Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L08
         (854 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...   158   2e-40
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       25   2.9  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score =  158 bits (384), Expect = 2e-40
 Identities = 74/97 (76%), Positives = 82/97 (84%)
 Frame = +2

Query: 134 LKPXVCTNCARCVPKXKAIKKFVXRXIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 313
           +K   CTNCARCVPK KAIKKFV R IV AAAVRDI+DASVY  + LPKLYAKLHYCVSC
Sbjct: 17  VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSC 76

Query: 314 AIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 424
           AIHSKVVRNRSK+ RRIRTPP+ +FP+DM+R Q  QR
Sbjct: 77  AIHSKVVRNRSKETRRIRTPPQRSFPKDMNRQQNAQR 113



 Score = 37.5 bits (83), Expect = 5e-04
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +1

Query: 91  KRRNGGRAKHGRGHVKAV 144
           +RRNGGR KH RGHVKAV
Sbjct: 3   ERRNGGRCKHNRGHVKAV 20


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 563 YIDEFGQTTTKMQ*KKCFICEICDAIALFVT 655
           ++D  GQ T + +  KCF C +   + L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,288
Number of Sequences: 2352
Number of extensions: 11097
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)