Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L21
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0669 + 12779583-12779675,12779942-12780124,12780266-127804...    30   2.9  
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073...    29   6.6  
02_04_0160 - 20427774-20428217,20428301-20428402,20428503-204285...    28   8.7  

>02_02_0669 +
           12779583-12779675,12779942-12780124,12780266-12780481,
           12780590-12780952,12781453-12781612,12781724-12781827
          Length = 372

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
 Frame = +2

Query: 317 AMKLTTSTLALEAI----TLQHSYHLKQKDLIKYKKEQYVRVKKAMDTIKRLGKEPISNL 484
           A KLT ++ A+EA+    TL   +H+K + +I+ ++++YVR  +A+  I R  K P   +
Sbjct: 26  AHKLTAAS-AIEAMDVLDTLVVRFHIKGEFVIEVREKKYVRSVEALSYIAR-DKVPFGEI 83

Query: 485 QGH 493
             H
Sbjct: 84  LAH 86


>10_08_0435 +
           17905728-17905901,17906608-17906931,17907205-17907321,
           17908418-17908597,17909064-17909190,17909327-17909440,
           17909794-17909909
          Length = 383

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 233 RRAEAHLKNHRYDEAMQCHQSAAELLVDAMKLTTSTLALEAITLQHSYHLKQKDLIKYK 409
           RR EAH K   YDEA+   +   EL     +   S   LE +  +    +K++ + K K
Sbjct: 291 RRGEAHEKLEHYDEAIADMKKIIELDPSNEQAKRSLFRLEPLAAEKREKMKEEMIGKLK 349


>02_04_0160 -
           20427774-20428217,20428301-20428402,20428503-20428595,
           20428675-20428860,20428966-20429213,20429292-20429412,
           20430674-20430718,20431086-20431138,20431152-20431173
          Length = 437

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 209 LNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMKLTTSTLALE 352
           +N   Q+  R  A  +  +  +A + HQ AA LL +  KLT   L L+
Sbjct: 334 INEGAQERYRVHAQAEASQ-QQANEAHQQAAALLEEVQKLTVENLQLK 380


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,438,275
Number of Sequences: 37544
Number of extensions: 241925
Number of successful extensions: 630
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)