Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L09
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.      30   2.6  
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein...    30   2.6  
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein...    30   2.6  

>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -3

Query: 267 RCNRVYLRRILSSP*NIGALQKQHRRTLRLKTGMRWRFPNVSCPHE 130
           R N +YLR++L +  +  +L    RR++   +    +F N+ CP+E
Sbjct: 165 RKNAIYLRKLLLTELDSNSLLTNIRRSVNSYSFSNVKFTNIVCPNE 210


>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -3

Query: 267 RCNRVYLRRILSSP*NIGALQKQHRRTLRLKTGMRWRFPNVSCPHE 130
           R N +YLR++L +  +  +L    RR++   +    +F N+ CP+E
Sbjct: 165 RKNAIYLRKLLLTELDSNSLLTNIRRSVNSYSFSNVKFTNIVCPNE 210


>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
          Length = 1440

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -3

Query: 267 RCNRVYLRRILSSP*NIGALQKQHRRTLRLKTGMRWRFPNVSCPHE 130
           R N +YLR++L +  +  +L    RR++   +    +F N+ CP+E
Sbjct: 165 RKNAIYLRKLLLTELDSNSLLTNIRRSVNSYSFSNVKFTNIVCPNE 210


>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -3

Query: 267 RCNRVYLRRILSSP*NIGALQKQHRRTLRLKTGMRWRFPNVSCPHE 130
           R N +YLR++L +  +  +L    RR++   +    +F N+ CP+E
Sbjct: 165 RKNAIYLRKLLLTELDSNSLLTNIRRSVNSYSFSNVKFTNIVCPNE 210


>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -3

Query: 267 RCNRVYLRRILSSP*NIGALQKQHRRTLRLKTGMRWRFPNVSCPHE 130
           R N +YLR++L +  +  +L    RR++   +    +F N+ CP+E
Sbjct: 165 RKNAIYLRKLLLTELDSNSLLTNIRRSVNSYSFSNVKFTNIVCPNE 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,278,244
Number of Sequences: 27780
Number of extensions: 201676
Number of successful extensions: 376
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)