Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L23
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042...    29   5.1  

>11_06_0061 -
           19702893-19703869,19703960-19704098,19704166-19704287,
           19704362-19704416,19704508-19704624,19704718-19705413,
           19706358-19706393,19707190-19708236
          Length = 1062

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 29/101 (28%), Positives = 45/101 (44%)
 Frame = +3

Query: 363 ESKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISEN 542
           E+   SNT   ILK         RKKGS KE  SP N +          +      +  +
Sbjct: 636 EADSGSNTKFLILKKF------ARKKGS-KESDSPHNSLDATSTVQPIRRKKAAGRLKGS 688

Query: 543 DLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLT 665
            +  ++  ET+   + ++  KAL + LN NE+ ++ L  LT
Sbjct: 689 SVERQLEGETH---IQQQLNKALEDNLNANEVTNQELLPLT 726


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,815,041
Number of Sequences: 37544
Number of extensions: 163988
Number of successful extensions: 428
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)