Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L08
         (854 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.1  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.1  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   7.1  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   7.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   7.1  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 605 KKCFICEICDAIALFVTIISCNKQVN 682
           K C +C+  + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 628 NFTNKAFFSLH 596
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 628 NFTNKAFFSLH 596
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 131 TLKPXVCTNCARCVPKXKA-IKKFVXRXI 214
           T+   + T+CA+C  K KA ++K +   I
Sbjct: 61  TIPEALSTDCAKCNEKVKANVRKVLHHLI 89


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 152 TNCARCVPKXKAIKKFVXRXIV 217
           T+C++C  K K    F+ R ++
Sbjct: 75  TDCSKCSEKQKEGSDFIMRYLI 96


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 638 IALFVTIISCNKQVNNNNCIHFMFQ 712
           +A+F+    C++    +NC+   FQ
Sbjct: 327 LAIFILYFICDEAHYASNCLRVQFQ 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,337
Number of Sequences: 336
Number of extensions: 2276
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)