Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_L14
(922 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 107 5e-22
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 68 3e-10
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 64 5e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 52 3e-05
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.022
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 41 0.039
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 40 0.12
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.12
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 36 1.9
UniRef50_A7HEY8 Cluster: Putative uncharacterized protein; n=4; ... 34 5.9
UniRef50_A1A2V5 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 107 bits (256), Expect = 5e-22
Identities = 62/123 (50%), Positives = 65/123 (52%)
Frame = +2
Query: 551 SKRPGTVKRPRCWRFSIGSXPLTSITKIDAQVXGGEXRXDYKXTRRFPLXAXXVXXXXXX 730
SK+ T R RFSIGS PLTSITKIDAQV GGE R DYK TRRFPL A
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 731 XXXXXXXXXXXXXXGKXWRFLIXHAVGISXRCRSFAPXWGCVHXPPVQPXRXXFXRVXXV 910
+ WRFLI HAVGIS RCRSFAP W PP P + V V
Sbjct: 62 CRLPDTCPPFSLR--EAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYP-VTIV 118
Query: 911 LXP 919
L P
Sbjct: 119 LSP 121
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 68.1 bits (159), Expect = 3e-10
Identities = 33/45 (73%), Positives = 35/45 (77%)
Frame = +2
Query: 569 VKRPRCWRFSIGSXPLTSITKIDAQVXGGEXRXDYKXTRRFPLXA 703
V+ PR RFSIGS PLTSITK DAQ+ GGE R DYK TRRFPL A
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAA 88
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 64.1 bits (149), Expect = 5e-09
Identities = 31/43 (72%), Positives = 32/43 (74%)
Frame = +2
Query: 575 RPRCWRFSIGSXPLTSITKIDAQVXGGEXRXDYKXTRRFPLXA 703
RPR RFSIGS PLTSI K DAQ+ GGE R DYK RRFPL A
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVA 120
Score = 50.0 bits (114), Expect = 8e-05
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 384 RGEAVCVLGALPXPRSLTRCARSFGCGERYXLT 482
R +C G +P PRSLTR ARSFGCGERY LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 360 CINESANARGEAVCVLGALPXPRSLTRCARSFGCGERYXL-TQRR*YGYPQNQGITQ 527
CI + A AR EAV VL ALP RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 51.6 bits (118), Expect = 3e-05
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -3
Query: 545 LLTCSFLRYPLILWITVLPPLSEXIPL 465
LLTCSF YPLILWITVLPPLSE PL
Sbjct: 24 LLTCSFRLYPLILWITVLPPLSELTPL 50
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 44.4 bits (100), Expect = 0.004
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -1
Query: 922 GGXQNXXYPXKGXXXXLNGGXVHTAPXWXERPTPX*DTYSVXYEKAPXFPEREK 761
G Q+ Y KG G +P W ERP P DT SV YEKAP FP+ +K
Sbjct: 9 GWTQDDSY-RKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKK 61
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.022
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +1
Query: 328 RFRVEVWEVFSALMNRPTRGERRFAYW 408
RF V V +ALMNRPTRGERRFAYW
Sbjct: 15 RFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 41.1 bits (92), Expect = 0.039
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +1
Query: 736 PXTGYLSALFPFREXVALSHXSRCRYLXSV 825
P TGYLSA P VALSH SRCRYL SV
Sbjct: 9 PLTGYLSAFLPSGS-VALSHSSRCRYLSSV 37
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 39.5 bits (88), Expect = 0.12
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 485 KAVIRLSTESGDNAGKNM 538
KAVIRLSTESGDNAGKNM
Sbjct: 42 KAVIRLSTESGDNAGKNM 59
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.5 bits (88), Expect = 0.12
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -1
Query: 412 APNTQTASPRALADSLMQ 359
APNTQTASPRALADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 35.5 bits (78), Expect = 1.9
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +2
Query: 809 GISXRCRSFAPXWGCVHXPPVQP 877
GIS RCRSFAP W PP P
Sbjct: 76 GISARCRSFAPSWAVSKNPPFSP 98
>UniRef50_A7HEY8 Cluster: Putative uncharacterized protein; n=4;
Bacteria|Rep: Putative uncharacterized protein -
Anaeromyxobacter sp. Fw109-5
Length = 73
Score = 33.9 bits (74), Expect = 5.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 578 AFLRFLAFCWPLLTCSFLRYPLILWITVLP 489
A+L L CWPL + + YPL+ W+ +LP
Sbjct: 6 AWLVLLVLCWPLALAALIVYPLV-WLVLLP 34
>UniRef50_A1A2V5 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis ATCC 15703|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
(strain ATCC 15703 / DSM 20083)
Length = 174
Score = 33.5 bits (73), Expect = 7.8
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +1
Query: 598 HRLRP-PDEHHKNRRSSXRWRXPTXL*XYQAFPPXSXXRAPSWSRPXPXTGYLSALFPFR 774
HRL+P P+ H ++R S + R P R W+R P G + R
Sbjct: 80 HRLQPSPELHPRHRPSDTQGRGPQSEESRDRRAQGHFGRLHDWNRRDPWFGQSDHIRTIR 139
Query: 775 EXVALSHXSRCRYL 816
AL RC YL
Sbjct: 140 HRTALDTRPRCDYL 153
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,589,545
Number of Sequences: 1657284
Number of extensions: 8423632
Number of successful extensions: 17117
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17106
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84441173866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -