Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_L10
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 41 0.001
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 41 0.001
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 41 0.001
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.004
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.004
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.004
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 39 0.006
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 36 0.031
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 35 0.072
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 0.14
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 0.14
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.40
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 0.42
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.51
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.51
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.67
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 31 1.2
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 31 1.2
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 31 1.2
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 31 1.2
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 31 1.2
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.2
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.2
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 31 1.6
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 31 1.6
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.7
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 30 2.7
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 30 2.7
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 30 2.7
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 30 2.7
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.6
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 4.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 4.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 4.7
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 29 4.7
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.3
U80437-4|AAK68244.1| 90|Caenorhabditis elegans Neurabin protei... 29 6.3
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 29 6.3
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 29 6.3
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 29 6.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.3
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 6.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 6.3
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 25 7.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.3
AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin pr... 28 8.3
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 8.3
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 8.3
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.3
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 8.3
AF067617-3|ABQ13062.1| 102|Caenorhabditis elegans Uncoordinated... 28 8.3
AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated... 28 8.3
AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated... 28 8.3
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/89 (30%), Positives = 27/89 (30%)
Frame = -2
Query: 833 GGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXX 654
GG P P PP GG PGG P PPPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPP 759
Query: 653 XXXXXXXXXXXGXXXPPPGGGXXXPPPPP 567
PPPGG PPPPP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/85 (31%), Positives = 27/85 (31%), Gaps = 5/85 (5%)
Frame = -2
Query: 794 PXGGAPPPXXG-----GXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXX 630
P G PPP G G P GG PP PPPPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 629 XXXGXXXPPPGGGXXXPPPPPXXXG 555
PPPGG PPPP G
Sbjct: 768 CPPPPPPPPPGG-FKGGPPPPPPPG 791
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 8/85 (9%)
Frame = -2
Query: 782 APPPXXGGXFXXXXPGGGGPPX--------XXXPPPPPXXXXXXXXXXXXXXXXXXXXXX 627
AP GG GG PP PPPPP
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 754
Query: 626 XXGXXXPPPGGGXXXPPPPPXXXGG 552
G PPP G PPPPP GG
Sbjct: 755 SGGPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/89 (30%), Positives = 27/89 (30%)
Frame = -2
Query: 833 GGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXX 654
GG P P PP GG PGG P PPPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPP 759
Query: 653 XXXXXXXXXXXGXXXPPPGGGXXXPPPPP 567
PPPGG PPPPP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/85 (31%), Positives = 27/85 (31%), Gaps = 5/85 (5%)
Frame = -2
Query: 794 PXGGAPPPXXG-----GXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXX 630
P G PPP G G P GG PP PPPPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 629 XXXGXXXPPPGGGXXXPPPPPXXXG 555
PPPGG PPPP G
Sbjct: 768 CPPPPPPPPPGG-FKGGPPPPPPPG 791
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 8/85 (9%)
Frame = -2
Query: 782 APPPXXGGXFXXXXPGGGGPPX--------XXXPPPPPXXXXXXXXXXXXXXXXXXXXXX 627
AP GG GG PP PPPPP
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 754
Query: 626 XXGXXXPPPGGGXXXPPPPPXXXGG 552
G PPP G PPPPP GG
Sbjct: 755 SGGPPPPPPPPGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/89 (30%), Positives = 27/89 (30%)
Frame = -2
Query: 833 GGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXX 654
GG P P PP GG PGG P PPPPP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPP 342
Query: 653 XXXXXXXXXXXGXXXPPPGGGXXXPPPPP 567
PPPGG PPPPP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/85 (31%), Positives = 27/85 (31%), Gaps = 5/85 (5%)
Frame = -2
Query: 794 PXGGAPPPXXG-----GXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXX 630
P G PPP G G P GG PP PPPPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 629 XXXGXXXPPPGGGXXXPPPPPXXXG 555
PPPGG PPPP G
Sbjct: 351 CPPPPPPPPPGG-FKGGPPPPPPPG 374
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 8/85 (9%)
Frame = -2
Query: 782 APPPXXGGXFXXXXPGGGGPPX--------XXXPPPPPXXXXXXXXXXXXXXXXXXXXXX 627
AP GG GG PP PPPPP
Sbjct: 278 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 337
Query: 626 XXGXXXPPPGGGXXXPPPPPXXXGG 552
G PPP G PPPPP GG
Sbjct: 338 SGGPPPPPPPPGGCPPPPPPPPPGG 362
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = -2
Query: 794 PXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGX 615
P G+PPP G G PP PPPP
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 318
Query: 614 XXPPPGGGXXXPPPP 570
PPP G PPPP
Sbjct: 319 GSPPPAGTGSPPPPP 333
Score = 35.5 bits (78), Expect = 0.055
Identities = 24/81 (29%), Positives = 24/81 (29%), Gaps = 7/81 (8%)
Frame = -2
Query: 788 GGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGXXX 609
G PPP G G PP PPPPP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 312
Query: 608 PPP--GG-----GXXXPPPPP 567
PPP GG G PPPPP
Sbjct: 313 PPPQAGGSPPPAGTGSPPPPP 333
Score = 34.7 bits (76), Expect = 0.095
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = -2
Query: 794 PXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGX 615
P G+PPP G G PP PPP G
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPP----PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Query: 614 XXPPPGGGXXXPPPPP 567
PPP G PPPPP
Sbjct: 288 SPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = -2
Query: 794 PXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGX 615
P G+PPP G G PP PPPP
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 339
Query: 614 XXPPPGGGXXXPPPP 570
PPP G PPPP
Sbjct: 340 GSPPPAGTGSPPPPP 354
Score = 35.5 bits (78), Expect = 0.055
Identities = 24/81 (29%), Positives = 24/81 (29%), Gaps = 7/81 (8%)
Frame = -2
Query: 788 GGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGXXX 609
G PPP G G PP PPPPP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 333
Query: 608 PPP--GG-----GXXXPPPPP 567
PPP GG G PPPPP
Sbjct: 334 PPPQAGGSPPPAGTGSPPPPP 354
Score = 34.7 bits (76), Expect = 0.095
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = -2
Query: 794 PXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGX 615
P G+PPP G G PP PPP G
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPP----PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Query: 614 XXPPPGGGXXXPPPPP 567
PPP G PPPPP
Sbjct: 309 SPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = -2
Query: 794 PXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGX 615
P G+PPP G G PP PPPP
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 324
Query: 614 XXPPPGGGXXXPPPP 570
PPP G PPPP
Sbjct: 325 GSPPPAGTGSPPPPP 339
Score = 35.5 bits (78), Expect = 0.055
Identities = 24/81 (29%), Positives = 24/81 (29%), Gaps = 7/81 (8%)
Frame = -2
Query: 788 GGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGXXX 609
G PPP G G PP PPPPP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 318
Query: 608 PPP--GG-----GXXXPPPPP 567
PPP GG G PPPPP
Sbjct: 319 PPPQAGGSPPPAGTGSPPPPP 339
Score = 34.7 bits (76), Expect = 0.095
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = -2
Query: 794 PXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGX 615
P G+PPP G G PP PPP G
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPP----PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Query: 614 XXPPPGGGXXXPPPPP 567
PPP G PPPPP
Sbjct: 294 SPPPPRAGSPPPPPPP 309
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/81 (28%), Positives = 23/81 (28%)
Frame = -2
Query: 788 GGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGXXX 609
GG PPP P GPP PPP G
Sbjct: 365 GGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYG 424
Query: 608 PPPGGGXXXPPPPPXXXGGXG 546
PP GG PPPP G G
Sbjct: 425 PPQGGPGGFGPPPPGGPGAYG 445
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/90 (28%), Positives = 26/90 (28%), Gaps = 1/90 (1%)
Frame = -2
Query: 812 PRXXXXPXGGAPPPXX-GGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXX 636
P P APPP G PGG GPP PP P
Sbjct: 381 PPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPP----PPGGPGAPGSYGPPQGGPGGFGPP 436
Query: 635 XXXXXGXXXPPPGGGXXXPPPPPXXXGGXG 546
G PPP G PPP G G
Sbjct: 437 PPGGPGAYGPPPTGFPPVGAPPPGAAGAPG 466
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 36.3 bits (80), Expect = 0.031
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 7/85 (8%)
Frame = -2
Query: 779 PPPXXGGXFXXXXPGGGGPPXXXXPPP-------PPXXXXXXXXXXXXXXXXXXXXXXXX 621
PPP G P G GPP PP PP
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPM 767
Query: 620 GXXXPPPGGGXXXPPPPPXXXGGXG 546
PPP GG PPPP GG G
Sbjct: 768 SSFPPPPRGGMHHMPPPPSFRGGRG 792
Score = 30.3 bits (65), Expect = 2.1
Identities = 30/107 (28%), Positives = 30/107 (28%), Gaps = 16/107 (14%)
Frame = -2
Query: 818 GXPRXXXXPXG-------GAPPPXX--GGXFXXXXPGGGGPPXXXXPP-------PPPXX 687
G PR P G APPP G PG G PP PP PPP
Sbjct: 687 GQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPM 746
Query: 686 XXXXXXXXXXXXXXXXXXXXXXGXXXPPPGGGXXXPPPPPXXXGGXG 546
PP GG PPPP G G
Sbjct: 747 FQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGG 793
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 35.1 bits (77), Expect = 0.072
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -2
Query: 857 GGTXXXXGG--GXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG GG G RGG P PPP GG GPP PPPP
Sbjct: 1557 GGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
Score = 34.3 bits (75), Expect = 0.13
Identities = 24/68 (35%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Frame = -2
Query: 893 RGXXXGXXXXXXGGTXXXXGGGX--RGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPP 720
RG G GG GG RGG P G PPP G P G PP
Sbjct: 1552 RGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLG------MPPPGPPP 1605
Query: 719 XXXXPPPP 696
PPPP
Sbjct: 1606 PNGGPPPP 1613
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = -2
Query: 824 RGGXP--RXXXXPXGGAPPPXXGG--XFXXXXPGGGGPPXXXXPPPPP 693
RGG P R P G PPP GG P GGPP PP P
Sbjct: 1465 RGGPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPPMFRGGPPGP 1512
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = -2
Query: 833 GGXRGGXPRXXXXPXG--GAPPPXXGGXFXXXXPG--GGGPPXXXXPPPPP 693
G GG P G G PPP GG P GG PP PPP P
Sbjct: 1553 GPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGP 1603
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.1 bits (67), Expect(2) = 0.14
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = -2
Query: 836 GGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
G G GG GG PP + GG PPPPP
Sbjct: 20 GAGSAGGCCPPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPP 67
Score = 21.8 bits (44), Expect(2) = 0.14
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 581 PPPPPXXXGG 552
PPPPP GG
Sbjct: 66 PPPPPAPIGG 75
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.1 bits (67), Expect(2) = 0.14
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = -2
Query: 836 GGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
G G GG GG PP + GG PPPPP
Sbjct: 20 GAGSAGGCCPPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPP 67
Score = 21.8 bits (44), Expect(2) = 0.14
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 581 PPPPPXXXGG 552
PPPPP GG
Sbjct: 66 PPPPPAPIGG 75
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGG 726
GG G G +GG P G PPP GG PGG G
Sbjct: 458 GGMGGPPGHGGQGGPPGHGGM---GGPPPGQGGPGGPGGPGGPG 498
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -2
Query: 821 GGXPRXXXXPXGGAPPPXXGGXFXXXXPGG-GGPPXXXXPPPPP 693
GG PR GG PP GG GG GGPP PP
Sbjct: 441 GGDPRGPPGGMGG--PPGHGGMGGPPGHGGQGGPPGHGGMGGPP 482
Score = 26.6 bits (56), Expect(2) = 0.40
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = -2
Query: 785 GAPPPXXGGXFXXXXPGG-GGPPXXXXPPPPP 693
G PP GG PGG GGPP PP
Sbjct: 433 GPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPP 464
Score = 24.6 bits (51), Expect(2) = 0.40
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 608 PPPGGGXXXPPPPPXXXGGXG 546
PP GG PPP GG G
Sbjct: 472 PPGHGGMGGPPPGQGGPGGPG 492
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGG 726
GG G G +GG P G PPP GG PGG G
Sbjct: 178 GGMGGPPGHGGQGGPPGHGGM---GGPPPGQGGPGGPGGPGGPG 218
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -2
Query: 821 GGXPRXXXXPXGGAPPPXXGGXFXXXXPGG-GGPPXXXXPPPPP 693
GG PR GG PP GG GG GGPP PP
Sbjct: 161 GGDPRGPPGGMGG--PPGHGGMGGPPGHGGQGGPPGHGGMGGPP 202
Score = 26.6 bits (56), Expect(2) = 0.42
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = -2
Query: 785 GAPPPXXGGXFXXXXPGG-GGPPXXXXPPPPP 693
G PP GG PGG GGPP PP
Sbjct: 153 GPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPP 184
Score = 24.6 bits (51), Expect(2) = 0.42
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 608 PPPGGGXXXPPPPPXXXGGXG 546
PP GG PPP GG G
Sbjct: 192 PPGHGGMGGPPPGQGGPGGPG 212
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.51
Identities = 26/94 (27%), Positives = 26/94 (27%), Gaps = 9/94 (9%)
Frame = -2
Query: 821 GGXPRXXXXPXGGAP-PPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXX 645
G P P G P PP G P GPP PPPP
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Query: 644 XXXXXXXXGXXXPPP--------GGGXXXPPPPP 567
PPP G G PPPPP
Sbjct: 354 RYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.51
Identities = 26/94 (27%), Positives = 26/94 (27%), Gaps = 9/94 (9%)
Frame = -2
Query: 821 GGXPRXXXXPXGGAP-PPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXX 645
G P P G P PP G P GPP PPPP
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Query: 644 XXXXXXXXGXXXPPP--------GGGXXXPPPPP 567
PPP G G PPPPP
Sbjct: 364 RYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.67
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = -2
Query: 809 RXXXXPXG-GAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXX 633
R P G G PPP G G G PPPPP
Sbjct: 32 RPPPPPKGTGTPPPPPTGE-PQDLSGEGNASRR--PPPPPKGTGTPPPPPTGEPQDLSAE 88
Query: 632 XXXXGXXXPPPGGGXXXPPPPP 567
PPP G PPPPP
Sbjct: 89 EGNASRRPPPPPKGTGTPPPPP 110
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/90 (25%), Positives = 23/90 (25%)
Frame = -2
Query: 836 GGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXX 657
G G P G PPP G G PPPPP
Sbjct: 119 GEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNAS----RRPPPPPKGTGSPPPPPTG 174
Query: 656 XXXXXXXXXXXXGXXXPPPGGGXXXPPPPP 567
PPP G PPPPP
Sbjct: 175 EPQDLSTEGNASRRPPPPPKG-TGTPPPPP 203
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/76 (26%), Positives = 20/76 (26%), Gaps = 5/76 (6%)
Frame = -2
Query: 779 PPPXXGGXFXXXXPGG-----GGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGX 615
PPP G P G G PPPP
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASR 156
Query: 614 XXPPPGGGXXXPPPPP 567
PPP G PPPPP
Sbjct: 157 RPPPPPKGTGSPPPPP 172
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.89
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 836 GGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GGG GG G APPP G GG G PPP P
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG GGG G GG GG + PP PPPPP
Sbjct: 261 GGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAP---AAAPPPPPPPPPPP 312
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.89
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 836 GGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GGG GG G APPP G GG G PPP P
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG GGG G GG GG + PP PPPPP
Sbjct: 261 GGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAP---AAAPPPPPPPPPPP 312
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = -2
Query: 779 PPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGXXXPPP 600
PPP G F PG GG PPPPP PPP
Sbjct: 66 PPPVPNG-FIPPPPGPGG-----IPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
Query: 599 GGGXXXPPPPP 567
G P PP
Sbjct: 120 PSGLGVAPQPP 130
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 608 PPPGGGXXXPPPPPXXXGG 552
PPP G PPPPP GG
Sbjct: 75 PPPPGPGGIPPPPPMFAGG 93
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -2
Query: 821 GGXPRXXXXPXGGAPP-PXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG P GG PP P G P G PP PPPPP
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPP----PPPPP 120
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGP---PXXXXPPPPP 693
GG GG GG PPP GG GGGG P PPPPP
Sbjct: 50 GGFNNYGNGGGFGGNN------YNNGPPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPP 101
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXP-RXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG G G P R G P P GG F PG G P P PP
Sbjct: 328 GGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPP 383
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXP-RXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG G G P R G P P GG F PG G P P PP
Sbjct: 327 GGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPP 382
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXP-RXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG G G P R G P P GG F PG G P P PP
Sbjct: 327 GGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPP 382
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXP-RXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG G G P R G P P GG F PG G P P PP
Sbjct: 328 GGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPP 383
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXP-RXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG G G P R G P P GG F PG G P P PP
Sbjct: 364 GGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPP 419
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 788 GGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG P GG PGGGG PP PP
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPP 646
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 788 GGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG PP GG GGGGP PP PP
Sbjct: 624 GGGPPRGPGGG------GGGGPTGPPAPPKPP 649
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 556 PXXXGGGGGXXXPPPGGG 609
P GGGGG P GGG
Sbjct: 618 PGGPGGGGGPPRGPGGGG 635
Score = 24.2 bits (50), Expect(2) = 1.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 694 GGGGGXXXXGGPPPP 738
GGGGG G P PP
Sbjct: 632 GGGGGGGPTGPPAPP 646
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 788 GGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG P GG PGGGG PP PP
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPP 646
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 788 GGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG PP GG GGGGP PP PP
Sbjct: 624 GGGPPRGPGGG------GGGGPTGPPAPPKPP 649
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 556 PXXXGGGGGXXXPPPGGG 609
P GGGGG P GGG
Sbjct: 618 PGGPGGGGGPPRGPGGGG 635
Score = 24.2 bits (50), Expect(2) = 1.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 694 GGGGGXXXXGGPPPP 738
GGGGG G P PP
Sbjct: 632 GGGGGGGPTGPPAPP 646
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 608 PPPGGGXXXPPPPPXXXGGXG 546
PP G G PPPPP GG G
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLG 78
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 608 PPPGGGXXXPPPPPXXXGGXG 546
PP G G PPPPP GG G
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLG 78
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 608 PPPGGGXXXPPPPPXXXGGXG 546
PP G G PPPPP GG G
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLG 78
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGG 726
GG+ GGG RGG GG GG + GGGG
Sbjct: 18 GGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGG 61
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 599 GGGXXXPPPPPXXXGGXG 546
GGG PPPPP GG G
Sbjct: 49 GGGCAPPPPPPACGGGCG 66
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 599 GGGXXXPPPPPXXXGGXG 546
GGG PPPPP GG G
Sbjct: 106 GGGCAPPPPPPACGGGCG 123
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +1
Query: 547 PXPPXXXGGGGGXXXPPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGGXXXXGG 726
P PP GGG G GGG GGGGG
Sbjct: 55 PPPPPACGGGCGGG----GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCA 110
Query: 727 PPPP 738
PPPP
Sbjct: 111 PPPP 114
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG GGG GG G GG GGGG PPPPP
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGG-GGGCGGGGGCGGGCAPPPPP 115
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein
15, isoform a protein.
Length = 780
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -2
Query: 854 GTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXP 705
G+ GG G P P G PP GG P G G P P
Sbjct: 200 GSSQMNGGPAMGQPPPQMGAPNMGGPPNGYGGYGMMNGPPGSGAPMGGNP 249
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -2
Query: 854 GTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXP 705
G+ GG G P P G PP GG P G G P P
Sbjct: 197 GSSQMNGGPAMGQPPPQMGAPNMGGPPNGYGGYGMMNGPPGSGAPMGGNP 246
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 599 GGGXXXPPPPPXXXGGXG 546
GGG PPPPP GG G
Sbjct: 39 GGGCCAPPPPPPVCGGCG 56
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 599 GGGXXXPPPPPXXXGGXG 546
GGG PPPPP GG G
Sbjct: 25 GGGCCAPPPPPPCGGGCG 42
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGP 723
GG GGG RG R GG GG + GGGGP
Sbjct: 224 GGDRYGGGGGRRGSPDRRGGFRSGGG-----GGGYMRSGGGGGGP 263
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = -2
Query: 707 PPPPPXXXXXXXXXXXXXXXXXXXXXXXXGXXXPPPGGGXXXPPPPPXXXGGXG 546
PPPPP P G G PPPPP G G
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = -2
Query: 707 PPPPPXXXXXXXXXXXXXXXXXXXXXXXXGXXXPPPGGGXXXPPPPPXXXGGXG 546
PPPPP P G G PPPPP G G
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/91 (26%), Positives = 24/91 (26%)
Frame = -2
Query: 818 GXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXX 639
G P P PP G PG GP PP PP
Sbjct: 144 GPPGQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGPIGPPGPP----GQAGAPGEPGSPAK 199
Query: 638 XXXXXXGXXXPPPGGGXXXPPPPPXXXGGXG 546
G PP G PP PP G G
Sbjct: 200 SEPAVPGPPGPPGQAGQQGPPGPPGSNGIDG 230
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG+ G + G P P GA P P GGPP P PP
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG+ G + G P P GA P P GGPP P PP
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG+ G + G P P GA P P GGPP P PP
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = -2
Query: 857 GGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
GG+ G + G P P GA P P GGPP P PP
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/83 (25%), Positives = 21/83 (25%)
Frame = -2
Query: 794 PXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGX 615
P PP G PG G P PP PP
Sbjct: 162 PGPNGPPGYEGQMGVPGLPGDGPTPGSPGPPGPPGPPGYPGRQGCQGKDGPSGDPGLRFI 221
Query: 614 XXPPPGGGXXXPPPPPXXXGGXG 546
P P G PP PP G G
Sbjct: 222 KTPGPVGA-AGPPGPPGPPGSPG 243
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -2
Query: 794 PXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
P G A PP G PG GPP P P
Sbjct: 230 PPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAP 263
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 605 PPGGGXXXPPPPPXXXGGXG 546
P GGG P PPP GG G
Sbjct: 264 PMGGGGGYPQPPPQQGGGGG 283
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 608 PPPGGGXXXPPPPP 567
PP GGG PPPPP
Sbjct: 45 PPCGGGYEAPPPPP 58
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -2
Query: 794 PXGGAPPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
P G A PP G PG GPP P P
Sbjct: 229 PPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAP 262
>U80437-4|AAK68244.1| 90|Caenorhabditis elegans Neurabin protein
1, isoform c protein.
Length = 90
Score = 28.7 bits (61), Expect = 6.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 816 PPPXPPSXPXXCPP 857
PPP PP P CPP
Sbjct: 45 PPPLPPKPPSQCPP 58
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 28.7 bits (61), Expect = 6.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 816 PPPXPPSXPXXCPP 857
PPP PP P CPP
Sbjct: 45 PPPLPPKPPSQCPP 58
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 28.7 bits (61), Expect = 6.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 816 PPPXPPSXPXXCPP 857
PPP PP P CPP
Sbjct: 45 PPPLPPKPPSQCPP 58
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 28.7 bits (61), Expect = 6.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 816 PPPXPPSXPXXCPP 857
PPP PP P CPP
Sbjct: 45 PPPLPPKPPSQCPP 58
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = -2
Query: 728 GPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGXXXPPPGGGXXXPPPPP 567
GPP PPPP PPP PPPPP
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 28.3 bits (60), Expect = 8.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 816 PPPXPPSXPXXCPP 857
PPP PP P CPP
Sbjct: 63 PPPPPPPPPPMCPP 76
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = -2
Query: 737 GGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGXXXPPPGGGXXXPPPP 570
G GGPP PP PPGGG PPPP
Sbjct: 629 GPGGPPQQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPPP 684
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = -2
Query: 737 GGGGPPXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXXGXXXPPPGGGXXXPPPP 570
G GGPP PP PPGGG PPPP
Sbjct: 629 GPGGPPQQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPPP 684
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 24.6 bits (51), Expect(2) = 7.2
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -2
Query: 779 PPPXXGGXFXXXXPGGGGPPXXXXPPPPP 693
PP G PG GP PPPP
Sbjct: 185 PPGPDGNAGPAGAPGVPGPDGDAGSPPPP 213
Score = 22.2 bits (45), Expect(2) = 7.2
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -2
Query: 605 PPGGGXXXPPPPPXXXGGXG 546
PP G PP PP G G
Sbjct: 210 PPPPGPPGPPGPPGNDGQPG 229
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 833 GGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGGPPXXXXPP 702
GG G P P G A P G PG GPP P
Sbjct: 230 GGEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGPKGPPGPAGQP 273
>AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin
protein.
Length = 377
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 782 APPPXXGGXFXXXXPGGGGPPXXXXPPP 699
A PP GG P GPP PPP
Sbjct: 285 AMPPQNGGGITQAPPSYQGPPPGGLPPP 312
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 785 GAPPPXXGGXFXXXXPGGGGPPXXXXPPPP 696
GAPPP G F GPP P PP
Sbjct: 112 GAPPPAHHGHFGPPGHHFQGPPQHFPPGPP 141
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/15 (73%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = -2
Query: 608 PPPGG-GXXXPPPPP 567
PPPGG G PPPPP
Sbjct: 664 PPPGGLGGFMPPPPP 678
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 890 GXXXGXXXXXXGGTXXXXGGGXRGGXPRXXXXPXGGAPPPXXGGXFXXXXPGGGG 726
G G GG GGG RGG R GG GG GGGG
Sbjct: 119 GNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGG---DWGGNGGGGRGGGGG 170
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/15 (73%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = -2
Query: 608 PPPGG-GXXXPPPPP 567
PPPGG G PPPPP
Sbjct: 664 PPPGGLGGFMPPPPP 678
>AF067617-3|ABQ13062.1| 102|Caenorhabditis elegans Uncoordinated
protein 57, isoform b protein.
Length = 102
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 782 APPPXXGGXFXXXXPGGGGPPXXXXPPP 699
A PP GG P GPP PPP
Sbjct: 10 AMPPQNGGGITQAPPSYQGPPPGGLPPP 37
>AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated
protein 57, isoform a protein.
Length = 377
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 782 APPPXXGGXFXXXXPGGGGPPXXXXPPP 699
A PP GG P GPP PPP
Sbjct: 285 AMPPQNGGGITQAPPSYQGPPPGGLPPP 312
>AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated
protein 57, isoform c protein.
Length = 379
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 782 APPPXXGGXFXXXXPGGGGPPXXXXPPP 699
A PP GG P GPP PPP
Sbjct: 287 AMPPQNGGGITQAPPSYQGPPPGGLPPP 314
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 694 GGGGGXXXXGGPPPP 738
GGGGG G PPPP
Sbjct: 23 GGGGGGCGCGAPPPP 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,875,825
Number of Sequences: 27780
Number of extensions: 213123
Number of successful extensions: 2710
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2006
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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