BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_L17
(883 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ182013-1|ABA56305.1| 75|Anopheles gambiae G(alpha)c protein. 26 1.3
AY146716-1|AAO12076.1| 159|Anopheles gambiae odorant-binding pr... 25 4.0
DQ022108-1|AAY51996.1| 66|Anopheles gambiae voltage-gated sodi... 24 7.1
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 24 7.1
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 24 7.1
Y13592-1|CAA73920.1| 136|Anopheles gambiae voltage-gated sodium... 23 9.3
DQ263748-1|ABB84470.1| 78|Anopheles gambiae para-type sodium c... 23 9.3
DQ022109-1|AAY51997.1| 66|Anopheles gambiae voltage-gated sodi... 23 9.3
AY615653-1|AAU05110.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615652-1|AAU05109.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615651-1|AAU05108.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615650-1|AAU05107.1| 62|Anopheles gambiae sodium channel pro... 23 9.3
AY615649-1|AAU05106.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615648-1|AAU05105.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615647-1|AAU05104.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615646-1|AAU05103.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615628-1|AAU05085.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615618-1|AAU05075.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615617-1|AAU05074.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615616-1|AAU05073.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615615-1|AAU05072.1| 69|Anopheles gambiae sodium channel pro... 23 9.3
AY615614-1|AAU05071.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615612-1|AAU05069.1| 69|Anopheles gambiae sodium channel pro... 23 9.3
AY615610-1|AAU05067.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615609-1|AAU05066.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615608-1|AAU05065.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AY615571-1|AAU05028.1| 62|Anopheles gambiae sodium channel pro... 23 9.3
AY615570-1|AAU05027.1| 71|Anopheles gambiae sodium channel pro... 23 9.3
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 9.3
>DQ182013-1|ABA56305.1| 75|Anopheles gambiae G(alpha)c protein.
Length = 75
Score = 26.2 bits (55), Expect = 1.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 107 YIDEFGQTTTRMQ*KKCFICEICDAIALFVT 199
++D GQ T R + KCF C + + L T
Sbjct: 13 FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43
>AY146716-1|AAO12076.1| 159|Anopheles gambiae odorant-binding
protein AgamOBP12 protein.
Length = 159
Score = 24.6 bits (51), Expect = 4.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 453 LRYPLILWITVLPPLSELIP 394
+RY +LW+ +L +S L+P
Sbjct: 4 VRYHFVLWLLILIGVSSLVP 23
>DQ022108-1|AAY51996.1| 66|Anopheles gambiae voltage-gated sodium
channel protein.
Length = 66
Score = 23.8 bits (49), Expect = 7.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG*GAAVGL 794
GD SC+P L T+V G + L
Sbjct: 35 GDVSCIPFFLATVVIGNSVVLNL 57
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 23.8 bits (49), Expect = 7.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 715 RKRHASRREKGGQVSGKRQGRKQESARGS 629
RKR ++ + Q G + RK+++ RGS
Sbjct: 937 RKRKGEKKPRKSQGGGGSRKRKEKARRGS 965
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.8 bits (49), Expect = 7.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 187 SNSITNFTNKAFFSLHS 137
SN+I NFT KAF L S
Sbjct: 520 SNNIENFTRKAFKDLPS 536
>Y13592-1|CAA73920.1| 136|Anopheles gambiae voltage-gated sodium
channel protein.
Length = 136
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 87 GDVSCIPFFLATVVIG 102
>DQ263748-1|ABB84470.1| 78|Anopheles gambiae para-type sodium
channel variant 1 protein.
Length = 78
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 41 GDVSCIPFFLATVVIG 56
>DQ022109-1|AAY51997.1| 66|Anopheles gambiae voltage-gated sodium
channel protein.
Length = 66
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 35 GDVSCIPFFLATVVIG 50
>AY615653-1|AAU05110.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615652-1|AAU05109.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615651-1|AAU05108.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615650-1|AAU05107.1| 62|Anopheles gambiae sodium channel
protein.
Length = 62
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615649-1|AAU05106.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615648-1|AAU05105.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615647-1|AAU05104.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615646-1|AAU05103.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615628-1|AAU05085.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615618-1|AAU05075.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615617-1|AAU05074.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615616-1|AAU05073.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615615-1|AAU05072.1| 69|Anopheles gambiae sodium channel
protein.
Length = 69
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615614-1|AAU05071.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615612-1|AAU05069.1| 69|Anopheles gambiae sodium channel
protein.
Length = 69
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615610-1|AAU05067.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615609-1|AAU05066.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615608-1|AAU05065.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615571-1|AAU05028.1| 62|Anopheles gambiae sodium channel
protein.
Length = 62
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AY615570-1|AAU05027.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 44 GDVSCIPFFLATVVIG 59
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.4 bits (48), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GDKSCLPGXLKTIVTG 815
GD SC+P L T+V G
Sbjct: 1002 GDVSCIPFFLATVVIG 1017
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,532
Number of Sequences: 2352
Number of extensions: 17566
Number of successful extensions: 52
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -