Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_L19
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81035-7|CAB02731.1| 333|Caenorhabditis elegans Hypothetical pr... 115 5e-26
Z82263-6|CAJ76936.1| 383|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z82263-3|CAB62793.2| 451|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z82263-2|CAE46670.1| 445|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 31 1.4
AF068717-3|AAC17762.2| 361|Caenorhabditis elegans Serpentine re... 29 3.3
AL132863-10|CAN99717.1| 181|Caenorhabditis elegans Hypothetical... 29 4.4
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 29 4.4
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 29 4.4
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 29 5.8
DQ150101-1|AAZ77787.1| 386|Caenorhabditis elegans synthetic mul... 28 7.7
AF025452-10|AAB70947.2| 386|Caenorhabditis elegans Hypothetical... 28 7.7
>Z81035-7|CAB02731.1| 333|Caenorhabditis elegans Hypothetical
protein C15H11.9 protein.
Length = 333
Score = 115 bits (276), Expect = 5e-26
Identities = 54/130 (41%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Frame = +2
Query: 407 NAQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFAXXXXXXXXX 586
N QLL N +W+L +R+EEAI+V LP T LPR K +P K TKW+++A
Sbjct: 44 NTQLLFNNIWQLEQKRVEEAIIVTLPPATYRLPREKRLPEKKEPTKWEKYAAEKGIEKRK 103
Query: 587 XXXLQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNL-DPMTDMYEKKAGEKSEKVAKN 763
+DE ++W P YG+++ + K+WLIE+P N DP D + ++ +K E+VAKN
Sbjct: 104 KDKKVFDEATKEWKPTYGYRR-GNDDTKDWLIEIPDNAEDPNKDFFAERREKKKERVAKN 162
Query: 764 ELQRLXNLAR 793
++QR+ NLAR
Sbjct: 163 DMQRMKNLAR 172
>Z82263-6|CAJ76936.1| 383|Caenorhabditis elegans Hypothetical
protein C47A4.2c protein.
Length = 383
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1
Query: 768 NSFFATFSDFSPAFFSYISVIGSKFCGTSIS 676
NSFF +DF PA +S VIG+ CGT S
Sbjct: 111 NSFFGMAADF-PAKYSNAVVIGTNICGTFTS 140
>Z82263-3|CAB62793.2| 451|Caenorhabditis elegans Hypothetical
protein C47A4.2b protein.
Length = 451
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1
Query: 768 NSFFATFSDFSPAFFSYISVIGSKFCGTSIS 676
NSFF +DF PA +S VIG+ CGT S
Sbjct: 179 NSFFGMAADF-PAKYSNAVVIGTNICGTFTS 208
>Z82263-2|CAE46670.1| 445|Caenorhabditis elegans Hypothetical
protein C47A4.2a protein.
Length = 445
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1
Query: 768 NSFFATFSDFSPAFFSYISVIGSKFCGTSIS 676
NSFF +DF PA +S VIG+ CGT S
Sbjct: 173 NSFFGMAADF-PAKYSNAVVIGTNICGTFTS 202
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 602 WDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLD-PMTDMYEKKAGEKSEKVAK 760
WDE+ ++WVP K E ++++ E N D+Y+K E EK AK
Sbjct: 93 WDEEKKEWVP----KAKQEEVNEDFIAEYQANYGVQYDDIYKKMDEELQEKAAK 142
>AF068717-3|AAC17762.2| 361|Caenorhabditis elegans Serpentine
receptor, class w protein142 protein.
Length = 361
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -1
Query: 813 WYFXXLALARXXSLCNSFFATFSDFS--PAFFSYISVIGSKFCGTSISQFFSFSAAVFLK 640
W +AL R + N + + P F I V+ FC SIS F + +F +
Sbjct: 130 WLLFSIALIRTLVIRNPMKTEYEKLTKPPTSFLAIIVVSLVFCPISISTFLEYD--IFSE 187
Query: 639 PYKGT 625
YK T
Sbjct: 188 KYKST 192
>AL132863-10|CAN99717.1| 181|Caenorhabditis elegans Hypothetical
protein Y37H2A.14 protein.
Length = 181
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 726 RKPVKNQKRLQRMNYRD-LXISLEPKX*NTKG 818
+KP K QK+L++ +YR+ + +S EP+ KG
Sbjct: 123 KKPKKTQKKLKKPSYREVVEVSTEPQTIEEKG 154
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +2
Query: 422 LNKVWELPTERIEEAI---VVRLPQPTTILPRAKPVPVPKPLTKWQEFA 559
+N V PTE A + LP P I P P P P P Q A
Sbjct: 247 INSVLSQPTEASPSAFGPPLAHLPAPVAIYPTPPPPPAPAPAAPQQASA 295
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +2
Query: 422 LNKVWELPTERIEEAI---VVRLPQPTTILPRAKPVPVPKPLTKWQEFA 559
+N V PTE A + LP P I P P P P P Q A
Sbjct: 607 INSVLSQPTEASPSAFGPPLAHLPAPVAIYPTPPPPPAPAPAAPQQASA 655
>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical protein
F31C3.3 protein.
Length = 2029
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 650 TAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVA-KNELQRLXNLARAKXXKYQ 814
T+ ++ ++++ NL D Y+K+ GEK ++ + ++ + L RAK +YQ
Sbjct: 1584 TSNSEQYEMVVDIVNNLALFVDPYKKEMGEKRRRLRFECQIMEMVEL-RAKIMRYQ 1638
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 443 PTERIEEAIVVRLPQPTTILPRAKPVPVPKP 535
P + E VV+ P ++P+A +P PKP
Sbjct: 500 PVAKTESIPVVKKPIEPVVVPKAVDIPAPKP 530
>DQ150101-1|AAZ77787.1| 386|Caenorhabditis elegans synthetic
multivulva protein LIN-8 protein.
Length = 386
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 599 QWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNEL 769
Q + + +W YGF + + + W ++ ++LD + + ++A + EKV EL
Sbjct: 139 QVEAYMWRW-EFYGFIRYYRDYTQRWEADLLKDLDVVLGLEARRASKNMEKVDSGEL 194
>AF025452-10|AAB70947.2| 386|Caenorhabditis elegans Hypothetical
protein B0454.1 protein.
Length = 386
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 599 QWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNEL 769
Q + + +W YGF + + + W ++ ++LD + + ++A + EKV EL
Sbjct: 139 QVEAYMWRW-EFYGFIRYYRDYTQRWEADLLKDLDVVLGLEARRASKNMEKVDSGEL 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,656,186
Number of Sequences: 27780
Number of extensions: 322346
Number of successful extensions: 1038
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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