Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L17
         (883 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2272|AAN11836.1|  626|Drosophila melanogaster CG32121-P...    32   1.2  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.5  
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ...    29   8.5  
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC...    29   8.5  
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB...    29   8.5  
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA...    29   8.5  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.5  

>AE014296-2272|AAN11836.1|  626|Drosophila melanogaster CG32121-PA
           protein.
          Length = 626

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 27/78 (34%), Positives = 35/78 (44%)
 Frame = +3

Query: 648 CFRPCRLPDTCPPFSLREAWRFLIAHAVCISVRCRSFAPSWAVCTNPPFSPTAAPYPVTI 827
           CF   RL    PP  LR   + L+ +    S    S + S   C+NP  +P  A  PVT 
Sbjct: 260 CFGSKRLKGDSPPKELRRLEKSLLKNPKSSSTTNSSSSKSPQECSNP--NPIVATSPVT- 316

Query: 828 VLSXPGKHDLSPWQQPLV 881
            L+ P     SP Q P+V
Sbjct: 317 -LAPPTMAHFSP-QLPVV 332


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 295 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 390
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
            protein SMRTER protein.
          Length = 3469

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 709  RHASRREKGGQVSGKRQGRKQESARGSFQGETPG 608
            +H   + KGGQ  G++QG+ Q   +G  QG+TPG
Sbjct: 1854 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 1883


>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
            isoform C protein.
          Length = 3604

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 709  RHASRREKGGQVSGKRQGRKQESARGSFQGETPG 608
            +H   + KGGQ  G++QG+ Q   +G  QG+TPG
Sbjct: 1989 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 2018


>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
            isoform B protein.
          Length = 3604

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 709  RHASRREKGGQVSGKRQGRKQESARGSFQGETPG 608
            +H   + KGGQ  G++QG+ Q   +G  QG+TPG
Sbjct: 1989 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 2018


>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
            isoform A protein.
          Length = 3604

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 709  RHASRREKGGQVSGKRQGRKQESARGSFQGETPG 608
            +H   + KGGQ  G++QG+ Q   +G  QG+TPG
Sbjct: 1989 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 2018


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 295 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 390
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,070,244
Number of Sequences: 53049
Number of extensions: 844380
Number of successful extensions: 2493
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2489
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)