Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_L13
(894 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4153 Cluster: PREDICTED: similar to myd88; n=1... 49 1e-04
UniRef50_UPI0000DB6E47 Cluster: PREDICTED: similar to Myd88 CG20... 49 1e-04
UniRef50_Q7Q9F4 Cluster: ENSANGP00000015749; n=1; Anopheles gamb... 46 0.001
UniRef50_Q0IEX0 Cluster: Myd88; n=1; Aedes aegypti|Rep: Myd88 - ... 42 0.028
UniRef50_UPI0000D558C7 Cluster: PREDICTED: similar to myeloid di... 40 0.065
UniRef50_A5HJQ9 Cluster: Myd88; n=1; Branchiostoma belcheri|Rep:... 36 1.4
UniRef50_Q99836 Cluster: Myeloid differentiation primary respons... 36 1.8
UniRef50_A7RHZ4 Cluster: Predicted protein; n=1; Nematostella ve... 35 3.2
UniRef50_A6QVC2 Cluster: Predicted protein; n=2; Onygenales|Rep:... 33 9.8
UniRef50_Q9ULW6 Cluster: Nucleosome assembly protein 1-like 2; n... 33 9.8
>UniRef50_UPI00015B4153 Cluster: PREDICTED: similar to myd88; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to myd88 -
Nasonia vitripennis
Length = 417
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Frame = +1
Query: 649 IDDDEGYEQHYDAFVLYADEDREFVEEMINRL--GGMFQICTKEK-LLPSHSTEY 804
I+ EG +QHYDAF+LYA+ED EF +EMI L ++C KE+ L+P S E+
Sbjct: 144 IERGEG-KQHYDAFLLYANEDEEFAQEMIENLEKKNHLKLCLKERDLVPGLSFEH 197
>UniRef50_UPI0000DB6E47 Cluster: PREDICTED: similar to Myd88
CG2078-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Myd88 CG2078-PA - Apis mellifera
Length = 379
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
Frame = +1
Query: 616 ISNEDVYVPITIDD----DEGY-EQHYDAFVLYADEDREFVEEMINRLGGMF--QICTKE 774
I N+ +TIDD ++G EQ+YDAF+LYADED +F EM+++L + ++C K+
Sbjct: 75 IENDTEIEILTIDDFYRKEQGLSEQNYDAFILYADEDIKFANEMVDKLEKEYNLKLCLKD 134
Query: 775 KLLPSHSTEY 804
+LL + E+
Sbjct: 135 QLLGGITFEH 144
Score = 34.7 bits (76), Expect = 3.2
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 812 VAQLISQRCQYIILVYSPXXLKSPAN 889
V +LIS RC +I++ SP LKSPAN
Sbjct: 147 VMKLISDRCNRLIVIISPNFLKSPAN 172
>UniRef50_Q7Q9F4 Cluster: ENSANGP00000015749; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000015749 - Anopheles gambiae
str. PEST
Length = 410
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 574 AFEGGQVAIKHNDIISNEDVYVPITIDDDEGYEQHYDAFVLYADEDREFVEEMINRLGGM 753
A G + + + ++ D+ IT DD ++Q YDAF+L+AD D EF +M+++L
Sbjct: 143 AQRGRETEATESKVSADSDI---ITRDDTSDHKQQYDAFILFADADIEFASKMVDKLEAR 199
Query: 754 -FQICTKEK 777
Q+C +++
Sbjct: 200 GLQLCLRDR 208
>UniRef50_Q0IEX0 Cluster: Myd88; n=1; Aedes aegypti|Rep: Myd88 -
Aedes aegypti (Yellowfever mosquito)
Length = 435
Score = 41.5 bits (93), Expect = 0.028
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 598 IKHNDIISNEDVYVPITIDDDEGYEQHYDAFVLYADEDREFVEEMINRL-GGMFQICTKE 774
++ I ++ED+ IT DD +Q YDAF+L+AD D EF +++ R+ +IC K+
Sbjct: 136 LEETSIGADEDI---ITKDDTRQNKQFYDAFILFADADIEFATKIMERMEERKLKICIKD 192
Query: 775 K 777
+
Sbjct: 193 R 193
>UniRef50_UPI0000D558C7 Cluster: PREDICTED: similar to myeloid
differentiation primary response gene 88; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to myeloid
differentiation primary response gene 88 - Tribolium
castaneum
Length = 400
Score = 40.3 bits (90), Expect = 0.065
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 264 TSQMXSCLLXXKKIIPXXGPDKLPXXWRGLASLVGISSQEAGSIHQCSNKXDKVLEIWQR 443
T + LL + +P GP+ + WRGLA L IS S+ SN DKVL++W
Sbjct: 19 TKALLCDLLNPQMFMP--GPNGVLRYWRGLAGLCQISPNYEASLVNDSNPTDKVLQLWYE 76
Query: 444 NGSP--TVGQLL 473
TV QLL
Sbjct: 77 KDPQRCTVQQLL 88
Score = 34.3 bits (75), Expect = 4.3
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Frame = +1
Query: 613 IISNEDVYVPITIDD----DEGYE-QHYDAFVLYADEDREFVEEMINRLGGMF--QICTK 771
+ S D Y+ IT DD +EG + + YDAF+LY +D EF E+++R+ + + C K
Sbjct: 126 LYSEADKYI-ITTDDVIRINEGRDLEIYDAFLLYDHDDIEFAIELLDRMEKEYGMKFCVK 184
Query: 772 EK 777
++
Sbjct: 185 DR 186
>UniRef50_A5HJQ9 Cluster: Myd88; n=1; Branchiostoma belcheri|Rep:
Myd88 - Branchiostoma belcheri (Amphioxus)
Length = 295
Score = 35.9 bits (79), Expect = 1.4
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 8/56 (14%)
Frame = +1
Query: 643 ITIDDDE-GYEQH-YDAFVLYADEDREFVEEMINRL-----GGMFQICTKEK-LLP 786
IT+ DD G ++ +DA+V Y EDR+FV +M+ RL G ++C ++ LLP
Sbjct: 146 ITLQDDPYGVDKELFDAYVCYCKEDRDFVIQMVKRLESSEFGRRLKLCIDDRDLLP 201
>UniRef50_Q99836 Cluster: Myeloid differentiation primary response
protein MyD88; n=41; Euteleostomi|Rep: Myeloid
differentiation primary response protein MyD88 - Homo
sapiens (Human)
Length = 296
Score = 35.5 bits (78), Expect = 1.8
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 589 QVAIKHNDIISNEDVYVPITIDDDEGY-EQHYDAFVLYADEDREFVEEMINRL 744
QVA + + ++ T+DD G+ + +DAF+ Y D +FV+EMI +L
Sbjct: 130 QVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICYCPSDIQFVQEMIRQL 182
>UniRef50_A7RHZ4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 245
Score = 34.7 bits (76), Expect = 3.2
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 670 EQHYDAFVLYADEDREFVEEMINRLGG 750
++ YDAFV YA ED EFV++++ ++ G
Sbjct: 103 DEMYDAFVCYAPEDVEFVKQLLQKMEG 129
>UniRef50_A6QVC2 Cluster: Predicted protein; n=2; Onygenales|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 313
Score = 33.1 bits (72), Expect = 9.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 541 YVFSDHLSHHHVHQICPNAAEISRSWPTVGDPFLCHI 431
+++ + H + QI PN +ISR W ++G L H+
Sbjct: 274 WMYWSRIMKHFLEQIIPNNTDISRYWVSIGTSVLMHL 310
>UniRef50_Q9ULW6 Cluster: Nucleosome assembly protein 1-like 2;
n=15; Eutheria|Rep: Nucleosome assembly protein 1-like 2
- Homo sapiens (Human)
Length = 460
Score = 33.1 bits (72), Expect = 9.8
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 604 HNDIISNEDVYVPITIDDDEGYEQHYDAFVLYADEDRE 717
H ++ NE+ V +D+D+GYE +Y + + +E+ E
Sbjct: 182 HEEMYGNEEGMVHEYVDEDDGYEDYYYDYAVEEEEEEE 219
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,700,391
Number of Sequences: 1657284
Number of extensions: 11079537
Number of successful extensions: 26693
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26678
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -