: 597 PXPLXPXKXPXPXXXGGGXGFSPPXXGXXXFPQKXGETPXKXFXXXGPKRAQNPKXAPXG 776
P P P P G G+ PP + Q G+ P P++ Q P G
Sbjct: 714 PYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPG 773
Query: 777 G 779
G
Sbjct: 774 G 774
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXGXXXFSPKXGGNP 712
PPPP G P PP P G PPP G P GG+P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP-PPPAGGSP 289
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXGXXXFSPKXGGNP 712
PPPP G P PP P G PPP G P GG+P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP-PPPAGGSP 310
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXGXXXFSPKXGGNP 712
PPPP G P PP P G PPP G P GG+P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP-PPPAGGSP 295
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 666 GGKXXPPPPXPGXXGFXGGXGXXXPKKXXXXPGGGG 559
GG PPPP P G GG G GGGG
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 666 GGKXXPPPPXPGXXGFXGGXGXXXPKKXXXXPGGG 562
GG PPPP P G GG G GGG
Sbjct: 106 GGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGG 140
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGG-GXXFPP 667
P P G F+ P PP P PG GG G PP
Sbjct: 222 PGPTGPKNFYITSGPPGPPGPPGPPGNPGGIGPRGPP 258
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -3
Query: 669 GGGKXXPPPPXPGXXGFXGGXGXXXPK-KXXXXP--GGGG 559
GG PPPP P G GG G P+ P GGGG
Sbjct: 25 GGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGG 64
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXX-PGXGGGGXXFPPP 670
PPPP G P P P GGGG PPP
Sbjct: 33 PPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPP 70
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 669 GGGKXXPPPPXPGXXGFXGGXGXXXPKKXXXXPGGG 562
GG PPPP P GG G P P GG
Sbjct: 25 GGCGCAPPPPPPACGCGGGGGGYAAPPPAYAAPAGG 60
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 559 PPPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFPP 666
PPPP + P PP K P P +G G PP
Sbjct: 550 PPPPPHPEEEYATPYTVPPGKQPFP-PFGEGPATPP 584
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 614 PKXPXXPGXGGGGXXFPPPXGXXXFSPKXGG 706
P P P GGGG FP G +S GG
Sbjct: 312 PCPPRTPAGGGGGGDFPAGGGGGGYSTGGGG 342
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 668 GGGKXXPPPXXXGXGXFXGGKGXGXXKKXPXXXGGGG 558
GGG PPP G G GG G G GGGG
Sbjct: 68 GGGGCAPPPAPCGGG--CGGGGGGCGGGGGGCGGGGG 102
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = -1
Query: 668 GGGKXXPPPXXXGXGXFXGG---KGXGXXKKXPXXXGGG 561
GGG PPP G G GG G G P GGG
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 668 GGGKXXPPPXXXGXGXFXGGKGXGXXKKXPXXXGGGG 558
GGG PPP G G GG G G GGGG
Sbjct: 68 GGGGCAPPPAPCGGG--CGGGGGGCGGGGGGCGGGGG 102
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = -1
Query: 668 GGGKXXPPPXXXGXGXFXGG---KGXGXXKKXPXXXGGG 561
GGG PPP G G GG G G P GGG
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 598 PXPXPPXKXPXPXXWGGGXXFPPPXG 675
P P PP P P GG PPP G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLG 796
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 563 PPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXGXXXFSPKXGGNP 712
PPP G P P G G G PP G F P G P
Sbjct: 392 PPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGP 441
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 669 GGGKXXPPPPXPGXXGFXGGXGXXXPKKXXXXPGGGG 559
GGG PP PG G G G P PG G
Sbjct: 274 GGGYGVGPPGPPGPSGRPGAPGQPGPDGQPGAPGNDG 310
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPP 670
P PG P P P PG GGG PPP
Sbjct: 287 PGDPGIDGAPGNPGSPGEPGPPGQPGAGGGCDHCPPP 323
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 675 PXGGGKXXPPPPXPGXXGFXGGXGXXXPKKXXXXPGGGGXF 553
P GG PPP P G GG G P GGG F
Sbjct: 773 PPRGGMHHMPPP-PSFRGGRGGHGGPPPPHFDRRGGGGPPF 812
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 598 PXPXPPXKXPXPXXWGGGXXFPPPXG 675
P P PP P P GG PPP G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLG 796
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 675 PXGGGKXXPPPPXPGXXGFXGG 610
P G G PPPP P G GG
Sbjct: 59 PIGYGAPPPPPPPPAFGGLGGG 80
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 675 PXGGGKXXPPPPXPGXXGFXGG 610
P G G PPPP P G GG
Sbjct: 59 PIGYGAPPPPPPPPAFGGLGGG 80
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 675 PXGGGKXXPPPPXPGXXGFXGG 610
P G G PPPP P G GG
Sbjct: 59 PIGYGAPPPPPPPPAFGGLGGG 80
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 573 GXGXFFXGPXPLXPXKXPXPXXXGGGXGFSPPXXG 677
G G + L P P P GGG G++ P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 573 GXGXFFXGPXPLXPXKXPXPXXXGGGXGFSPPXXG 677
G G + L P P P GGG G++ P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +2
Query: 560 PPPPGXXXFFXGXXXPXPPKXPXXPGXGGGGXXFPPPXGXXXFSPKXGG 706
P PPG P PP+ P G GG PP +P G
Sbjct: 119 PGPPGPDAELHDRILPVPPQCPCTAAPGLGGPPGPPGQDGIPGNPGRNG 167
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -3
Query: 675 PXGGGKXXPPPPXPGXXGFXGGXGXXXPKKXXXXPGGGGXFXXXKNXPXPP 523
P GK PP P PG G G G P PG G + P P
Sbjct: 173 PGDAGKDGPPGP-PGPDGDSGPNGEAGPNGEPGAPGKDGEKGKGEPGPAGP 222
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 711 GFPPXFGEXXXXPXGGGKXXPPPPXP 634
G PP FG P G PPPP P
Sbjct: 142 GPPPCFGPACPPPCFGPACAPPPPAP 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,113,291
Number of Sequences: 27780
Number of extensions: 190815
Number of successful extensions: 1591
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -